RNA–Protein interactions for RNA: ENST00000488127.1

LDLRAP1-207, Transcript of low density lipoprotein receptor adaptor protein 1, humanhuman

TSL 2

Gene LDLRAP1, Length 4,670 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAP1-207ENST00000488127 ZDHHC9Q9Y397 364 aa12.68□□□□□ -0.38
LDLRAP1-207ENST00000488127 CCL15-CCL14A0A0B4J2E2 113 aa12.68□□□□□ -0.38
LDLRAP1-207ENST00000488127 K7ERI5 159 aa12.68□□□□□ -0.38
LDLRAP1-207ENST00000488127 FERP16591 822 aa12.68□□□□□ -0.38
LDLRAP1-207ENST00000488127 FKBP3Q00688 224 aaKnown RBP12.68□□□□□ -0.38
LDLRAP1-207ENST00000488127 CCL15Q16663 113 aa12.68□□□□□ -0.38
LDLRAP1-207ENST00000488127 RSPH3Q86UC2 560 aa12.68□□□□□ -0.38
LDLRAP1-207ENST00000488127 FAM186BQ8IYM0 893 aa12.68□□□□□ -0.38
LDLRAP1-207ENST00000488127 VPS52Q8N1B4 723 aa12.68□□□□□ -0.38
LDLRAP1-207ENST00000488127 ANKRD13CQ8N6S4 541 aa12.68□□□□□ -0.38
LDLRAP1-207ENST00000488127 AGBL1Q96MI9 1066 aa12.68□□□□□ -0.38
LDLRAP1-207ENST00000488127 GBP5Q96PP8 586 aa12.68□□□□□ -0.38
LDLRAP1-207ENST00000488127 RPS6KC1Q96S38 1066 aa12.68□□□□□ -0.38
LDLRAP1-207ENST00000488127 GABBR1Q9UBS5 961 aa12.68□□□□□ -0.38
LDLRAP1-207ENST00000488127 EPN1Q9Y6I3 576 aaPredicted RBP12.68□□□□□ -0.38
LDLRAP1-207ENST00000488127 WDR64B1ANS9 1081 aa12.68□□□□□ -0.38
LDLRAP1-207ENST00000488127 RGS16O15492 202 aaPredicted RBP12.68□□□□□ -0.38
LDLRAP1-207ENST00000488127 ABL1P00519 1130 aa12.68□□□□□ -0.38
LDLRAP1-207ENST00000488127 EPHX2P34913 555 aa12.68□□□□□ -0.38
LDLRAP1-207ENST00000488127 COPB1P53618 953 aaKnown RBP12.68□□□□□ -0.38
LDLRAP1-207ENST00000488127 CASP8Q14790 479 aa12.68□□□□□ -0.38
LDLRAP1-207ENST00000488127 LIN9Q5TKA1 542 aa12.68□□□□□ -0.38
LDLRAP1-207ENST00000488127 FYB2Q5VWT5 728 aa12.68□□□□□ -0.38
LDLRAP1-207ENST00000488127 LPAR1Q92633 364 aa12.68□□□□□ -0.38
LDLRAP1-207ENST00000488127 METTL14Q9HCE5 456 aaKnown RBP12.68□□□□□ -0.38
LDLRAP1-207ENST00000488127 FZD1Q9UP38 647 aa12.68□□□□□ -0.38
LDLRAP1-207ENST00000488127 HYOU1Q9Y4L1 999 aa12.68□□□□□ -0.38
LDLRAP1-207ENST00000488127 MORC2Q9Y6X9 1032 aaPredicted RBP12.68□□□□□ -0.38
LDLRAP1-207ENST00000488127 NWD1Q149M9 1564 aa12.68□□□□□ -0.38
LDLRAP1-207ENST00000488127 EXOC3L4Q17RC7 722 aa12.68□□□□□ -0.38
LDLRAP1-207ENST00000488127 ANKRD13AQ8IZ07 590 aa12.68□□□□□ -0.38
LDLRAP1-207ENST00000488127 ANKRD42Q8N9B4 389 aa12.68□□□□□ -0.38
LDLRAP1-207ENST00000488127 N4BP2L2Q92802 583 aaPredicted RBP12.68□□□□□ -0.38
LDLRAP1-207ENST00000488127 VCX3BQ9H321 246 aa12.68□□□□□ -0.38
LDLRAP1-207ENST00000488127 COMMD10Q9Y6G5 202 aa12.68□□□□□ -0.38
LDLRAP1-207ENST00000488127 KIF1AQ12756 1690 aa12.67□□□□□ -0.38
LDLRAP1-207ENST00000488127 EIF3CLB5ME19 914 aaKnown RBP12.67□□□□□ -0.38
LDLRAP1-207ENST00000488127 IL1R1P14778 569 aa12.67□□□□□ -0.38
LDLRAP1-207ENST00000488127 ZSCAN20P17040 1043 aaPredicted RBP12.67□□□□□ -0.38
LDLRAP1-207ENST00000488127 HOXA10P31260 410 aaPredicted RBP12.67□□□□□ -0.38
LDLRAP1-207ENST00000488127 MUM1Q2TAK8 710 aa12.67□□□□□ -0.38
LDLRAP1-207ENST00000488127 ABI1Q8IZP0 508 aa12.67□□□□□ -0.38
LDLRAP1-207ENST00000488127 TCP11Q8WWU5 503 aa12.67□□□□□ -0.38
LDLRAP1-207ENST00000488127 EIF3CQ99613 913 aaKnown RBP12.67□□□□□ -0.38
LDLRAP1-207ENST00000488127 AGTPBP1Q9UPW5 1226 aa12.67□□□□□ -0.38
LDLRAP1-207ENST00000488127 GAP43P17677 238 aa12.67□□□□□ -0.38
LDLRAP1-207ENST00000488127 TCP1P17987 556 aaKnown RBP12.67□□□□□ -0.38
LDLRAP1-207ENST00000488127 SNAPC2Q13487 334 aa12.67□□□□□ -0.38
LDLRAP1-207ENST00000488127 GRIK5Q16478 980 aa12.67□□□□□ -0.38
LDLRAP1-207ENST00000488127 ZNF658Q5TYW1 1059 aaPredicted RBP12.67□□□□□ -0.38
LDLRAP1-207ENST00000488127 THNSL1Q8IYQ7 743 aa12.67□□□□□ -0.38
LDLRAP1-207ENST00000488127 TSNARE1Q96NA8 513 aa12.67□□□□□ -0.38
LDLRAP1-207ENST00000488127 ACCSQ96QU6 501 aa12.67□□□□□ -0.38
LDLRAP1-207ENST00000488127 RGL1Q9NZL6 768 aa12.67□□□□□ -0.38
LDLRAP1-207ENST00000488127 TXNDC9O14530 226 aa12.67□□□□□ -0.38
LDLRAP1-207ENST00000488127 PRELPP51888 382 aa12.67□□□□□ -0.38
LDLRAP1-207ENST00000488127 UAP1Q16222 522 aaPredicted RBP12.67□□□□□ -0.38
LDLRAP1-207ENST00000488127 CEP55Q53EZ4 464 aa12.67□□□□□ -0.38
LDLRAP1-207ENST00000488127 DENND2CQ68D51 928 aa12.67□□□□□ -0.38
LDLRAP1-207ENST00000488127 TADA2BQ86TJ2 420 aa12.67□□□□□ -0.38
LDLRAP1-207ENST00000488127 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.67□□□□□ -0.38
LDLRAP1-207ENST00000488127 C19orf81C9J6K1 198 aa12.67□□□□□ -0.38
LDLRAP1-207ENST00000488127 CTNND1O60716 968 aaKnown RBP12.67□□□□□ -0.38
LDLRAP1-207ENST00000488127 LRRN2O75325 713 aa12.67□□□□□ -0.38
LDLRAP1-207ENST00000488127 P4HA1P13674 534 aa12.67□□□□□ -0.38
LDLRAP1-207ENST00000488127 CYP2B6P20813 491 aa12.67□□□□□ -0.38
LDLRAP1-207ENST00000488127 SREK1Q8WXA9 508 aaKnown RBP12.67□□□□□ -0.38
LDLRAP1-207ENST00000488127 MAK16Q9BXY0 300 aaKnown RBP12.67□□□□□ -0.38
LDLRAP1-207ENST00000488127 JMJD4Q9H9V9 463 aa12.67□□□□□ -0.38
LDLRAP1-207ENST00000488127 TPX2Q9ULW0 747 aaKnown RBP12.67□□□□□ -0.38
LDLRAP1-207ENST00000488127 KIF3CO14782 793 aa12.66□□□□□ -0.38
LDLRAP1-207ENST00000488127 TROAPQ12815 778 aa12.66□□□□□ -0.38
LDLRAP1-207ENST00000488127 PADI6Q6TGC4 694 aa12.66□□□□□ -0.38
LDLRAP1-207ENST00000488127 PEX26Q7Z412 305 aa12.66□□□□□ -0.38
LDLRAP1-207ENST00000488127 CCDC110Q8TBZ0 833 aa12.66□□□□□ -0.38
LDLRAP1-207ENST00000488127 FAM20AQ96MK3 541 aa12.66□□□□□ -0.38
LDLRAP1-207ENST00000488127 ABCB6Q9NP58 842 aa12.66□□□□□ -0.38
LDLRAP1-207ENST00000488127 RIC8AQ9NPQ8 531 aa12.66□□□□□ -0.38
LDLRAP1-207ENST00000488127 ADARB2Q9NS39 739 aaKnown RBP12.66□□□□□ -0.38
LDLRAP1-207ENST00000488127 TBC1D22BQ9NU19 505 aa12.66□□□□□ -0.38
LDLRAP1-207ENST00000488127 NXF1Q9UBU9 619 aaKnown RBP12.66□□□□□ -0.38
LDLRAP1-207ENST00000488127 ASIC3Q9UHC3 531 aa12.66□□□□□ -0.38
LDLRAP1-207ENST00000488127 CASP14P31944 242 aa12.66□□□□□ -0.38
LDLRAP1-207ENST00000488127 CAP2P40123 477 aa12.66□□□□□ -0.38
LDLRAP1-207ENST00000488127 GOLPH3LQ9H4A5 285 aa12.66□□□□□ -0.38
LDLRAP1-207ENST00000488127 WNT10BO00744 389 aa12.66□□□□□ -0.38
LDLRAP1-207ENST00000488127 NOL3O60936 208 aaKnown RBP12.66□□□□□ -0.38
LDLRAP1-207ENST00000488127 PIK3CAP42336 1068 aa12.66□□□□□ -0.38
LDLRAP1-207ENST00000488127 TTLL4Q14679 1199 aa12.66□□□□□ -0.38
LDLRAP1-207ENST00000488127 RESP18Q5W5W9 173 aa12.66□□□□□ -0.38
LDLRAP1-207ENST00000488127 DHTKD1Q96HY7 919 aaPredicted RBP12.66□□□□□ -0.38
LDLRAP1-207ENST00000488127 ATP1A3P13637 1013 aa12.65□□□□□ -0.38
LDLRAP1-207ENST00000488127 ERCC5P28715 1186 aaPredicted RBP12.65□□□□□ -0.38
LDLRAP1-207ENST00000488127 TM4SF1P30408 202 aa12.65□□□□□ -0.38
LDLRAP1-207ENST00000488127 GUCY2DQ02846 1103 aa12.65□□□□□ -0.38
LDLRAP1-207ENST00000488127 PPP1R18Q6NYC8 613 aa12.65□□□□□ -0.38
LDLRAP1-207ENST00000488127 SPATA33Q96N06 139 aa12.65□□□□□ -0.38
LDLRAP1-207ENST00000488127 MED10Q9BTT4 135 aa12.65□□□□□ -0.38
LDLRAP1-207ENST00000488127 PLCB1Q9NQ66 1216 aa12.65□□□□□ -0.38
LDLRAP1-207ENST00000488127 STX2P32856 288 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms