RNA–Protein interactions for RNA: ENST00000488320.1

COL17A1-207, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 5

Gene COL17A1, Length 626 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-207ENST00000488320 CA8P35219 290 aa10.71□□□□□ -0.69
COL17A1-207ENST00000488320 TCF7P36402 384 aaPredicted RBP10.71□□□□□ -0.69
COL17A1-207ENST00000488320 GHRHRQ02643 423 aa10.71□□□□□ -0.69
COL17A1-207ENST00000488320 TMEM62Q0P6H9 643 aa10.71□□□□□ -0.69
COL17A1-207ENST00000488320 NFX1Q12986 1120 aaKnown RBP10.71□□□□□ -0.69
COL17A1-207ENST00000488320 TRAF1Q13077 416 aa10.71□□□□□ -0.69
COL17A1-207ENST00000488320 CRIPAKQ8N1N5 446 aa10.71□□□□□ -0.69
COL17A1-207ENST00000488320 CASP10Q92851 521 aa10.71□□□□□ -0.69
COL17A1-207ENST00000488320 GLG1Q92896 1179 aa10.71□□□□□ -0.69
COL17A1-207ENST00000488320 VPS13AQ96RL7 3174 aa10.71□□□□□ -0.69
COL17A1-207ENST00000488320 TCF25Q9BQ70 676 aa10.71□□□□□ -0.69
COL17A1-207ENST00000488320 POMKQ9H5K3 350 aa10.71□□□□□ -0.69
COL17A1-207ENST00000488320 NGRNQ9NPE2 291 aaKnown RBP10.71□□□□□ -0.69
COL17A1-207ENST00000488320 CDH22Q9UJ99 828 aa10.71□□□□□ -0.69
COL17A1-207ENST00000488320 TELO2Q9Y4R8 837 aa10.71□□□□□ -0.69
COL17A1-207ENST00000488320 TRPV2Q9Y5S1 764 aa10.71□□□□□ -0.69
COL17A1-207ENST00000488320 SQORQ9Y6N5 450 aa10.71□□□□□ -0.69
COL17A1-207ENST00000488320 DNAH14Q0VDD8 3507 aa10.7□□□□□ -0.7
COL17A1-207ENST00000488320 FSCN2O14926 492 aa10.7□□□□□ -0.7
COL17A1-207ENST00000488320 ZBTB5O15062 677 aa10.7□□□□□ -0.7
COL17A1-207ENST00000488320 PI15O43692 258 aa10.7□□□□□ -0.7
COL17A1-207ENST00000488320 MTHFRP42898 656 aa10.7□□□□□ -0.7
COL17A1-207ENST00000488320 SARSP49591 514 aaKnown RBP10.7□□□□□ -0.7
COL17A1-207ENST00000488320 MRPS9P82933 396 aaKnown RBP10.7□□□□□ -0.7
COL17A1-207ENST00000488320 ITIH3Q06033 890 aa10.7□□□□□ -0.7
COL17A1-207ENST00000488320 KCNC3Q14003 757 aa10.7□□□□□ -0.7
COL17A1-207ENST00000488320 FAM102BQ5T8I3 360 aa10.7□□□□□ -0.7
COL17A1-207ENST00000488320 TMC7Q7Z402 723 aa10.7□□□□□ -0.7
COL17A1-207ENST00000488320 NLRX1Q86UT6 975 aa10.7□□□□□ -0.7
COL17A1-207ENST00000488320 HOMER1Q86YM7 354 aa10.7□□□□□ -0.7
COL17A1-207ENST00000488320 PLCD3Q8N3E9 789 aa10.7□□□□□ -0.7
COL17A1-207ENST00000488320 STAG2Q8N3U4 1231 aa10.7□□□□□ -0.7
COL17A1-207ENST00000488320 TDRD5Q8NAT2 981 aaKnown RBP10.7□□□□□ -0.7
COL17A1-207ENST00000488320 DTWD2Q8NBA8 298 aa10.7□□□□□ -0.7
COL17A1-207ENST00000488320 COLGALT1Q8NBJ5 622 aa10.7□□□□□ -0.7
COL17A1-207ENST00000488320 GIMAP8Q8ND71 665 aaPredicted RBP10.7□□□□□ -0.7
COL17A1-207ENST00000488320 RASGRP4Q8TDF6 673 aa10.7□□□□□ -0.7
COL17A1-207ENST00000488320 OTUD7AQ8TE49 926 aaPredicted RBP10.7□□□□□ -0.7
COL17A1-207ENST00000488320 MRPS27Q92552 414 aaKnown RBP10.7□□□□□ -0.7
COL17A1-207ENST00000488320 EVI5LQ96CN4 794 aa10.7□□□□□ -0.7
COL17A1-207ENST00000488320 ZSCAN10Q96SZ4 725 aaPredicted RBP10.7□□□□□ -0.7
COL17A1-207ENST00000488320 RTP3Q9BQQ7 232 aa10.7□□□□□ -0.7
COL17A1-207ENST00000488320 ADAM7Q9H2U9 754 aa10.7□□□□□ -0.7
COL17A1-207ENST00000488320 SEMA4AQ9H3S1 761 aa10.7□□□□□ -0.7
COL17A1-207ENST00000488320 TYW1Q9NV66 732 aaKnown RBP10.7□□□□□ -0.7
COL17A1-207ENST00000488320 ERAP1Q9NZ08 941 aa10.7□□□□□ -0.7
COL17A1-207ENST00000488320 ZBTB47Q9UFB7 747 aaPredicted RBP10.7□□□□□ -0.7
COL17A1-207ENST00000488320 DBR1Q9UK59 544 aaKnown RBP10.7□□□□□ -0.7
COL17A1-207ENST00000488320 FBXL21Q9UKT6 434 aa10.7□□□□□ -0.7
COL17A1-207ENST00000488320 CACNA1BQ00975 2339 aa10.69□□□□□ -0.7
COL17A1-207ENST00000488320 NEDD4P46934 1319 aa10.69□□□□□ -0.7
COL17A1-207ENST00000488320 DENND3A2RUS2 1198 aa10.69□□□□□ -0.7
COL17A1-207ENST00000488320 RRN3P2A6NIE6 340 aa10.69□□□□□ -0.7
COL17A1-207ENST00000488320 HIDE1A8MVS5 230 aa10.69□□□□□ -0.7
COL17A1-207ENST00000488320 KLRF2D3W0D1 207 aa10.69□□□□□ -0.7
COL17A1-207ENST00000488320 AOC1P19801 751 aa10.69□□□□□ -0.7
COL17A1-207ENST00000488320 MX1P20591 662 aa10.69□□□□□ -0.7
COL17A1-207ENST00000488320 RFX1P22670 979 aa10.69□□□□□ -0.7
COL17A1-207ENST00000488320 KRT17Q04695 432 aa10.69□□□□□ -0.7
COL17A1-207ENST00000488320 SEMA3FQ13275 785 aa10.69□□□□□ -0.7
COL17A1-207ENST00000488320 ATAT1Q5SQI0 421 aa10.69□□□□□ -0.7
COL17A1-207ENST00000488320 TBC1D10CQ8IV04 446 aa10.69□□□□□ -0.7
COL17A1-207ENST00000488320 CCDC105Q8IYK2 499 aa10.69□□□□□ -0.7
COL17A1-207ENST00000488320 TMEM87AQ8NBN3 555 aa10.69□□□□□ -0.7
COL17A1-207ENST00000488320 SEPT1Q8WYJ6 367 aa10.69□□□□□ -0.7
COL17A1-207ENST00000488320 ZBTB10Q96DT7 871 aa10.69□□□□□ -0.7
COL17A1-207ENST00000488320 FAM227BQ96M60 508 aa10.69□□□□□ -0.7
COL17A1-207ENST00000488320 INPP4AQ96PE3 977 aaPredicted RBP10.69□□□□□ -0.7
COL17A1-207ENST00000488320 SENP7Q9BQF6 1050 aa10.69□□□□□ -0.7
COL17A1-207ENST00000488320 SMARCAD1Q9H4L7 1026 aa10.69□□□□□ -0.7
COL17A1-207ENST00000488320 LZTS1Q9Y250 596 aa10.69□□□□□ -0.7
COL17A1-207ENST00000488320 FNDC1Q4ZHG4 1894 aaPredicted RBP10.69□□□□□ -0.7
COL17A1-207ENST00000488320 ZMYM6O95789 1325 aa10.68□□□□□ -0.7
COL17A1-207ENST00000488320 MBLAC1A4D2B0 266 aaPredicted RBP10.68□□□□□ -0.7
COL17A1-207ENST00000488320 PPP1R11O60927 126 aaPredicted RBP10.68□□□□□ -0.7
COL17A1-207ENST00000488320 ABCB7O75027 752 aa10.68□□□□□ -0.7
COL17A1-207ENST00000488320 WEE2P0C1S8 567 aa10.68□□□□□ -0.7
COL17A1-207ENST00000488320 LAG3P18627 525 aa10.68□□□□□ -0.7
COL17A1-207ENST00000488320 PLCB3Q01970 1234 aa10.68□□□□□ -0.7
COL17A1-207ENST00000488320 TMEM266Q2M3C6 531 aa10.68□□□□□ -0.7
COL17A1-207ENST00000488320 MARCH8Q5T0T0 291 aa10.68□□□□□ -0.7
COL17A1-207ENST00000488320 RARS2Q5T160 578 aaKnown RBP10.68□□□□□ -0.7
COL17A1-207ENST00000488320 CWF19L1Q69YN2 538 aaKnown RBP10.68□□□□□ -0.7
COL17A1-207ENST00000488320 ZDHHC14Q8IZN3 488 aa10.68□□□□□ -0.7
COL17A1-207ENST00000488320 ENAHQ8N8S7 591 aaPredicted RBP10.68□□□□□ -0.7
COL17A1-207ENST00000488320 CYP2W1Q8TAV3 490 aa10.68□□□□□ -0.7
COL17A1-207ENST00000488320 TNPO1Q92973 898 aaKnown RBP10.68□□□□□ -0.7
COL17A1-207ENST00000488320 ACSF2Q96CM8 615 aaPredicted RBP10.68□□□□□ -0.7
COL17A1-207ENST00000488320 CELF4Q9BZC1 486 aaKnown RBP10.68□□□□□ -0.7
COL17A1-207ENST00000488320 ATP6V0A4Q9HBG4 840 aa10.68□□□□□ -0.7
COL17A1-207ENST00000488320 GINS2Q9Y248 185 aa10.68□□□□□ -0.7
COL17A1-207ENST00000488320 R4GN57 208 aa10.68□□□□□ -0.7
COL17A1-207ENST00000488320 IGSF9BQ9UPX0 1349 aa10.67□□□□□ -0.7
COL17A1-207ENST00000488320 A0A0D9SFI3 127 aa10.67□□□□□ -0.7
COL17A1-207ENST00000488320 GSTTP1A0A1W2PQM5 241 aa10.67□□□□□ -0.7
COL17A1-207ENST00000488320 B4E1Z4 1266 aa10.67□□□□□ -0.7
COL17A1-207ENST00000488320 RPS6KA5O75582 802 aa10.67□□□□□ -0.7
COL17A1-207ENST00000488320 INSRRP14616 1297 aa10.67□□□□□ -0.7
COL17A1-207ENST00000488320 NT5C2P49902 561 aa10.67□□□□□ -0.7
COL17A1-207ENST00000488320 KRT76Q01546 638 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms