RNA–Protein interactions for RNA: ENST00000486810.5

COPS3-209, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 938 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-209ENST00000486810 IGFALSP35858 605 aa6.63□□□□□ -1.35
COPS3-209ENST00000486810 TCEA2Q15560 299 aa6.63□□□□□ -1.35
COPS3-209ENST00000486810 FBLN7Q53RD9 439 aa6.63□□□□□ -1.35
COPS3-209ENST00000486810 BTBD8Q5XKL5 378 aa6.63□□□□□ -1.35
COPS3-209ENST00000486810 CD276Q5ZPR3 534 aa6.63□□□□□ -1.35
COPS3-209ENST00000486810 CPZQ66K79 652 aa6.63□□□□□ -1.35
COPS3-209ENST00000486810 ZCCHC8Q6NZY4 707 aaKnown RBP6.63□□□□□ -1.35
COPS3-209ENST00000486810 NLGN4XQ8N0W4 816 aa6.63□□□□□ -1.35
COPS3-209ENST00000486810 CARFQ8N187 725 aa6.63□□□□□ -1.35
COPS3-209ENST00000486810 NME8Q8N427 588 aa6.63□□□□□ -1.35
COPS3-209ENST00000486810 DTX3Q8N9I9 347 aa6.63□□□□□ -1.35
COPS3-209ENST00000486810 FAM210AQ96ND0 272 aa6.63□□□□□ -1.35
COPS3-209ENST00000486810 SPATA25Q9BR10 227 aa6.63□□□□□ -1.35
COPS3-209ENST00000486810 CEP83Q9Y592 693 aa6.63□□□□□ -1.35
COPS3-209ENST00000486810 TRAF5O00463 557 aa6.62□□□□□ -1.35
COPS3-209ENST00000486810 ENPP3O14638 875 aa6.62□□□□□ -1.35
COPS3-209ENST00000486810 GSTA4O15217 222 aa6.62□□□□□ -1.35
COPS3-209ENST00000486810 ANP32CO43423 234 aa6.62□□□□□ -1.35
COPS3-209ENST00000486810 SMARCA5O60264 1052 aaPredicted RBP6.62□□□□□ -1.35
COPS3-209ENST00000486810 CLASP2O75122 1294 aaKnown RBP6.62□□□□□ -1.35
COPS3-209ENST00000486810 ZBTB48P10074 688 aaPredicted RBP6.62□□□□□ -1.35
COPS3-209ENST00000486810 RPL13P26373 211 aaKnown RBP6.62□□□□□ -1.35
COPS3-209ENST00000486810 SYNPOQ8N3V7 929 aa6.62□□□□□ -1.35
COPS3-209ENST00000486810 MSL3Q8N5Y2 521 aaKnown RBP6.62□□□□□ -1.35
COPS3-209ENST00000486810 TTLL6Q8N841 843 aa6.62□□□□□ -1.35
COPS3-209ENST00000486810 FRAT1Q92837 279 aaPredicted RBP6.62□□□□□ -1.35
COPS3-209ENST00000486810 ITFG2Q969R8 447 aa6.62□□□□□ -1.35
COPS3-209ENST00000486810 XYLT2Q9H1B5 865 aa6.62□□□□□ -1.35
COPS3-209ENST00000486810 ATP23Q9Y6H3 246 aa6.62□□□□□ -1.35
COPS3-209ENST00000486810 ARID1BQ8NFD5 2236 aaPredicted RBP6.62□□□□□ -1.35
COPS3-209ENST00000486810 TLDC2A0PJX2 215 aa6.61□□□□□ -1.35
COPS3-209ENST00000486810 M0R2C6 588 aa6.61□□□□□ -1.35
COPS3-209ENST00000486810 OPA1O60313 960 aa6.61□□□□□ -1.35
COPS3-209ENST00000486810 CDC45O75419 566 aa6.61□□□□□ -1.35
COPS3-209ENST00000486810 NPTXRO95502 500 aa6.61□□□□□ -1.35
COPS3-209ENST00000486810 COL6A1P12109 1028 aa6.61□□□□□ -1.35
COPS3-209ENST00000486810 ZNF28P17035 718 aa6.61□□□□□ -1.35
COPS3-209ENST00000486810 MLLT6P55198 1093 aaPredicted RBP6.61□□□□□ -1.35
COPS3-209ENST00000486810 PFKPQ01813 784 aa6.61□□□□□ -1.35
COPS3-209ENST00000486810 OTOP1Q7RTM1 612 aa6.61□□□□□ -1.35
COPS3-209ENST00000486810 KIAA0907Q7Z7F0 614 aaPredicted RBP6.61□□□□□ -1.35
COPS3-209ENST00000486810 FEZF2Q8TBJ5 459 aa6.61□□□□□ -1.35
COPS3-209ENST00000486810 LUC7LQ9NQ29 371 aaKnown RBP6.61□□□□□ -1.35
COPS3-209ENST00000486810 RIC8BQ9NVN3 520 aa6.61□□□□□ -1.35
COPS3-209ENST00000486810 SAMD15Q9P1V8 674 aa6.61□□□□□ -1.35
COPS3-209ENST00000486810 ZNF839A8K0R7 811 aa6.6□□□□□ -1.35
COPS3-209ENST00000486810 SCDO00767 359 aa6.6□□□□□ -1.35
COPS3-209ENST00000486810 DVL2O14641 736 aa6.6□□□□□ -1.35
COPS3-209ENST00000486810 IL18BPO95998 194 aa6.6□□□□□ -1.35
COPS3-209ENST00000486810 SARSP49591 514 aaKnown RBP6.6□□□□□ -1.35
COPS3-209ENST00000486810 DBPQ10586 325 aaPredicted RBP6.6□□□□□ -1.35
COPS3-209ENST00000486810 DALRD3Q5D0E6 543 aaKnown RBP6.6□□□□□ -1.35
COPS3-209ENST00000486810 LCE4AQ5TA78 99 aa6.6□□□□□ -1.35
COPS3-209ENST00000486810 VASNQ6EMK4 673 aa6.6□□□□□ -1.35
COPS3-209ENST00000486810 ZNF761Q86XN6 746 aaPredicted RBP6.6□□□□□ -1.35
COPS3-209ENST00000486810 SNRNP27Q8WVK2 155 aaKnown RBP6.6□□□□□ -1.35
COPS3-209ENST00000486810 ZCCHC14Q8WYQ9 949 aaKnown RBP6.6□□□□□ -1.35
COPS3-209ENST00000486810 DLG3Q92796 817 aa6.6□□□□□ -1.35
COPS3-209ENST00000486810 NINJ1Q92982 152 aa6.6□□□□□ -1.35
COPS3-209ENST00000486810 TMEM209Q96SK2 561 aa6.6□□□□□ -1.35
COPS3-209ENST00000486810 MYH16Q9H6N6 1097 aa6.6□□□□□ -1.35
COPS3-209ENST00000486810 SLC39A2Q9NP94 309 aa6.6□□□□□ -1.35
COPS3-209ENST00000486810 NTMQ9P121 344 aa6.6□□□□□ -1.35
COPS3-209ENST00000486810 OTOL1A6NHN0 477 aaPredicted RBP6.59□□□□□ -1.35
COPS3-209ENST00000486810 RASSF10A6NK89 507 aa6.59□□□□□ -1.35
COPS3-209ENST00000486810 DDX3XO00571 662 aaKnown RBP eCLIP6.59□□□□□ -1.35
COPS3-209ENST00000486810 INHBBP09529 407 aa6.59□□□□□ -1.35
COPS3-209ENST00000486810 SKIDA1Q1XH10 827 aa6.59□□□□□ -1.35
COPS3-209ENST00000486810 PIK3R6Q5UE93 754 aa6.59□□□□□ -1.35
COPS3-209ENST00000486810 CDCA2Q69YH5 1023 aaPredicted RBP6.59□□□□□ -1.35
COPS3-209ENST00000486810 TTLL7Q6ZT98 887 aa6.59□□□□□ -1.35
COPS3-209ENST00000486810 TTLL10Q6ZVT0 673 aa6.59□□□□□ -1.35
COPS3-209ENST00000486810 ADAMTS17Q8TE56 1095 aa6.59□□□□□ -1.35
COPS3-209ENST00000486810 BORCS6Q96GS4 357 aa6.59□□□□□ -1.35
COPS3-209ENST00000486810 C20orf173Q96LM9 149 aa6.59□□□□□ -1.35
COPS3-209ENST00000486810 MTFR1LQ9H019 292 aa6.59□□□□□ -1.35
COPS3-209ENST00000486810 PARD6AQ9NPB6 346 aa6.59□□□□□ -1.35
COPS3-209ENST00000486810 DLL4Q9NR61 685 aa6.59□□□□□ -1.35
COPS3-209ENST00000486810 INTS7Q9NVH2 962 aaKnown RBP6.59□□□□□ -1.35
COPS3-209ENST00000486810 BTBD7Q9P203 1132 aa6.59□□□□□ -1.35
COPS3-209ENST00000486810 MAGEC2Q9UBF1 373 aaPredicted RBP6.59□□□□□ -1.35
COPS3-209ENST00000486810 CROTQ9UKG9 612 aa6.59□□□□□ -1.35
COPS3-209ENST00000486810 B3GALT1Q9Y5Z6 326 aa6.59□□□□□ -1.35
COPS3-209ENST00000486810 SLC12A8A0AV02 714 aa6.58□□□□□ -1.36
COPS3-209ENST00000486810 KIF1CO43896 1103 aaKnown RBP6.58□□□□□ -1.36
COPS3-209ENST00000486810 NOBOXO60393 691 aa6.58□□□□□ -1.36
COPS3-209ENST00000486810 ENO2P09104 434 aaPredicted RBP6.58□□□□□ -1.36
COPS3-209ENST00000486810 CCDC172P0C7W6 258 aa6.58□□□□□ -1.36
COPS3-209ENST00000486810 JMJD7P0C870 316 aa6.58□□□□□ -1.36
COPS3-209ENST00000486810 HOXA5P20719 270 aa6.58□□□□□ -1.36
COPS3-209ENST00000486810 MC4RP32245 332 aa6.58□□□□□ -1.36
COPS3-209ENST00000486810 GJA4P35212 333 aa6.58□□□□□ -1.36
COPS3-209ENST00000486810 KCNC1P48547 511 aa6.58□□□□□ -1.36
COPS3-209ENST00000486810 PLEKHG4Q58EX7 1191 aa6.58□□□□□ -1.36
COPS3-209ENST00000486810 CREB3L3Q68CJ9 461 aa6.58□□□□□ -1.36
COPS3-209ENST00000486810 DDX53Q86TM3 631 aaKnown RBP6.58□□□□□ -1.36
COPS3-209ENST00000486810 C2orf69Q8N8R5 385 aa6.58□□□□□ -1.36
COPS3-209ENST00000486810 CLIC6Q96NY7 704 aa6.58□□□□□ -1.36
COPS3-209ENST00000486810 MYCBPQ99417 103 aaPredicted RBP6.58□□□□□ -1.36
COPS3-209ENST00000486810 FEZ1Q99689 392 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms