RNA–Protein interactions for RNA: ENST00000487062.1

SF3A3-206, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 775 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-206ENST00000487062 LRRC63Q05C16 580 aa7.82□□□□□ -1.16
SF3A3-206ENST00000487062 EHHADHQ08426 723 aa7.82□□□□□ -1.16
SF3A3-206ENST00000487062 ITGB3BPQ13352 177 aaPredicted RBP7.82□□□□□ -1.16
SF3A3-206ENST00000487062 GIT2Q14161 759 aa7.82□□□□□ -1.16
SF3A3-206ENST00000487062 HERC4Q5GLZ8 1057 aaPredicted RBP7.82□□□□□ -1.16
SF3A3-206ENST00000487062 WDR78Q5VTH9 848 aa7.82□□□□□ -1.16
SF3A3-206ENST00000487062 SPRYD7Q5W111 196 aa7.82□□□□□ -1.16
SF3A3-206ENST00000487062 RINT1Q6NUQ1 792 aa7.82□□□□□ -1.16
SF3A3-206ENST00000487062 FOXR2Q6PJQ5 311 aa7.82□□□□□ -1.16
SF3A3-206ENST00000487062 CCDC186Q7Z3E2 898 aa7.82□□□□□ -1.16
SF3A3-206ENST00000487062 TMC6Q7Z403 805 aa7.82□□□□□ -1.16
SF3A3-206ENST00000487062 PLPP6Q8IY26 295 aa7.82□□□□□ -1.16
SF3A3-206ENST00000487062 SMAP1Q8IYB5 467 aaPredicted RBP7.82□□□□□ -1.16
SF3A3-206ENST00000487062 MYOCDQ8IZQ8 938 aa7.82□□□□□ -1.16
SF3A3-206ENST00000487062 FAM133AQ8N9E0 248 aa7.82□□□□□ -1.16
SF3A3-206ENST00000487062 BANK1Q8NDB2 785 aa7.82□□□□□ -1.16
SF3A3-206ENST00000487062 MED15Q96RN5 788 aa7.82□□□□□ -1.16
SF3A3-206ENST00000487062 MMP19Q99542 508 aa7.82□□□□□ -1.16
SF3A3-206ENST00000487062 SENP7Q9BQF6 1050 aa7.82□□□□□ -1.16
SF3A3-206ENST00000487062 LXNQ9BS40 222 aa7.82□□□□□ -1.16
SF3A3-206ENST00000487062 ZHX3Q9H4I2 956 aa7.82□□□□□ -1.16
SF3A3-206ENST00000487062 THAP9Q9H5L6 903 aa7.82□□□□□ -1.16
SF3A3-206ENST00000487062 NMRK2Q9NPI5 230 aa7.82□□□□□ -1.16
SF3A3-206ENST00000487062 SAMSN1Q9NSI8 373 aaKnown RBP7.82□□□□□ -1.16
SF3A3-206ENST00000487062 DBR1Q9UK59 544 aaKnown RBP7.82□□□□□ -1.16
SF3A3-206ENST00000487062 ODF2LQ9ULJ1 636 aa7.82□□□□□ -1.16
SF3A3-206ENST00000487062 ZKSCAN5Q9Y2L8 839 aa7.82□□□□□ -1.16
SF3A3-206ENST00000487062 PCDHA10Q9Y5I2 948 aa7.82□□□□□ -1.16
SF3A3-206ENST00000487062 COL4A3BPQ9Y5P4 624 aa7.82□□□□□ -1.16
SF3A3-206ENST00000487062 ARID2Q68CP9 1835 aa7.82□□□□□ -1.16
SF3A3-206ENST00000487062 KCNJ18B7U540 433 aa7.81□□□□□ -1.16
SF3A3-206ENST00000487062 BTBD19C9JJ37 291 aa7.81□□□□□ -1.16
SF3A3-206ENST00000487062 ATP9AO75110 1047 aa7.81□□□□□ -1.16
SF3A3-206ENST00000487062 PSAPP07602 524 aa7.81□□□□□ -1.16
SF3A3-206ENST00000487062 TGFB3P10600 412 aa7.81□□□□□ -1.16
SF3A3-206ENST00000487062 EDNRBP24530 442 aa7.81□□□□□ -1.16
SF3A3-206ENST00000487062 EEF1GP26641 437 aaKnown RBP7.81□□□□□ -1.16
SF3A3-206ENST00000487062 HUNKP57058 714 aa7.81□□□□□ -1.16
SF3A3-206ENST00000487062 PSMC5P62195 406 aa7.81□□□□□ -1.16
SF3A3-206ENST00000487062 RAD51AP2Q09MP3 1159 aa7.81□□□□□ -1.16
SF3A3-206ENST00000487062 KCNJ12Q14500 433 aa7.81□□□□□ -1.16
SF3A3-206ENST00000487062 HSP90AA4PQ58FG1 418 aa7.81□□□□□ -1.16
SF3A3-206ENST00000487062 ARSHQ5FYA8 562 aa7.81□□□□□ -1.16
SF3A3-206ENST00000487062 CENPPQ6IPU0 288 aa7.81□□□□□ -1.16
SF3A3-206ENST00000487062 TTI2Q6NXR4 508 aa7.81□□□□□ -1.16
SF3A3-206ENST00000487062 KCNV1Q6PIU1 500 aa7.81□□□□□ -1.16
SF3A3-206ENST00000487062 STXBP4Q6ZWJ1 553 aa7.81□□□□□ -1.16
SF3A3-206ENST00000487062 OTUD6AQ7L8S5 288 aa7.81□□□□□ -1.16
SF3A3-206ENST00000487062 FILIP1Q7Z7B0 1213 aa7.81□□□□□ -1.16
SF3A3-206ENST00000487062 C4orf19Q8IY42 314 aa7.81□□□□□ -1.16
SF3A3-206ENST00000487062 FAM43AQ8N2R8 423 aa7.81□□□□□ -1.16
SF3A3-206ENST00000487062 CSGALNACT2Q8N6G5 542 aa7.81□□□□□ -1.16
SF3A3-206ENST00000487062 KIAA0895Q8NCT3 520 aa7.81□□□□□ -1.16
SF3A3-206ENST00000487062 CCDC150Q8NCX0 1101 aa7.81□□□□□ -1.16
SF3A3-206ENST00000487062 GPRC5AQ8NFJ5 357 aa7.81□□□□□ -1.16
SF3A3-206ENST00000487062 TMC2Q8TDI7 906 aa7.81□□□□□ -1.16
SF3A3-206ENST00000487062 PIGOQ8TEQ8 1089 aa7.81□□□□□ -1.16
SF3A3-206ENST00000487062 ZNF526Q8TF50 670 aaPredicted RBP7.81□□□□□ -1.16
SF3A3-206ENST00000487062 ATP6V0A1Q93050 837 aa7.81□□□□□ -1.16
SF3A3-206ENST00000487062 PARK7Q99497 189 aaKnown RBP7.81□□□□□ -1.16
SF3A3-206ENST00000487062 REEP2Q9BRK0 252 aa7.81□□□□□ -1.16
SF3A3-206ENST00000487062 TIPINQ9BVW5 301 aa7.81□□□□□ -1.16
SF3A3-206ENST00000487062 SRRTQ9BXP5 876 aaKnown RBP7.81□□□□□ -1.16
SF3A3-206ENST00000487062 ANKEF1Q9NU02 776 aa7.81□□□□□ -1.16
SF3A3-206ENST00000487062 SEL1LQ9UBV2 794 aa7.81□□□□□ -1.16
SF3A3-206ENST00000487062 SLC9A2Q9UBY0 812 aa7.81□□□□□ -1.16
SF3A3-206ENST00000487062 LIMA1Q9UHB6 759 aaKnown RBP7.81□□□□□ -1.16
SF3A3-206ENST00000487062 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP7.81□□□□□ -1.16
SF3A3-206ENST00000487062 IVNS1ABPQ9Y6Y0 642 aa7.81□□□□□ -1.16
SF3A3-206ENST00000487062 NPHP3-ACAD11A0A0J9YXS1 232 aa7.8□□□□□ -1.16
SF3A3-206ENST00000487062 A0A1B0GTH6 734 aa7.8□□□□□ -1.16
SF3A3-206ENST00000487062 TRIM49BA6NDI0 452 aa7.8□□□□□ -1.16
SF3A3-206ENST00000487062 SOWAHBA6NEL2 793 aa7.8□□□□□ -1.16
SF3A3-206ENST00000487062 MANSC4A6NHS7 340 aaPredicted RBP7.8□□□□□ -1.16
SF3A3-206ENST00000487062 ASB14A6NK59 587 aa7.8□□□□□ -1.16
SF3A3-206ENST00000487062 N4BP3O15049 544 aa7.8□□□□□ -1.16
SF3A3-206ENST00000487062 STRNO43815 780 aa7.8□□□□□ -1.16
SF3A3-206ENST00000487062 PEX10O60683 326 aa7.8□□□□□ -1.16
SF3A3-206ENST00000487062 ITGBL1O95965 494 aaPredicted RBP7.8□□□□□ -1.16
SF3A3-206ENST00000487062 TPM1P09493 284 aa7.8□□□□□ -1.16
SF3A3-206ENST00000487062 CYP2C8P10632 490 aa7.8□□□□□ -1.16
SF3A3-206ENST00000487062 KCNA2P16389 499 aa7.8□□□□□ -1.16
SF3A3-206ENST00000487062 PTGS1P23219 599 aa7.8□□□□□ -1.16
SF3A3-206ENST00000487062 GUCY2CP25092 1073 aa7.8□□□□□ -1.16
SF3A3-206ENST00000487062 COPB1P53618 953 aaKnown RBP7.8□□□□□ -1.16
SF3A3-206ENST00000487062 NEDD9Q14511 834 aa7.8□□□□□ -1.16
SF3A3-206ENST00000487062 NR1I3Q14994 352 aa7.8□□□□□ -1.16
SF3A3-206ENST00000487062 Q3C1V9 767 aa7.8□□□□□ -1.16
SF3A3-206ENST00000487062 TCP11X2Q5H9J9 407 aa7.8□□□□□ -1.16
SF3A3-206ENST00000487062 ANKRD40Q6AI12 368 aa7.8□□□□□ -1.16
SF3A3-206ENST00000487062 MIS18BP1Q6P0N0 1132 aa7.8□□□□□ -1.16
SF3A3-206ENST00000487062 PADI6Q6TGC4 694 aa7.8□□□□□ -1.16
SF3A3-206ENST00000487062 SEPT14Q6ZU15 432 aa7.8□□□□□ -1.16
SF3A3-206ENST00000487062 C1orf186Q6ZWK4 172 aa7.8□□□□□ -1.16
SF3A3-206ENST00000487062 SFR1Q86XK3 245 aa7.8□□□□□ -1.16
SF3A3-206ENST00000487062 CREBRFQ8IUR6 639 aa7.8□□□□□ -1.16
SF3A3-206ENST00000487062 VSTM4Q8IW00 320 aa7.8□□□□□ -1.16
SF3A3-206ENST00000487062 ABRAQ8N0Z2 381 aa7.8□□□□□ -1.16
SF3A3-206ENST00000487062 BRI3BPQ8WY22 251 aa7.8□□□□□ -1.16
SF3A3-206ENST00000487062 HPS3Q969F9 1004 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms