RNA–Protein interactions for RNA: ENST00000488155.1

NIPAL3-207, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best)

Gene NIPAL3, Length 931 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-207ENST00000488155 POU3F3P20264 500 aaPredicted RBP12.84□□□□□ -0.35
NIPAL3-207ENST00000488155 CD52P31358 61 aa12.84□□□□□ -0.35
NIPAL3-207ENST00000488155 KCNQ1P51787 676 aa12.84□□□□□ -0.35
NIPAL3-207ENST00000488155 NLRP5P59047 1200 aa12.84□□□□□ -0.35
NIPAL3-207ENST00000488155 MRPS6P82932 125 aaKnown RBP12.84□□□□□ -0.35
NIPAL3-207ENST00000488155 HTRA4P83105 476 aaPredicted RBP12.84□□□□□ -0.35
NIPAL3-207ENST00000488155 SSRP1Q08945 709 aaKnown RBP12.84□□□□□ -0.35
NIPAL3-207ENST00000488155 FBXO47Q5MNV8 452 aa12.84□□□□□ -0.35
NIPAL3-207ENST00000488155 SWSAP1Q6NVH7 229 aa12.84□□□□□ -0.35
NIPAL3-207ENST00000488155 ABHD15Q6UXT9 468 aa12.84□□□□□ -0.35
NIPAL3-207ENST00000488155 NIPA1Q7RTP0 329 aa12.84□□□□□ -0.35
NIPAL3-207ENST00000488155 PLPPR4Q7Z2D5 763 aa12.84□□□□□ -0.35
NIPAL3-207ENST00000488155 CCDC60Q8IWA6 550 aaPredicted RBP12.84□□□□□ -0.35
NIPAL3-207ENST00000488155 FBXL16Q8N461 479 aa12.84□□□□□ -0.35
NIPAL3-207ENST00000488155 IL27Q8NEV9 243 aa12.84□□□□□ -0.35
NIPAL3-207ENST00000488155 FBXO22Q8NEZ5 403 aa12.84□□□□□ -0.35
NIPAL3-207ENST00000488155 CCDC148Q8NFR7 591 aa12.84□□□□□ -0.35
NIPAL3-207ENST00000488155 CRYGNQ8WXF5 182 aa12.84□□□□□ -0.35
NIPAL3-207ENST00000488155 APBB2Q92870 758 aa12.84□□□□□ -0.35
NIPAL3-207ENST00000488155 AGO3Q9H9G7 860 aaKnown RBP12.84□□□□□ -0.35
NIPAL3-207ENST00000488155 ZNF302Q9NR11 478 aa12.84□□□□□ -0.35
NIPAL3-207ENST00000488155 GINS2Q9Y248 185 aa12.84□□□□□ -0.35
NIPAL3-207ENST00000488155 M0QZ92 97 aa12.83□□□□□ -0.36
NIPAL3-207ENST00000488155 CPLX1O14810 134 aa12.83□□□□□ -0.36
NIPAL3-207ENST00000488155 KLRC1P26715 233 aa12.83□□□□□ -0.36
NIPAL3-207ENST00000488155 FAM160B1Q5W0V3 765 aa12.83□□□□□ -0.36
NIPAL3-207ENST00000488155 PDXDC2PQ6P474 469 aa12.83□□□□□ -0.36
NIPAL3-207ENST00000488155 MTHFD1LQ6UB35 978 aa12.83□□□□□ -0.36
NIPAL3-207ENST00000488155 RPAINQ86UA6 219 aa12.83□□□□□ -0.36
NIPAL3-207ENST00000488155 TEX2Q8IWB9 1127 aa12.83□□□□□ -0.36
NIPAL3-207ENST00000488155 CKAP2LQ8IYA6 745 aa12.83□□□□□ -0.36
NIPAL3-207ENST00000488155 TRIM22Q8IYM9 498 aa12.83□□□□□ -0.36
NIPAL3-207ENST00000488155 ADAMTS19Q8TE59 1207 aa12.83□□□□□ -0.36
NIPAL3-207ENST00000488155 GJA10Q969M2 543 aa12.83□□□□□ -0.36
NIPAL3-207ENST00000488155 AIFM3Q96NN9 605 aa12.83□□□□□ -0.36
NIPAL3-207ENST00000488155 NECAB3Q96P71 396 aaPredicted RBP12.83□□□□□ -0.36
NIPAL3-207ENST00000488155 PPP1R16BQ96T49 567 aa12.83□□□□□ -0.36
NIPAL3-207ENST00000488155 PDRG1Q9NUG6 133 aa12.83□□□□□ -0.36
NIPAL3-207ENST00000488155 TCEAL9Q9UHQ7 104 aa12.83□□□□□ -0.36
NIPAL3-207ENST00000488155 PCDHA2Q9Y5H9 948 aa12.83□□□□□ -0.36
NIPAL3-207ENST00000488155 TRPV2Q9Y5S1 764 aa12.83□□□□□ -0.36
NIPAL3-207ENST00000488155 IGKV6D-21A0A0A0MT36 114 aa12.82□□□□□ -0.36
NIPAL3-207ENST00000488155 ENPP3O14638 875 aa12.82□□□□□ -0.36
NIPAL3-207ENST00000488155 HBP1O60381 514 aa12.82□□□□□ -0.36
NIPAL3-207ENST00000488155 ATP4AP20648 1035 aa12.82□□□□□ -0.36
NIPAL3-207ENST00000488155 EVCP57679 992 aa12.82□□□□□ -0.36
NIPAL3-207ENST00000488155 TMEM266Q2M3C6 531 aa12.82□□□□□ -0.36
NIPAL3-207ENST00000488155 IER5Q5VY09 327 aa12.82□□□□□ -0.36
NIPAL3-207ENST00000488155 MIS18BP1Q6P0N0 1132 aa12.82□□□□□ -0.36
NIPAL3-207ENST00000488155 TSHZ1Q6ZSZ6 1077 aa12.82□□□□□ -0.36
NIPAL3-207ENST00000488155 BICD2Q8TD16 824 aa12.82□□□□□ -0.36
NIPAL3-207ENST00000488155 SP7Q8TDD2 431 aaPredicted RBP12.82□□□□□ -0.36
NIPAL3-207ENST00000488155 ATP8B4Q8TF62 1192 aa12.82□□□□□ -0.36
NIPAL3-207ENST00000488155 TNPO1Q92973 898 aaKnown RBP12.82□□□□□ -0.36
NIPAL3-207ENST00000488155 PPP4R2Q9NY27 417 aa12.82□□□□□ -0.36
NIPAL3-207ENST00000488155 SAMM50Q9Y512 469 aa12.82□□□□□ -0.36
NIPAL3-207ENST00000488155 PLXNA4Q9HCM2 1894 aa12.82□□□□□ -0.36
NIPAL3-207ENST00000488155 CHMP2AO43633 222 aa12.81□□□□□ -0.36
NIPAL3-207ENST00000488155 EDIL3O43854 480 aa12.81□□□□□ -0.36
NIPAL3-207ENST00000488155 CSPG5O95196 566 aa12.81□□□□□ -0.36
NIPAL3-207ENST00000488155 SETQ01105 290 aaPredicted RBP12.81□□□□□ -0.36
NIPAL3-207ENST00000488155 NFX1Q12986 1120 aaKnown RBP12.81□□□□□ -0.36
NIPAL3-207ENST00000488155 GPM6BQ13491 265 aa12.81□□□□□ -0.36
NIPAL3-207ENST00000488155 EPC2Q52LR7 807 aa12.81□□□□□ -0.36
NIPAL3-207ENST00000488155 MCTP2Q6DN12 878 aa12.81□□□□□ -0.36
NIPAL3-207ENST00000488155 TMEM192Q8IY95 271 aa12.81□□□□□ -0.36
NIPAL3-207ENST00000488155 FIBCD1Q8N539 461 aa12.81□□□□□ -0.36
NIPAL3-207ENST00000488155 TBCKQ8TEA7 893 aa12.81□□□□□ -0.36
NIPAL3-207ENST00000488155 LINC01599Q8WXQ3 324 aa12.81□□□□□ -0.36
NIPAL3-207ENST00000488155 IL17RAQ96F46 866 aa12.81□□□□□ -0.36
NIPAL3-207ENST00000488155 ZNF274Q96GC6 653 aaPredicted RBP12.81□□□□□ -0.36
NIPAL3-207ENST00000488155 CELF4Q9BZC1 486 aaKnown RBP12.81□□□□□ -0.36
NIPAL3-207ENST00000488155 TM6SF1Q9BZW5 370 aa12.81□□□□□ -0.36
NIPAL3-207ENST00000488155 CDHR5Q9HBB8 845 aa12.81□□□□□ -0.36
NIPAL3-207ENST00000488155 TBC1D22BQ9NU19 505 aa12.81□□□□□ -0.36
NIPAL3-207ENST00000488155 GABBR1Q9UBS5 961 aa12.81□□□□□ -0.36
NIPAL3-207ENST00000488155 PADI3Q9ULW8 664 aa12.81□□□□□ -0.36
NIPAL3-207ENST00000488155 SMIM35A0A1B0GVV1 85 aa12.8□□□□□ -0.36
NIPAL3-207ENST00000488155 TNFRSF10AO00220 468 aa12.8□□□□□ -0.36
NIPAL3-207ENST00000488155 MSH4O15457 936 aa12.8□□□□□ -0.36
NIPAL3-207ENST00000488155 EPB41L2O43491 1005 aaKnown RBP12.8□□□□□ -0.36
NIPAL3-207ENST00000488155 DEXIO95424 95 aa12.8□□□□□ -0.36
NIPAL3-207ENST00000488155 PSAPP07602 524 aa12.8□□□□□ -0.36
NIPAL3-207ENST00000488155 CIITAP33076 1130 aa12.8□□□□□ -0.36
NIPAL3-207ENST00000488155 SLC26A2P50443 739 aa12.8□□□□□ -0.36
NIPAL3-207ENST00000488155 KRT76Q01546 638 aa12.8□□□□□ -0.36
NIPAL3-207ENST00000488155 PAK2Q13177 524 aa12.8□□□□□ -0.36
NIPAL3-207ENST00000488155 ZNF746Q6NUN9 644 aaPredicted RBP12.8□□□□□ -0.36
NIPAL3-207ENST00000488155 RTN4RL1Q86UN2 441 aaPredicted RBP12.8□□□□□ -0.36
NIPAL3-207ENST00000488155 METTL13Q8N6R0 699 aa12.8□□□□□ -0.36
NIPAL3-207ENST00000488155 HLA-CQ95604 372 aa12.8□□□□□ -0.36
NIPAL3-207ENST00000488155 LENG9Q96B70 501 aa12.8□□□□□ -0.36
NIPAL3-207ENST00000488155 UHRF1Q96T88 793 aaPredicted RBP12.8□□□□□ -0.36
NIPAL3-207ENST00000488155 LMCD1Q9NZU5 365 aa12.8□□□□□ -0.36
NIPAL3-207ENST00000488155 KCNJ14Q9UNX9 436 aa12.8□□□□□ -0.36
NIPAL3-207ENST00000488155 PCDHA10Q9Y5I2 948 aa12.8□□□□□ -0.36
NIPAL3-207ENST00000488155 XIRP2A4UGR9 3374 aa12.8□□□□□ -0.36
NIPAL3-207ENST00000488155 ZBTB42B2RXF5 422 aa12.79□□□□□ -0.36
NIPAL3-207ENST00000488155 TDP2O95551 362 aa12.79□□□□□ -0.36
NIPAL3-207ENST00000488155 BMP1P13497 986 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms