RNA–Protein interactions for RNA: ENST00000488596.5

CD46-215, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 872 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-215ENST00000488596 IGFL4Q6B9Z1 124 aa4.72□□□□□ -1.65
CD46-215ENST00000488596 SLC7A14Q8TBB6 771 aa4.72□□□□□ -1.65
CD46-215ENST00000488596 LRRC37BQ96QE4 947 aa4.72□□□□□ -1.65
CD46-215ENST00000488596 LMF1Q96S06 567 aa4.72□□□□□ -1.65
CD46-215ENST00000488596 PHF20Q9BVI0 1012 aa4.72□□□□□ -1.65
CD46-215ENST00000488596 PDGFDQ9GZP0 370 aaPredicted RBP4.72□□□□□ -1.65
CD46-215ENST00000488596 KATNBL1Q9H079 304 aa4.72□□□□□ -1.65
CD46-215ENST00000488596 NCOA5Q9HCD5 579 aaKnown RBP4.72□□□□□ -1.65
CD46-215ENST00000488596 ZFR2Q9UPR6 939 aaKnown RBP4.72□□□□□ -1.65
CD46-215ENST00000488596 PLSCR1O15162 318 aa4.71□□□□□ -1.66
CD46-215ENST00000488596 NKRFO15226 690 aaKnown RBP eCLIP4.71□□□□□ -1.66
CD46-215ENST00000488596 CLSTN1O94985 981 aa4.71□□□□□ -1.66
CD46-215ENST00000488596 ENO2P09104 434 aaPredicted RBP4.71□□□□□ -1.66
CD46-215ENST00000488596 ZNF888P0CJ79 500 aaPredicted RBP4.71□□□□□ -1.66
CD46-215ENST00000488596 FOXE3Q13461 319 aa4.71□□□□□ -1.66
CD46-215ENST00000488596 TCEA2Q15560 299 aa4.71□□□□□ -1.66
CD46-215ENST00000488596 CD276Q5ZPR3 534 aa4.71□□□□□ -1.66
CD46-215ENST00000488596 KIAA0907Q7Z7F0 614 aaPredicted RBP4.71□□□□□ -1.66
CD46-215ENST00000488596 TAX1BP1Q86VP1 789 aa4.71□□□□□ -1.66
CD46-215ENST00000488596 DHX37Q8IY37 1157 aaKnown RBP4.71□□□□□ -1.66
CD46-215ENST00000488596 UHMK1Q8TAS1 419 aaKnown RBP4.71□□□□□ -1.66
CD46-215ENST00000488596 ADOQ96SZ5 270 aa4.71□□□□□ -1.66
CD46-215ENST00000488596 ZNF341Q9BYN7 854 aa4.71□□□□□ -1.66
CD46-215ENST00000488596 SLC52A2Q9HAB3 445 aa4.71□□□□□ -1.66
CD46-215ENST00000488596 ARHGAP20Q9P2F6 1191 aa4.71□□□□□ -1.66
CD46-215ENST00000488596 NDOR1Q9UHB4 597 aa4.71□□□□□ -1.66
CD46-215ENST00000488596 LOC101059915A0A1B0GWI6 518 aaPredicted RBP4.7□□□□□ -1.66
CD46-215ENST00000488596 ACOT7O00154 380 aa4.7□□□□□ -1.66
CD46-215ENST00000488596 PLD2O14939 933 aa4.7□□□□□ -1.66
CD46-215ENST00000488596 SDSP20132 328 aa4.7□□□□□ -1.66
CD46-215ENST00000488596 GRK2P25098 689 aa4.7□□□□□ -1.66
CD46-215ENST00000488596 GRK3P35626 688 aa4.7□□□□□ -1.66
CD46-215ENST00000488596 PABPC4Q13310 644 aaKnown RBP eCLIP4.7□□□□□ -1.66
CD46-215ENST00000488596 PRKD1Q15139 912 aaPredicted RBP4.7□□□□□ -1.66
CD46-215ENST00000488596 DALRD3Q5D0E6 543 aaKnown RBP4.7□□□□□ -1.66
CD46-215ENST00000488596 HABP4Q5JVS0 413 aaKnown RBP4.7□□□□□ -1.66
CD46-215ENST00000488596 RSPO2Q6UXX9 243 aaPredicted RBP4.7□□□□□ -1.66
CD46-215ENST00000488596 LBX2Q6XYB7 198 aa4.7□□□□□ -1.66
CD46-215ENST00000488596 GIMAP8Q8ND71 665 aaPredicted RBP4.7□□□□□ -1.66
CD46-215ENST00000488596 DCAF4Q8WV16 495 aa4.7□□□□□ -1.66
CD46-215ENST00000488596 ZNF503Q96F45 646 aa4.7□□□□□ -1.66
CD46-215ENST00000488596 KCNJ15Q99712 375 aa4.7□□□□□ -1.66
CD46-215ENST00000488596 TACO1Q9BSH4 297 aaKnown RBP4.7□□□□□ -1.66
CD46-215ENST00000488596 PCDHA9Q9Y5H5 950 aa4.7□□□□□ -1.66
CD46-215ENST00000488596 ZNF839A8K0R7 811 aa4.69□□□□□ -1.66
CD46-215ENST00000488596 GABREP78334 506 aa4.69□□□□□ -1.66
CD46-215ENST00000488596 FNDC3BQ53EP0 1204 aaKnown RBP4.69□□□□□ -1.66
CD46-215ENST00000488596 USP39Q53GS9 565 aaKnown RBP4.69□□□□□ -1.66
CD46-215ENST00000488596 HS1BP3Q53T59 392 aa4.69□□□□□ -1.66
CD46-215ENST00000488596 MIIPQ5JXC2 388 aa4.69□□□□□ -1.66
CD46-215ENST00000488596 AGBL4Q5VU57 503 aa4.69□□□□□ -1.66
CD46-215ENST00000488596 FGD2Q7Z6J4 655 aa4.69□□□□□ -1.66
CD46-215ENST00000488596 PNPLA5Q7Z6Z6 429 aaPredicted RBP4.69□□□□□ -1.66
CD46-215ENST00000488596 FUKQ8N0W3 1084 aa4.69□□□□□ -1.66
CD46-215ENST00000488596 PTPRN2Q92932 1015 aa4.69□□□□□ -1.66
CD46-215ENST00000488596 EXTL1Q92935 676 aa4.69□□□□□ -1.66
CD46-215ENST00000488596 NEIL1Q96FI4 390 aaPredicted RBP4.69□□□□□ -1.66
CD46-215ENST00000488596 SCLYQ96I15 445 aa4.69□□□□□ -1.66
CD46-215ENST00000488596 FEZ1Q99689 392 aa4.69□□□□□ -1.66
CD46-215ENST00000488596 MRPL4Q9BYD3 311 aaKnown RBP4.69□□□□□ -1.66
CD46-215ENST00000488596 PCDHA8Q9Y5H6 950 aa4.69□□□□□ -1.66
CD46-215ENST00000488596 H0Y858 1186 aa4.68□□□□□ -1.66
CD46-215ENST00000488596 RASGRP1O95267 797 aa4.68□□□□□ -1.66
CD46-215ENST00000488596 CRTAMO95727 393 aa4.68□□□□□ -1.66
CD46-215ENST00000488596 GNAT1P11488 350 aa4.68□□□□□ -1.66
CD46-215ENST00000488596 EPHA5P54756 1037 aa4.68□□□□□ -1.66
CD46-215ENST00000488596 SPIRE1Q08AE8 756 aa4.68□□□□□ -1.66
CD46-215ENST00000488596 FHL2Q14192 279 aa4.68□□□□□ -1.66
CD46-215ENST00000488596 USP10Q14694 798 aaKnown RBP4.68□□□□□ -1.66
CD46-215ENST00000488596 NOLC1Q14978 699 aaKnown RBP eCLIP4.68□□□□□ -1.66
CD46-215ENST00000488596 NRN1LQ496H8 165 aa4.68□□□□□ -1.66
CD46-215ENST00000488596 STYK1Q6J9G0 422 aa4.68□□□□□ -1.66
CD46-215ENST00000488596 RNF207Q6ZRF8 634 aa4.68□□□□□ -1.66
CD46-215ENST00000488596 Q6ZSN1 163 aa4.68□□□□□ -1.66
CD46-215ENST00000488596 BRAPQ7Z569 592 aa4.68□□□□□ -1.66
CD46-215ENST00000488596 REXO1L1PQ8IX06 675 aa4.68□□□□□ -1.66
CD46-215ENST00000488596 IFNL2Q8IZJ0 200 aa4.68□□□□□ -1.66
CD46-215ENST00000488596 SYNPOQ8N3V7 929 aa4.68□□□□□ -1.66
CD46-215ENST00000488596 EDAQ92838 391 aa4.68□□□□□ -1.66
CD46-215ENST00000488596 SLKQ9H2G2 1235 aaPredicted RBP4.68□□□□□ -1.66
CD46-215ENST00000488596 SLC39A2Q9NP94 309 aa4.68□□□□□ -1.66
CD46-215ENST00000488596 SFMBT1Q9UHJ3 866 aa4.68□□□□□ -1.66
CD46-215ENST00000488596 DSEQ9UL01 958 aa4.68□□□□□ -1.66
CD46-215ENST00000488596 ANKRD62A6NC57 917 aa4.67□□□□□ -1.66
CD46-215ENST00000488596 RFPL3O75679 317 aa4.67□□□□□ -1.66
CD46-215ENST00000488596 COMTP21964 271 aa4.67□□□□□ -1.66
CD46-215ENST00000488596 DGCR2P98153 550 aa4.67□□□□□ -1.66
CD46-215ENST00000488596 PURAQ00577 322 aaKnown RBP4.67□□□□□ -1.66
CD46-215ENST00000488596 GUCY1A3Q02108 690 aa4.67□□□□□ -1.66
CD46-215ENST00000488596 RNF151Q2KHN1 245 aa4.67□□□□□ -1.66
CD46-215ENST00000488596 KIZQ2M2Z5 673 aa4.67□□□□□ -1.66
CD46-215ENST00000488596 TRIM61Q5EBN2 209 aa4.67□□□□□ -1.66
CD46-215ENST00000488596 CNNM4Q6P4Q7 775 aa4.67□□□□□ -1.66
CD46-215ENST00000488596 KCTD1Q719H9 257 aa4.67□□□□□ -1.66
CD46-215ENST00000488596 NIM1KQ8IY84 436 aa4.67□□□□□ -1.66
CD46-215ENST00000488596 IFNL3Q8IZI9 196 aa4.67□□□□□ -1.66
CD46-215ENST00000488596 GSTCDQ8NEC7 633 aa4.67□□□□□ -1.66
CD46-215ENST00000488596 SH3RF2Q8TEC5 729 aa4.67□□□□□ -1.66
CD46-215ENST00000488596 NINJ1Q92982 152 aa4.67□□□□□ -1.66
CD46-215ENST00000488596 MAGEB10Q96LZ2 347 aaPredicted RBP4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms