RNA–Protein interactions for RNA: ENST00000488255.1

VPS8-224, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 2

Gene VPS8, Length 564 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-224ENST00000488255 KLHL18O94889 574 aa6.94□□□□□ -1.3
VPS8-224ENST00000488255 ADCY8P40145 1251 aa6.94□□□□□ -1.3
VPS8-224ENST00000488255 RANGAP1P46060 587 aaPredicted RBP6.94□□□□□ -1.3
VPS8-224ENST00000488255 PLP2Q04941 152 aa6.94□□□□□ -1.3
VPS8-224ENST00000488255 NFATC3Q12968 1075 aa6.94□□□□□ -1.3
VPS8-224ENST00000488255 WDR72Q3MJ13 1102 aa6.94□□□□□ -1.3
VPS8-224ENST00000488255 LRSAM1Q6UWE0 723 aa6.94□□□□□ -1.3
VPS8-224ENST00000488255 LGI4Q8N135 537 aa6.94□□□□□ -1.3
VPS8-224ENST00000488255 CHST14Q8NCH0 376 aa6.94□□□□□ -1.3
VPS8-224ENST00000488255 ASB15Q8WXK1 588 aa6.94□□□□□ -1.3
VPS8-224ENST00000488255 BTBD7Q9P203 1132 aa6.94□□□□□ -1.3
VPS8-224ENST00000488255 B3GALT1Q9Y5Z6 326 aa6.94□□□□□ -1.3
VPS8-224ENST00000488255 C9orf118A6NHY6 69 aa6.93□□□□□ -1.3
VPS8-224ENST00000488255 RASSF10A6NK89 507 aa6.93□□□□□ -1.3
VPS8-224ENST00000488255 B4GALT3O60512 393 aa6.93□□□□□ -1.3
VPS8-224ENST00000488255 KPNA6O60684 536 aa6.93□□□□□ -1.3
VPS8-224ENST00000488255 RFPL3O75679 317 aa6.93□□□□□ -1.3
VPS8-224ENST00000488255 SYN1P17600 705 aa6.93□□□□□ -1.3
VPS8-224ENST00000488255 HERVK_113P62684 666 aa6.93□□□□□ -1.3
VPS8-224ENST00000488255 DPP8Q6V1X1 898 aaPredicted RBP6.93□□□□□ -1.3
VPS8-224ENST00000488255 KBTBD2Q8IY47 623 aa6.93□□□□□ -1.3
VPS8-224ENST00000488255 SYNPOQ8N3V7 929 aa6.93□□□□□ -1.3
VPS8-224ENST00000488255 GALNT8Q9NY28 637 aa6.93□□□□□ -1.3
VPS8-224ENST00000488255 MAGEC2Q9UBF1 373 aaPredicted RBP6.93□□□□□ -1.3
VPS8-224ENST00000488255 KRTAP9-7A8MTY7 169 aa6.92□□□□□ -1.3
VPS8-224ENST00000488255 B8ZZF3 427 aa6.92□□□□□ -1.3
VPS8-224ENST00000488255 TRAF5O00463 557 aa6.92□□□□□ -1.3
VPS8-224ENST00000488255 ZBTB48P10074 688 aaPredicted RBP6.92□□□□□ -1.3
VPS8-224ENST00000488255 KIF11P52732 1056 aa6.92□□□□□ -1.3
VPS8-224ENST00000488255 IL13RA1P78552 427 aa6.92□□□□□ -1.3
VPS8-224ENST00000488255 ARHGAP44Q17R89 818 aa6.92□□□□□ -1.3
VPS8-224ENST00000488255 ZFYVE27Q5T4F4 411 aa6.92□□□□□ -1.3
VPS8-224ENST00000488255 ERICH6BQ5W0A0 696 aa6.92□□□□□ -1.3
VPS8-224ENST00000488255 Q6ZUG5 572 aa6.92□□□□□ -1.3
VPS8-224ENST00000488255 KLHL36Q8N4N3 616 aa6.92□□□□□ -1.3
VPS8-224ENST00000488255 CXorf38Q8TB03 319 aa6.92□□□□□ -1.3
VPS8-224ENST00000488255 DLG3Q92796 817 aa6.92□□□□□ -1.3
VPS8-224ENST00000488255 MBD6Q96DN6 1003 aa6.92□□□□□ -1.3
VPS8-224ENST00000488255 AMNQ9BXJ7 453 aa6.92□□□□□ -1.3
VPS8-224ENST00000488255 PCIF1Q9H4Z3 704 aa6.92□□□□□ -1.3
VPS8-224ENST00000488255 JADE2Q9NQC1 790 aa6.92□□□□□ -1.3
VPS8-224ENST00000488255 CHGBP05060 677 aa6.91□□□□□ -1.3
VPS8-224ENST00000488255 CELA3BP08861 270 aa6.91□□□□□ -1.3
VPS8-224ENST00000488255 MECP2P51608 486 aaKnown RBP6.91□□□□□ -1.3
VPS8-224ENST00000488255 CATSPEREQ5SY80 951 aa6.91□□□□□ -1.3
VPS8-224ENST00000488255 NIM1KQ8IY84 436 aa6.91□□□□□ -1.3
VPS8-224ENST00000488255 NINJ1Q92982 152 aa6.91□□□□□ -1.3
VPS8-224ENST00000488255 CDC42EP3Q9UKI2 254 aa6.91□□□□□ -1.3
VPS8-224ENST00000488255 PTPN22Q9Y2R2 807 aa6.91□□□□□ -1.3
VPS8-224ENST00000488255 H7C1D1 291 aa6.9□□□□□ -1.3
VPS8-224ENST00000488255 CBX4O00257 560 aa6.9□□□□□ -1.3
VPS8-224ENST00000488255 DVL2O14641 736 aa6.9□□□□□ -1.3
VPS8-224ENST00000488255 MPIG6BO95866 241 aa6.9□□□□□ -1.3
VPS8-224ENST00000488255 ECE1P42892 770 aa6.9□□□□□ -1.3
VPS8-224ENST00000488255 RRADP55042 308 aa6.9□□□□□ -1.3
VPS8-224ENST00000488255 SKOR2Q2VWA4 1001 aaPredicted RBP6.9□□□□□ -1.3
VPS8-224ENST00000488255 TBC1D10BQ4KMP7 808 aaPredicted RBP6.9□□□□□ -1.3
VPS8-224ENST00000488255 OTOP1Q7RTM1 612 aa6.9□□□□□ -1.3
VPS8-224ENST00000488255 OTOP2Q7RTS6 562 aa6.9□□□□□ -1.3
VPS8-224ENST00000488255 RALYLQ86SE5 291 aaKnown RBP6.9□□□□□ -1.3
VPS8-224ENST00000488255 NOP9Q86U38 636 aaKnown RBP6.9□□□□□ -1.3
VPS8-224ENST00000488255 LRRTM3Q86VH5 581 aa6.9□□□□□ -1.3
VPS8-224ENST00000488255 NXPE1Q8N323 547 aa6.9□□□□□ -1.3
VPS8-224ENST00000488255 ZKSCAN5Q9Y2L8 839 aa6.9□□□□□ -1.3
VPS8-224ENST00000488255 ZNF888P0CJ79 500 aaPredicted RBP6.89□□□□□ -1.31
VPS8-224ENST00000488255 SLC9A1P19634 815 aa6.89□□□□□ -1.31
VPS8-224ENST00000488255 KCNQ1P51787 676 aa6.89□□□□□ -1.31
VPS8-224ENST00000488255 CD83Q01151 205 aa6.89□□□□□ -1.31
VPS8-224ENST00000488255 ZNF174Q15697 407 aa6.89□□□□□ -1.31
VPS8-224ENST00000488255 CC2D1AQ6P1N0 951 aaPredicted RBP6.89□□□□□ -1.31
VPS8-224ENST00000488255 ARHGEF18Q6ZSZ5 1173 aa6.89□□□□□ -1.31
VPS8-224ENST00000488255 LIMS2Q7Z4I7 341 aa6.89□□□□□ -1.31
VPS8-224ENST00000488255 KIAA1958Q8N8K9 716 aa6.89□□□□□ -1.31
VPS8-224ENST00000488255 FEZ1Q99689 392 aa6.89□□□□□ -1.31
VPS8-224ENST00000488255 INTS7Q9NVH2 962 aaKnown RBP6.89□□□□□ -1.31
VPS8-224ENST00000488255 B4GALT6Q9UBX8 382 aa6.89□□□□□ -1.31
VPS8-224ENST00000488255 ADAM29Q9UKF5 820 aa6.89□□□□□ -1.31
VPS8-224ENST00000488255 GOLGA6L22H0YM25 854 aa6.88□□□□□ -1.31
VPS8-224ENST00000488255 PRRG2O14669 202 aa6.88□□□□□ -1.31
VPS8-224ENST00000488255 LAMTOR5O43504 91 aa6.88□□□□□ -1.31
VPS8-224ENST00000488255 POLD1P28340 1107 aa6.88□□□□□ -1.31
VPS8-224ENST00000488255 SDHAP31040 664 aa6.88□□□□□ -1.31
VPS8-224ENST00000488255 CSF2RBP32927 897 aa6.88□□□□□ -1.31
VPS8-224ENST00000488255 PCBP1Q15365 356 aaKnown RBP eCLIP6.88□□□□□ -1.31
VPS8-224ENST00000488255 DALRD3Q5D0E6 543 aaKnown RBP6.88□□□□□ -1.31
VPS8-224ENST00000488255 LCE1DQ5T752 114 aa6.88□□□□□ -1.31
VPS8-224ENST00000488255 GIMAP6Q6P9H5 292 aa6.88□□□□□ -1.31
VPS8-224ENST00000488255 PLEKHH3Q7Z736 793 aa6.88□□□□□ -1.31
VPS8-224ENST00000488255 PTPN18Q99952 460 aa6.88□□□□□ -1.31
VPS8-224ENST00000488255 BTBD2Q9BX70 525 aa6.88□□□□□ -1.31
VPS8-224ENST00000488255 IFT57Q9NWB7 429 aa6.88□□□□□ -1.31
VPS8-224ENST00000488255 H2AFY2Q9P0M6 372 aaPredicted RBP6.88□□□□□ -1.31
VPS8-224ENST00000488255 ASB1Q9Y576 335 aa6.88□□□□□ -1.31
VPS8-224ENST00000488255 ZNF891A8MT65 544 aaPredicted RBP6.87□□□□□ -1.31
VPS8-224ENST00000488255 K7ESM1 405 aa6.87□□□□□ -1.31
VPS8-224ENST00000488255 PLATP00750 562 aa6.87□□□□□ -1.31
VPS8-224ENST00000488255 PTX3P26022 381 aaPredicted RBP6.87□□□□□ -1.31
VPS8-224ENST00000488255 BUD31P41223 144 aaPredicted RBP6.87□□□□□ -1.31
VPS8-224ENST00000488255 USP10Q14694 798 aaKnown RBP6.87□□□□□ -1.31
VPS8-224ENST00000488255 NOLC1Q14978 699 aaKnown RBP eCLIP6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms