RNA–Protein interactions for RNA: ENST00000487899.1

RAB11FIP3-210, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 3

Gene RAB11FIP3, Length 669 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-210ENST00000487899 C17orf80Q9BSJ5 609 aa12.76□□□□□ -0.37
RAB11FIP3-210ENST00000487899 FAM49AQ9H0Q0 323 aaPredicted RBP12.76□□□□□ -0.37
RAB11FIP3-210ENST00000487899 AZI2Q9H6S1 392 aa12.76□□□□□ -0.37
RAB11FIP3-210ENST00000487899 AGO3Q9H9G7 860 aaKnown RBP12.76□□□□□ -0.37
RAB11FIP3-210ENST00000487899 SUGCTQ9HAC7 445 aa12.76□□□□□ -0.37
RAB11FIP3-210ENST00000487899 C6orf50Q9HD87 102 aa12.76□□□□□ -0.37
RAB11FIP3-210ENST00000487899 TRPC6Q9Y210 931 aa12.76□□□□□ -0.37
RAB11FIP3-210ENST00000487899 INSL6Q9Y581 213 aa12.76□□□□□ -0.37
RAB11FIP3-210ENST00000487899 IGSF9BQ9UPX0 1349 aa12.76□□□□□ -0.37
RAB11FIP3-210ENST00000487899 MYO7AQ13402 2215 aa12.76□□□□□ -0.37
RAB11FIP3-210ENST00000487899 GTPBP6O43824 516 aaPredicted RBP12.75□□□□□ -0.37
RAB11FIP3-210ENST00000487899 TRIOO75962 3097 aa12.75□□□□□ -0.37
RAB11FIP3-210ENST00000487899 COL1A2P08123 1366 aa12.75□□□□□ -0.37
RAB11FIP3-210ENST00000487899 ATP4AP20648 1035 aa12.75□□□□□ -0.37
RAB11FIP3-210ENST00000487899 CIITAP33076 1130 aa12.75□□□□□ -0.37
RAB11FIP3-210ENST00000487899 SLC26A2P50443 739 aa12.75□□□□□ -0.37
RAB11FIP3-210ENST00000487899 STAT5BP51692 787 aa12.75□□□□□ -0.37
RAB11FIP3-210ENST00000487899 TSHZ1Q6ZSZ6 1077 aa12.75□□□□□ -0.37
RAB11FIP3-210ENST00000487899 ATP8B4Q8TF62 1192 aa12.75□□□□□ -0.37
RAB11FIP3-210ENST00000487899 AIFM3Q96NN9 605 aa12.75□□□□□ -0.37
RAB11FIP3-210ENST00000487899 LARP6Q9BRS8 491 aaKnown RBP12.75□□□□□ -0.37
RAB11FIP3-210ENST00000487899 PCDHA2Q9Y5H9 948 aa12.75□□□□□ -0.37
RAB11FIP3-210ENST00000487899 CYP46A1Q9Y6A2 500 aa12.75□□□□□ -0.37
RAB11FIP3-210ENST00000487899 ADGRA3Q8IWK6 1321 aa12.74□□□□□ -0.37
RAB11FIP3-210ENST00000487899 KDM3AQ9Y4C1 1321 aa12.74□□□□□ -0.37
RAB11FIP3-210ENST00000487899 POTEB3A0JP26 581 aa12.74□□□□□ -0.37
RAB11FIP3-210ENST00000487899 RRN3P2A6NIE6 340 aa12.74□□□□□ -0.37
RAB11FIP3-210ENST00000487899 M0R2N6 131 aa12.74□□□□□ -0.37
RAB11FIP3-210ENST00000487899 RPLP2P05387 115 aaKnown RBP12.74□□□□□ -0.37
RAB11FIP3-210ENST00000487899 GNA11P29992 359 aa12.74□□□□□ -0.37
RAB11FIP3-210ENST00000487899 ZNF76P36508 570 aa12.74□□□□□ -0.37
RAB11FIP3-210ENST00000487899 TMEM62Q0P6H9 643 aa12.74□□□□□ -0.37
RAB11FIP3-210ENST00000487899 PRR16Q569H4 304 aa12.74□□□□□ -0.37
RAB11FIP3-210ENST00000487899 MCTP2Q6DN12 878 aa12.74□□□□□ -0.37
RAB11FIP3-210ENST00000487899 POTEBQ6S5H4 581 aa12.74□□□□□ -0.37
RAB11FIP3-210ENST00000487899 RSPH3Q86UC2 560 aa12.74□□□□□ -0.37
RAB11FIP3-210ENST00000487899 SYMPKQ92797 1274 aaKnown RBP12.74□□□□□ -0.37
RAB11FIP3-210ENST00000487899 ZNF577Q9BSK1 485 aa12.74□□□□□ -0.37
RAB11FIP3-210ENST00000487899 BACH1O14867 736 aa12.73□□□□□ -0.37
RAB11FIP3-210ENST00000487899 UPP2O95045 317 aa12.73□□□□□ -0.37
RAB11FIP3-210ENST00000487899 C22orf31O95567 290 aa12.73□□□□□ -0.37
RAB11FIP3-210ENST00000487899 CD52P31358 61 aa12.73□□□□□ -0.37
RAB11FIP3-210ENST00000487899 KCNQ1P51787 676 aa12.73□□□□□ -0.37
RAB11FIP3-210ENST00000487899 MRPS5P82675 430 aaKnown RBP12.73□□□□□ -0.37
RAB11FIP3-210ENST00000487899 AKAP17AQ02040 695 aaKnown RBP12.73□□□□□ -0.37
RAB11FIP3-210ENST00000487899 ZNF746Q6NUN9 644 aaPredicted RBP12.73□□□□□ -0.37
RAB11FIP3-210ENST00000487899 MTHFD1LQ6UB35 978 aa12.73□□□□□ -0.37
RAB11FIP3-210ENST00000487899 CRIPAKQ8N1N5 446 aa12.73□□□□□ -0.37
RAB11FIP3-210ENST00000487899 FBXO22Q8NEZ5 403 aa12.73□□□□□ -0.37
RAB11FIP3-210ENST00000487899 BICD2Q8TD16 824 aa12.73□□□□□ -0.37
RAB11FIP3-210ENST00000487899 ADAMTS19Q8TE59 1207 aa12.73□□□□□ -0.37
RAB11FIP3-210ENST00000487899 ZNF274Q96GC6 653 aaPredicted RBP12.73□□□□□ -0.37
RAB11FIP3-210ENST00000487899 YME1L1Q96TA2 773 aa12.73□□□□□ -0.37
RAB11FIP3-210ENST00000487899 ZNF302Q9NR11 478 aa12.73□□□□□ -0.37
RAB11FIP3-210ENST00000487899 SH3GLB2Q9NR46 395 aa12.73□□□□□ -0.37
RAB11FIP3-210ENST00000487899 LMCD1Q9NZU5 365 aa12.73□□□□□ -0.37
RAB11FIP3-210ENST00000487899 TRPV2Q9Y5S1 764 aa12.73□□□□□ -0.37
RAB11FIP3-210ENST00000487899 SMIM35A0A1B0GVV1 85 aa12.72□□□□□ -0.37
RAB11FIP3-210ENST00000487899 MSH4O15457 936 aa12.72□□□□□ -0.37
RAB11FIP3-210ENST00000487899 HBP1O60381 514 aa12.72□□□□□ -0.37
RAB11FIP3-210ENST00000487899 KRT76Q01546 638 aa12.72□□□□□ -0.37
RAB11FIP3-210ENST00000487899 SCRN1Q12765 414 aa12.72□□□□□ -0.37
RAB11FIP3-210ENST00000487899 STK3Q13188 491 aa12.72□□□□□ -0.37
RAB11FIP3-210ENST00000487899 UGCGQ16739 394 aa12.72□□□□□ -0.37
RAB11FIP3-210ENST00000487899 EPC2Q52LR7 807 aa12.72□□□□□ -0.37
RAB11FIP3-210ENST00000487899 FAM160B1Q5W0V3 765 aa12.72□□□□□ -0.37
RAB11FIP3-210ENST00000487899 PDXDC2PQ6P474 469 aa12.72□□□□□ -0.37
RAB11FIP3-210ENST00000487899 SMAP1Q8IYB5 467 aaPredicted RBP12.72□□□□□ -0.37
RAB11FIP3-210ENST00000487899 TRIM22Q8IYM9 498 aa12.72□□□□□ -0.37
RAB11FIP3-210ENST00000487899 DAGLBQ8NCG7 672 aa12.72□□□□□ -0.37
RAB11FIP3-210ENST00000487899 TMEM40Q8WWA1 233 aa12.72□□□□□ -0.37
RAB11FIP3-210ENST00000487899 TBC1D22BQ9NU19 505 aa12.72□□□□□ -0.37
RAB11FIP3-210ENST00000487899 PPP4R2Q9NY27 417 aa12.72□□□□□ -0.37
RAB11FIP3-210ENST00000487899 MAFBQ9Y5Q3 323 aaPredicted RBP12.72□□□□□ -0.37
RAB11FIP3-210ENST00000487899 STK36Q9NRP7 1315 aa12.71□□□□□ -0.37
RAB11FIP3-210ENST00000487899 ZNF862O60290 1169 aa12.71□□□□□ -0.37
RAB11FIP3-210ENST00000487899 DEXIO95424 95 aa12.71□□□□□ -0.37
RAB11FIP3-210ENST00000487899 TDP2O95551 362 aa12.71□□□□□ -0.37
RAB11FIP3-210ENST00000487899 KLRC1P26715 233 aa12.71□□□□□ -0.37
RAB11FIP3-210ENST00000487899 SKIV2LQ15477 1246 aaKnown RBP12.71□□□□□ -0.37
RAB11FIP3-210ENST00000487899 IER5Q5VY09 327 aa12.71□□□□□ -0.37
RAB11FIP3-210ENST00000487899 SWSAP1Q6NVH7 229 aa12.71□□□□□ -0.37
RAB11FIP3-210ENST00000487899 MIS18BP1Q6P0N0 1132 aa12.71□□□□□ -0.37
RAB11FIP3-210ENST00000487899 LINC01465Q8N7H1 131 aa12.71□□□□□ -0.37
RAB11FIP3-210ENST00000487899 TBCKQ8TEA7 893 aa12.71□□□□□ -0.37
RAB11FIP3-210ENST00000487899 SLC5A5Q92911 643 aa12.71□□□□□ -0.37
RAB11FIP3-210ENST00000487899 GJA10Q969M2 543 aa12.71□□□□□ -0.37
RAB11FIP3-210ENST00000487899 ZNF689Q96CS4 500 aaPredicted RBP12.71□□□□□ -0.37
RAB11FIP3-210ENST00000487899 IL17RAQ96F46 866 aa12.71□□□□□ -0.37
RAB11FIP3-210ENST00000487899 NECAB3Q96P71 396 aaPredicted RBP12.71□□□□□ -0.37
RAB11FIP3-210ENST00000487899 CELF4Q9BZC1 486 aaKnown RBP12.71□□□□□ -0.37
RAB11FIP3-210ENST00000487899 TMX1Q9H3N1 280 aa12.71□□□□□ -0.37
RAB11FIP3-210ENST00000487899 PDRG1Q9NUG6 133 aa12.71□□□□□ -0.37
RAB11FIP3-210ENST00000487899 PCDHA4Q9UN74 947 aa12.71□□□□□ -0.37
RAB11FIP3-210ENST00000487899 SQORQ9Y6N5 450 aa12.71□□□□□ -0.37
RAB11FIP3-210ENST00000487899 WDR64B1ANS9 1081 aa12.7□□□□□ -0.38
RAB11FIP3-210ENST00000487899 M0QZ92 97 aa12.7□□□□□ -0.38
RAB11FIP3-210ENST00000487899 ENPP3O14638 875 aa12.7□□□□□ -0.38
RAB11FIP3-210ENST00000487899 CPLX1O14810 134 aa12.7□□□□□ -0.38
RAB11FIP3-210ENST00000487899 MGEA5O60502 916 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms