RNA–Protein interactions for RNA: ENST00000488384.1

ERGIC3-216, Transcript of ERGIC and golgi 3, humanhuman

TSL 2

Gene ERGIC3, Length 766 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-216ENST00000488384 SLFN12Q8IYM2 578 aa18.04■□□□□ 0.48
ERGIC3-216ENST00000488384 TRAPPC12Q8WVT3 735 aa18.04■□□□□ 0.48
ERGIC3-216ENST00000488384 ZBTB10Q96DT7 871 aa18.04■□□□□ 0.48
ERGIC3-216ENST00000488384 RRN3P2A6NIE6 340 aa18.03■□□□□ 0.48
ERGIC3-216ENST00000488384 ZBTB42B2RXF5 422 aa18.03■□□□□ 0.48
ERGIC3-216ENST00000488384 RBAK-RBAKDNI3L0D1 243 aa18.03■□□□□ 0.48
ERGIC3-216ENST00000488384 HBP1O60381 514 aa18.03■□□□□ 0.48
ERGIC3-216ENST00000488384 MCM7P33993 719 aa18.03■□□□□ 0.48
ERGIC3-216ENST00000488384 RFC2P35250 354 aa18.03■□□□□ 0.48
ERGIC3-216ENST00000488384 THPOP40225 353 aa18.03■□□□□ 0.48
ERGIC3-216ENST00000488384 TRAPPC10P48553 1259 aa18.03■□□□□ 0.48
ERGIC3-216ENST00000488384 PRKCEQ02156 737 aa18.03■□□□□ 0.48
ERGIC3-216ENST00000488384 MBTPS1Q14703 1052 aa18.03■□□□□ 0.48
ERGIC3-216ENST00000488384 GPNMBQ14956 572 aa18.03■□□□□ 0.48
ERGIC3-216ENST00000488384 CALCRLQ16602 461 aa18.03■□□□□ 0.48
ERGIC3-216ENST00000488384 ZNF618Q5T7W0 954 aa18.03■□□□□ 0.48
ERGIC3-216ENST00000488384 MTMR9Q96QG7 549 aa18.03■□□□□ 0.48
ERGIC3-216ENST00000488384 TMEM60Q9H2L4 133 aa18.03■□□□□ 0.48
ERGIC3-216ENST00000488384 COL1A2P08123 1366 aa18.03■□□□□ 0.48
ERGIC3-216ENST00000488384 SIP14410 1827 aa18.02■□□□□ 0.48
ERGIC3-216ENST00000488384 H3BQV1 296 aa18.02■□□□□ 0.48
ERGIC3-216ENST00000488384 CAND2O75155 1236 aa18.02■□□□□ 0.48
ERGIC3-216ENST00000488384 ORC2Q13416 577 aaPredicted RBP18.02■□□□□ 0.48
ERGIC3-216ENST00000488384 NBR1Q14596 966 aa18.02■□□□□ 0.48
ERGIC3-216ENST00000488384 TTC38Q5R3I4 469 aa18.02■□□□□ 0.48
ERGIC3-216ENST00000488384 TAF2Q6P1X5 1199 aa18.02■□□□□ 0.48
ERGIC3-216ENST00000488384 ZNF365Q70YC5 407 aa18.02■□□□□ 0.48
ERGIC3-216ENST00000488384 DEFB128Q7Z7B8 93 aa18.02■□□□□ 0.48
ERGIC3-216ENST00000488384 CKAP2LQ8IYA6 745 aa18.02■□□□□ 0.48
ERGIC3-216ENST00000488384 BBXQ8WY36 941 aaPredicted RBP18.02■□□□□ 0.48
ERGIC3-216ENST00000488384 TNPO1Q92973 898 aaKnown RBP18.02■□□□□ 0.48
ERGIC3-216ENST00000488384 INTS4Q96HW7 963 aaKnown RBP18.02■□□□□ 0.48
ERGIC3-216ENST00000488384 FAM167AQ96KS9 214 aa18.02■□□□□ 0.48
ERGIC3-216ENST00000488384 RNPC3Q96LT9 517 aaKnown RBP18.02■□□□□ 0.48
ERGIC3-216ENST00000488384 NOL7Q9UMY1 257 aaKnown RBP18.02■□□□□ 0.48
ERGIC3-216ENST00000488384 TET1Q8NFU7 2136 aa18.02■□□□□ 0.47
ERGIC3-216ENST00000488384 MARCH6O60337 910 aa18.01■□□□□ 0.47
ERGIC3-216ENST00000488384 NBNO60934 754 aa18.01■□□□□ 0.47
ERGIC3-216ENST00000488384 BAG4O95429 457 aaKnown RBP18.01■□□□□ 0.47
ERGIC3-216ENST00000488384 OATP04181 439 aa18.01■□□□□ 0.47
ERGIC3-216ENST00000488384 PFKMP08237 780 aa18.01■□□□□ 0.47
ERGIC3-216ENST00000488384 CTSHP09668 335 aa18.01■□□□□ 0.47
ERGIC3-216ENST00000488384 TOB1P50616 345 aaPredicted RBP18.01■□□□□ 0.47
ERGIC3-216ENST00000488384 RASIP1Q5U651 963 aa18.01■□□□□ 0.47
ERGIC3-216ENST00000488384 LARP1BQ659C4 914 aaKnown RBP18.01■□□□□ 0.47
ERGIC3-216ENST00000488384 MCTP1Q6DN14 999 aa18.01■□□□□ 0.47
ERGIC3-216ENST00000488384 RPAINQ86UA6 219 aa18.01■□□□□ 0.47
ERGIC3-216ENST00000488384 CXCL10P02778 98 aa18■□□□□ 0.47
ERGIC3-216ENST00000488384 ZNF174Q15697 407 aa18■□□□□ 0.47
ERGIC3-216ENST00000488384 ZNF484Q5JVG2 852 aa18■□□□□ 0.47
ERGIC3-216ENST00000488384 NCAPH2Q6IBW4 605 aa18■□□□□ 0.47
ERGIC3-216ENST00000488384 MTHFD1LQ6UB35 978 aa18■□□□□ 0.47
ERGIC3-216ENST00000488384 TRMT1LQ7Z2T5 733 aaKnown RBP18■□□□□ 0.47
ERGIC3-216ENST00000488384 HSCBQ8IWL3 235 aa18■□□□□ 0.47
ERGIC3-216ENST00000488384 RPUSD2Q8IZ73 545 aaKnown RBP18■□□□□ 0.47
ERGIC3-216ENST00000488384 BANK1Q8NDB2 785 aa18■□□□□ 0.47
ERGIC3-216ENST00000488384 HERVK_113Q902F9 699 aa18■□□□□ 0.47
ERGIC3-216ENST00000488384 PCDHA2Q9Y5H9 948 aa18■□□□□ 0.47
ERGIC3-216ENST00000488384 RSPH10B2B2RC85 870 aa17.99■□□□□ 0.47
ERGIC3-216ENST00000488384 STBD1O95210 358 aa17.99■□□□□ 0.47
ERGIC3-216ENST00000488384 PARNO95453 639 aaKnown RBP17.99■□□□□ 0.47
ERGIC3-216ENST00000488384 C22orf31O95567 290 aa17.99■□□□□ 0.47
ERGIC3-216ENST00000488384 FGBP02675 491 aa17.99■□□□□ 0.47
ERGIC3-216ENST00000488384 OR52Z1P0C646 297 aa17.99■□□□□ 0.47
ERGIC3-216ENST00000488384 RSPH10BP0C881 870 aa17.99■□□□□ 0.47
ERGIC3-216ENST00000488384 TXKP42681 527 aa17.99■□□□□ 0.47
ERGIC3-216ENST00000488384 DNAJB3Q8WWF6 145 aa17.99■□□□□ 0.47
ERGIC3-216ENST00000488384 FAM49AQ9H0Q0 323 aaPredicted RBP17.99■□□□□ 0.47
ERGIC3-216ENST00000488384 TTC12Q9H892 705 aaPredicted RBP17.99■□□□□ 0.47
ERGIC3-216ENST00000488384 FOXD4L1Q9NU39 408 aa17.99■□□□□ 0.47
ERGIC3-216ENST00000488384 MTMR10Q9NXD2 777 aa17.99■□□□□ 0.47
ERGIC3-216ENST00000488384 CXXC1Q9P0U4 656 aaPredicted RBP17.99■□□□□ 0.47
ERGIC3-216ENST00000488384 WRAP73Q9P2S5 460 aaPredicted RBP17.99■□□□□ 0.47
ERGIC3-216ENST00000488384 PCDHA12Q9UN75 941 aa17.99■□□□□ 0.47
ERGIC3-216ENST00000488384 PCDHB6Q9Y5E3 794 aa17.99■□□□□ 0.47
ERGIC3-216ENST00000488384 KLRC1P26715 233 aa17.98■□□□□ 0.47
ERGIC3-216ENST00000488384 PSMC5P62195 406 aa17.98■□□□□ 0.47
ERGIC3-216ENST00000488384 MGAT3Q09327 533 aa17.98■□□□□ 0.47
ERGIC3-216ENST00000488384 EPHA7Q15375 998 aa17.98■□□□□ 0.47
ERGIC3-216ENST00000488384 TCTN1Q2MV58 587 aa17.98■□□□□ 0.47
ERGIC3-216ENST00000488384 FAM26DQ5JW98 314 aa17.98■□□□□ 0.47
ERGIC3-216ENST00000488384 OTOP2Q7RTS6 562 aa17.98■□□□□ 0.47
ERGIC3-216ENST00000488384 DEFB123Q8N688 67 aa17.98■□□□□ 0.47
ERGIC3-216ENST00000488384 OSBPL7Q9BZF2 842 aa17.98■□□□□ 0.47
ERGIC3-216ENST00000488384 SEPT9Q9UHD8 586 aaPredicted RBP17.98■□□□□ 0.47
ERGIC3-216ENST00000488384 CEP131Q9UPN4 1083 aa17.98■□□□□ 0.47
ERGIC3-216ENST00000488384 SMIM35A0A1B0GVV1 85 aa17.97■□□□□ 0.47
ERGIC3-216ENST00000488384 VPS37CA5D8V6 355 aaPredicted RBP17.97■□□□□ 0.47
ERGIC3-216ENST00000488384 TMEM150BA6NC51 233 aa17.97■□□□□ 0.47
ERGIC3-216ENST00000488384 POTEMA6NI47 508 aa17.97■□□□□ 0.47
ERGIC3-216ENST00000488384 CHRNA1P02708 482 aa17.97■□□□□ 0.47
ERGIC3-216ENST00000488384 PDCP20941 246 aa17.97■□□□□ 0.47
ERGIC3-216ENST00000488384 QARSP47897 775 aaKnown RBP17.97■□□□□ 0.47
ERGIC3-216ENST00000488384 XKR3Q5GH77 459 aa17.97■□□□□ 0.47
ERGIC3-216ENST00000488384 RSPH3Q86UC2 560 aa17.97■□□□□ 0.47
ERGIC3-216ENST00000488384 C4orf32Q8N8J7 132 aa17.97■□□□□ 0.47
ERGIC3-216ENST00000488384 LXNQ9BS40 222 aa17.97■□□□□ 0.47
ERGIC3-216ENST00000488384 FTOQ9C0B1 505 aaKnown RBP eCLIP17.97■□□□□ 0.47
ERGIC3-216ENST00000488384 RGL1Q9NZL6 768 aa17.97■□□□□ 0.47
ERGIC3-216ENST00000488384 RPLP2P05387 115 aaKnown RBP17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms