RNA–Protein interactions for RNA: ENST00000486806.1

MCF2L-227, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 361 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-227ENST00000486806 RASSF8Q8NHQ8 419 aa10.71□□□□□ -0.69
MCF2L-227ENST00000486806 RAD54LQ92698 747 aa10.71□□□□□ -0.69
MCF2L-227ENST00000486806 KAT2BQ92831 832 aa10.71□□□□□ -0.69
MCF2L-227ENST00000486806 DHX58Q96C10 678 aa10.71□□□□□ -0.69
MCF2L-227ENST00000486806 CDK5RAP3Q96JB5 506 aa10.71□□□□□ -0.69
MCF2L-227ENST00000486806 CUEDC2Q9H467 287 aa10.71□□□□□ -0.69
MCF2L-227ENST00000486806 SMARCAD1Q9H4L7 1026 aa10.71□□□□□ -0.69
MCF2L-227ENST00000486806 AZI2Q9H6S1 392 aa10.71□□□□□ -0.69
MCF2L-227ENST00000486806 MAGEF1Q9HAY2 307 aa10.71□□□□□ -0.69
MCF2L-227ENST00000486806 SPC25Q9HBM1 224 aa10.71□□□□□ -0.69
MCF2L-227ENST00000486806 DACT1Q9NYF0 836 aa10.71□□□□□ -0.69
MCF2L-227ENST00000486806 USP25Q9UHP3 1055 aa10.71□□□□□ -0.69
MCF2L-227ENST00000486806 FRMPD3Q5JV73 1810 aa10.7□□□□□ -0.7
MCF2L-227ENST00000486806 E9PMD0 336 aa10.7□□□□□ -0.7
MCF2L-227ENST00000486806 HAS3O00219 553 aa10.7□□□□□ -0.7
MCF2L-227ENST00000486806 EYA4O95677 639 aa10.7□□□□□ -0.7
MCF2L-227ENST00000486806 SLFN14P0C7P3 912 aa10.7□□□□□ -0.7
MCF2L-227ENST00000486806 YWHABP31946 246 aaKnown RBP10.7□□□□□ -0.7
MCF2L-227ENST00000486806 PSMC6P62333 389 aa10.7□□□□□ -0.7
MCF2L-227ENST00000486806 PLCB4Q15147 1175 aa10.7□□□□□ -0.7
MCF2L-227ENST00000486806 LRRC41Q15345 812 aa10.7□□□□□ -0.7
MCF2L-227ENST00000486806 ZRSR1Q15695 479 aaKnown RBP10.7□□□□□ -0.7
MCF2L-227ENST00000486806 KLHL40Q2TBA0 621 aa10.7□□□□□ -0.7
MCF2L-227ENST00000486806 LONRF3Q496Y0 759 aa10.7□□□□□ -0.7
MCF2L-227ENST00000486806 BRDTQ58F21 947 aaPredicted RBP10.7□□□□□ -0.7
MCF2L-227ENST00000486806 XKR3Q5GH77 459 aa10.7□□□□□ -0.7
MCF2L-227ENST00000486806 UTP14CQ5TAP6 766 aaKnown RBP10.7□□□□□ -0.7
MCF2L-227ENST00000486806 KRBA2Q6ZNG9 492 aa10.7□□□□□ -0.7
MCF2L-227ENST00000486806 ANO5Q75V66 913 aa10.7□□□□□ -0.7
MCF2L-227ENST00000486806 ATP8B4Q8TF62 1192 aa10.7□□□□□ -0.7
MCF2L-227ENST00000486806 LARP4BQ92615 738 aaKnown RBP10.7□□□□□ -0.7
MCF2L-227ENST00000486806 GLG1Q92896 1179 aa10.7□□□□□ -0.7
MCF2L-227ENST00000486806 FAM167AQ96KS9 214 aa10.7□□□□□ -0.7
MCF2L-227ENST00000486806 TIGD1Q96MW7 591 aa10.7□□□□□ -0.7
MCF2L-227ENST00000486806 NACC1Q96RE7 527 aa10.7□□□□□ -0.7
MCF2L-227ENST00000486806 CEP89Q96ST8 783 aa10.7□□□□□ -0.7
MCF2L-227ENST00000486806 PLIN2Q99541 437 aa10.7□□□□□ -0.7
MCF2L-227ENST00000486806 MTRQ99707 1265 aa10.7□□□□□ -0.7
MCF2L-227ENST00000486806 PANK2Q9BZ23 570 aa10.7□□□□□ -0.7
MCF2L-227ENST00000486806 MCOLN1Q9GZU1 580 aa10.7□□□□□ -0.7
MCF2L-227ENST00000486806 KBTBD4Q9NVX7 518 aa10.7□□□□□ -0.7
MCF2L-227ENST00000486806 ERAP1Q9NZ08 941 aa10.7□□□□□ -0.7
MCF2L-227ENST00000486806 SERTAD1Q9UHV2 236 aa10.7□□□□□ -0.7
MCF2L-227ENST00000486806 DBR1Q9UK59 544 aaKnown RBP10.7□□□□□ -0.7
MCF2L-227ENST00000486806 ZNF215Q9UL58 517 aaPredicted RBP10.7□□□□□ -0.7
MCF2L-227ENST00000486806 OGDHLQ9ULD0 1010 aa10.7□□□□□ -0.7
MCF2L-227ENST00000486806 TMEM150BA6NC51 233 aa10.69□□□□□ -0.7
MCF2L-227ENST00000486806 ZBTB42B2RXF5 422 aa10.69□□□□□ -0.7
MCF2L-227ENST00000486806 H3BRB1 525 aa10.69□□□□□ -0.7
MCF2L-227ENST00000486806 ZBTB39O15060 712 aa10.69□□□□□ -0.7
MCF2L-227ENST00000486806 KPNA6O60684 536 aa10.69□□□□□ -0.7
MCF2L-227ENST00000486806 KINO60870 393 aaKnown RBP10.69□□□□□ -0.7
MCF2L-227ENST00000486806 PLA2G4BP0C869 781 aa10.69□□□□□ -0.7
MCF2L-227ENST00000486806 XRCC6P12956 609 aaKnown RBP eCLIP10.69□□□□□ -0.7
MCF2L-227ENST00000486806 MARK3P27448 753 aa10.69□□□□□ -0.7
MCF2L-227ENST00000486806 RARRES1P49788 294 aa10.69□□□□□ -0.7
MCF2L-227ENST00000486806 SLC12A3P55017 1021 aa10.69□□□□□ -0.7
MCF2L-227ENST00000486806 GNASQ5JWF2 1037 aa10.69□□□□□ -0.7
MCF2L-227ENST00000486806 PLA2G4FQ68DD2 849 aa10.69□□□□□ -0.7
MCF2L-227ENST00000486806 SH3RF1Q7Z6J0 888 aa10.69□□□□□ -0.7
MCF2L-227ENST00000486806 RNF180Q86T96 592 aa10.69□□□□□ -0.7
MCF2L-227ENST00000486806 ELOA2Q8IYF1 753 aaPredicted RBP10.69□□□□□ -0.7
MCF2L-227ENST00000486806 PIGOQ8TEQ8 1089 aa10.69□□□□□ -0.7
MCF2L-227ENST00000486806 BBXQ8WY36 941 aaPredicted RBP10.69□□□□□ -0.7
MCF2L-227ENST00000486806 DEFB118Q96PH6 123 aa10.69□□□□□ -0.7
MCF2L-227ENST00000486806 NIFKQ9BYG3 293 aaKnown RBP10.69□□□□□ -0.7
MCF2L-227ENST00000486806 CRISPLD2Q9H0B8 497 aa10.69□□□□□ -0.7
MCF2L-227ENST00000486806 RNF208Q9H0X6 261 aa10.69□□□□□ -0.7
MCF2L-227ENST00000486806 BHMT2Q9H2M3 363 aa10.69□□□□□ -0.7
MCF2L-227ENST00000486806 TNMDQ9H2S6 317 aa10.69□□□□□ -0.7
MCF2L-227ENST00000486806 TUT1Q9H6E5 874 aaKnown RBP10.69□□□□□ -0.7
MCF2L-227ENST00000486806 ANKEF1Q9NU02 776 aa10.69□□□□□ -0.7
MCF2L-227ENST00000486806 DNM3Q9UQ16 869 aa10.69□□□□□ -0.7
MCF2L-227ENST00000486806 A0A087WWV3 80 aa10.68□□□□□ -0.7
MCF2L-227ENST00000486806 MOXD2PA6NHM9 499 aa10.68□□□□□ -0.7
MCF2L-227ENST00000486806 DNM1LO00429 736 aa10.68□□□□□ -0.7
MCF2L-227ENST00000486806 ZEB2O60315 1214 aa10.68□□□□□ -0.7
MCF2L-227ENST00000486806 ASGR1P07306 291 aa10.68□□□□□ -0.7
MCF2L-227ENST00000486806 GJB1P08034 283 aa10.68□□□□□ -0.7
MCF2L-227ENST00000486806 MYL3P08590 195 aa10.68□□□□□ -0.7
MCF2L-227ENST00000486806 HOXC8P31273 242 aa10.68□□□□□ -0.7
MCF2L-227ENST00000486806 MCM6Q14566 821 aa10.68□□□□□ -0.7
MCF2L-227ENST00000486806 MFSD10Q14728 455 aa10.68□□□□□ -0.7
MCF2L-227ENST00000486806 TARBP2Q15633 366 aaKnown RBP10.68□□□□□ -0.7
MCF2L-227ENST00000486806 KCNA10Q16322 511 aa10.68□□□□□ -0.7
MCF2L-227ENST00000486806 CEP57L1Q8IYX8 460 aa10.68□□□□□ -0.7
MCF2L-227ENST00000486806 SYT2Q8N9I0 419 aaPredicted RBP10.68□□□□□ -0.7
MCF2L-227ENST00000486806 PCSK9Q8NBP7 692 aaKnown RBP10.68□□□□□ -0.7
MCF2L-227ENST00000486806 CNNM3Q8NE01 707 aa10.68□□□□□ -0.7
MCF2L-227ENST00000486806 PAGE5Q96GU1 130 aa10.68□□□□□ -0.7
MCF2L-227ENST00000486806 TSEN34Q9BSV6 310 aaKnown RBP10.68□□□□□ -0.7
MCF2L-227ENST00000486806 MTG1Q9BT17 334 aaPredicted RBP10.68□□□□□ -0.7
MCF2L-227ENST00000486806 KATNAL1Q9BW62 490 aa10.68□□□□□ -0.7
MCF2L-227ENST00000486806 RNPEPQ9H4A4 650 aa10.68□□□□□ -0.7
MCF2L-227ENST00000486806 CLSTN2Q9H4D0 955 aa10.68□□□□□ -0.7
MCF2L-227ENST00000486806 CYP26B1Q9NR63 512 aa10.68□□□□□ -0.7
MCF2L-227ENST00000486806 SEPT9Q9UHD8 586 aaPredicted RBP10.68□□□□□ -0.7
MCF2L-227ENST00000486806 PPME1Q9Y570 386 aa10.68□□□□□ -0.7
MCF2L-227ENST00000486806 COL1A2P08123 1366 aa10.67□□□□□ -0.7
MCF2L-227ENST00000486806 HBP1O60381 514 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms