RNA–Protein interactions for RNA: ENST00000488463.5

COL9A2-208, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 5

Gene COL9A2, Length 1,005 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-208ENST00000488463 WNT7AO00755 349 aa16.07■□□□□ 0.16
COL9A2-208ENST00000488463 ZNF862O60290 1169 aa16.07■□□□□ 0.16
COL9A2-208ENST00000488463 BAIAP3O94812 1187 aa16.07■□□□□ 0.16
COL9A2-208ENST00000488463 CHRNA1P02708 482 aa16.07■□□□□ 0.16
COL9A2-208ENST00000488463 KRT2P35908 639 aa16.07■□□□□ 0.16
COL9A2-208ENST00000488463 LETM2Q2VYF4 491 aa16.07■□□□□ 0.16
COL9A2-208ENST00000488463 PLEKHG4Q58EX7 1191 aa16.07■□□□□ 0.16
COL9A2-208ENST00000488463 LRCH2Q5VUJ6 765 aa16.07■□□□□ 0.16
COL9A2-208ENST00000488463 TAF2Q6P1X5 1199 aa16.07■□□□□ 0.16
COL9A2-208ENST00000488463 CNKSR3Q6P9H4 555 aa16.07■□□□□ 0.16
COL9A2-208ENST00000488463 NEK8Q86SG6 692 aa16.07■□□□□ 0.16
COL9A2-208ENST00000488463 HAS1Q92839 578 aa16.07■□□□□ 0.16
COL9A2-208ENST00000488463 FTOQ9C0B1 505 aaKnown RBP eCLIP16.07■□□□□ 0.16
COL9A2-208ENST00000488463 MTIF3Q9H2K0 278 aaKnown RBP16.07■□□□□ 0.16
COL9A2-208ENST00000488463 DDX25Q9UHL0 483 aaKnown RBP16.07■□□□□ 0.16
COL9A2-208ENST00000488463 TRPC6Q9Y210 931 aa16.07■□□□□ 0.16
COL9A2-208ENST00000488463 YBX2Q9Y2T7 364 aaKnown RBP16.07■□□□□ 0.16
COL9A2-208ENST00000488463 SLC4A7Q9Y6M7 1214 aa16.07■□□□□ 0.16
COL9A2-208ENST00000488463 TMEM265A0A087WTH1 108 aa16.06■□□□□ 0.16
COL9A2-208ENST00000488463 WDR64B1ANS9 1081 aa16.06■□□□□ 0.16
COL9A2-208ENST00000488463 BACH1O14867 736 aa16.06■□□□□ 0.16
COL9A2-208ENST00000488463 GAS7O60861 476 aa16.06■□□□□ 0.16
COL9A2-208ENST00000488463 CTSHP09668 335 aa16.06■□□□□ 0.16
COL9A2-208ENST00000488463 ACTN1P12814 892 aa16.06■□□□□ 0.16
COL9A2-208ENST00000488463 IGBP1P78318 339 aa16.06■□□□□ 0.16
COL9A2-208ENST00000488463 UGCGQ16739 394 aa16.06■□□□□ 0.16
COL9A2-208ENST00000488463 FAM160B1Q5W0V3 765 aa16.06■□□□□ 0.16
COL9A2-208ENST00000488463 PDXDC2PQ6P474 469 aa16.06■□□□□ 0.16
COL9A2-208ENST00000488463 DIS3L2Q8IYB7 885 aaKnown RBP16.06■□□□□ 0.16
COL9A2-208ENST00000488463 DISC1Q9NRI5 854 aa16.06■□□□□ 0.16
COL9A2-208ENST00000488463 VAV3Q9UKW4 847 aa16.06■□□□□ 0.16
COL9A2-208ENST00000488463 PCDHA2Q9Y5H9 948 aa16.06■□□□□ 0.16
COL9A2-208ENST00000488463 COL1A2P08123 1366 aa16.05■□□□□ 0.16
COL9A2-208ENST00000488463 ZBBXA8MT70 800 aa16.05■□□□□ 0.16
COL9A2-208ENST00000488463 HBP1O60381 514 aa16.05■□□□□ 0.16
COL9A2-208ENST00000488463 STBD1O95210 358 aa16.05■□□□□ 0.16
COL9A2-208ENST00000488463 PSAPP07602 524 aa16.05■□□□□ 0.16
COL9A2-208ENST00000488463 GCFC2P16383 781 aaKnown RBP16.05■□□□□ 0.16
COL9A2-208ENST00000488463 ATP2A2P16615 1042 aaKnown RBP16.05■□□□□ 0.16
COL9A2-208ENST00000488463 FOSBP53539 338 aa16.05■□□□□ 0.16
COL9A2-208ENST00000488463 RABGGTBP53611 331 aa16.05■□□□□ 0.16
COL9A2-208ENST00000488463 WDR5P61964 334 aaKnown RBP16.05■□□□□ 0.16
COL9A2-208ENST00000488463 ZNF697Q5TEC3 545 aa16.05■□□□□ 0.16
COL9A2-208ENST00000488463 MTHFD1LQ6UB35 978 aa16.05■□□□□ 0.16
COL9A2-208ENST00000488463 DBF4BQ8NFT6 615 aa16.05■□□□□ 0.16
COL9A2-208ENST00000488463 PHOSPHO2Q8TCD6 241 aa16.05■□□□□ 0.16
COL9A2-208ENST00000488463 DNAJB3Q8WWF6 145 aa16.05■□□□□ 0.16
COL9A2-208ENST00000488463 FAM161BQ96MY7 647 aa16.05■□□□□ 0.16
COL9A2-208ENST00000488463 TEKT3Q9BXF9 490 aa16.05■□□□□ 0.16
COL9A2-208ENST00000488463 BACH2Q9BYV9 841 aa16.05■□□□□ 0.16
COL9A2-208ENST00000488463 GABBR1Q9UBS5 961 aa16.05■□□□□ 0.16
COL9A2-208ENST00000488463 SMIM35A0A1B0GVV1 85 aa16.04■□□□□ 0.16
COL9A2-208ENST00000488463 MYOGP15173 224 aa16.04■□□□□ 0.16
COL9A2-208ENST00000488463 SFNP31947 248 aa16.04■□□□□ 0.16
COL9A2-208ENST00000488463 JAK3P52333 1124 aa16.04■□□□□ 0.16
COL9A2-208ENST00000488463 DEFB103AP81534 67 aa16.04■□□□□ 0.16
COL9A2-208ENST00000488463 ZNF484Q5JVG2 852 aa16.04■□□□□ 0.16
COL9A2-208ENST00000488463 IL27Q8NEV9 243 aa16.04■□□□□ 0.16
COL9A2-208ENST00000488463 FBXO18Q8NFZ0 1043 aa16.04■□□□□ 0.16
COL9A2-208ENST00000488463 RDM1Q8NG50 284 aa16.04■□□□□ 0.16
COL9A2-208ENST00000488463 BBXQ8WY36 941 aaPredicted RBP16.04■□□□□ 0.16
COL9A2-208ENST00000488463 TIFAQ96CG3 184 aa16.04■□□□□ 0.16
COL9A2-208ENST00000488463 FAM20AQ96MK3 541 aa16.04■□□□□ 0.16
COL9A2-208ENST00000488463 SLC9A7Q96T83 725 aa16.04■□□□□ 0.16
COL9A2-208ENST00000488463 ABHD14A-ACY1A0A1B0GW23 586 aa16.03■□□□□ 0.16
COL9A2-208ENST00000488463 EML1O00423 815 aa16.03■□□□□ 0.16
COL9A2-208ENST00000488463 TBX3O15119 743 aa16.03■□□□□ 0.16
COL9A2-208ENST00000488463 CHMP2AO43633 222 aa16.03■□□□□ 0.16
COL9A2-208ENST00000488463 CCNT1O60563 726 aaKnown RBP16.03■□□□□ 0.16
COL9A2-208ENST00000488463 C22orf31O95567 290 aa16.03■□□□□ 0.16
COL9A2-208ENST00000488463 KLRC1P26715 233 aa16.03■□□□□ 0.16
COL9A2-208ENST00000488463 HMGN5P82970 282 aaKnown RBP16.03■□□□□ 0.16
COL9A2-208ENST00000488463 GUCY1B3Q02153 619 aa16.03■□□□□ 0.16
COL9A2-208ENST00000488463 SPIRE1Q08AE8 756 aa16.03■□□□□ 0.16
COL9A2-208ENST00000488463 PPP2R5CQ13362 524 aa16.03■□□□□ 0.16
COL9A2-208ENST00000488463 LPIN1Q14693 890 aa16.03■□□□□ 0.16
COL9A2-208ENST00000488463 TMCO2Q7Z6W1 182 aaPredicted RBP16.03■□□□□ 0.16
COL9A2-208ENST00000488463 POTEDQ86YR6 584 aa16.03■□□□□ 0.16
COL9A2-208ENST00000488463 HERC6Q8IVU3 1022 aa16.03■□□□□ 0.16
COL9A2-208ENST00000488463 KIAA0319LQ8IZA0 1049 aa16.03■□□□□ 0.16
COL9A2-208ENST00000488463 LINC01465Q8N7H1 131 aa16.03■□□□□ 0.16
COL9A2-208ENST00000488463 TNPO1Q92973 898 aaKnown RBP16.03■□□□□ 0.16
COL9A2-208ENST00000488463 TMX3Q96JJ7 454 aa16.03■□□□□ 0.16
COL9A2-208ENST00000488463 CEP89Q96ST8 783 aa16.03■□□□□ 0.16
COL9A2-208ENST00000488463 UPF2Q9HAU5 1272 aaKnown RBP16.03■□□□□ 0.16
COL9A2-208ENST00000488463 BRMS1Q9HCU9 246 aa16.03■□□□□ 0.16
COL9A2-208ENST00000488463 PCDHA11Q9Y5I1 949 aa16.03■□□□□ 0.16
COL9A2-208ENST00000488463 VCANP13611 3396 aa16.03■□□□□ 0.16
COL9A2-208ENST00000488463 ST18O60284 1047 aa16.02■□□□□ 0.16
COL9A2-208ENST00000488463 ARHGEF15O94989 841 aa16.02■□□□□ 0.16
COL9A2-208ENST00000488463 MRPS6P82932 125 aaKnown RBP16.02■□□□□ 0.16
COL9A2-208ENST00000488463 PRKCEQ02156 737 aa16.02■□□□□ 0.16
COL9A2-208ENST00000488463 GRIN2CQ14957 1233 aa16.02■□□□□ 0.16
COL9A2-208ENST00000488463 TARBP2Q15633 366 aaKnown RBP16.02■□□□□ 0.16
COL9A2-208ENST00000488463 RAB30Q15771 203 aa16.02■□□□□ 0.16
COL9A2-208ENST00000488463 FBXO47Q5MNV8 452 aa16.02■□□□□ 0.16
COL9A2-208ENST00000488463 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.02■□□□□ 0.16
COL9A2-208ENST00000488463 C8orf76Q96K31 380 aa16.02■□□□□ 0.16
COL9A2-208ENST00000488463 CDX2Q99626 313 aaPredicted RBP16.02■□□□□ 0.16
COL9A2-208ENST00000488463 FAM49AQ9H0Q0 323 aaPredicted RBP16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms