RNA–Protein interactions for RNA: ENST00000486724.5

APTX-228, Transcript of aprataxin, humanhuman

TSL 4

Gene APTX, Length 556 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-228ENST00000486724 SPOUT1Q5T280 376 aaKnown RBP9.78□□□□□ -0.84
APTX-228ENST00000486724 RCSD1Q6JBY9 416 aa9.78□□□□□ -0.84
APTX-228ENST00000486724 PHLDB3Q6NSJ2 640 aa9.78□□□□□ -0.84
APTX-228ENST00000486724 POTEGQ6S5H5 508 aa9.78□□□□□ -0.84
APTX-228ENST00000486724 SMAP1Q8IYB5 467 aaPredicted RBP9.78□□□□□ -0.84
APTX-228ENST00000486724 THNSL1Q8IYQ7 743 aa9.78□□□□□ -0.84
APTX-228ENST00000486724 MAML2Q8IZL2 1156 aaPredicted RBP9.78□□□□□ -0.84
APTX-228ENST00000486724 ZNF444Q8N0Y2 327 aaPredicted RBP9.78□□□□□ -0.84
APTX-228ENST00000486724 STK11IPQ8N1F8 1099 aa9.78□□□□□ -0.84
APTX-228ENST00000486724 KDF1Q8NAX2 398 aaPredicted RBP9.78□□□□□ -0.84
APTX-228ENST00000486724 CLEC4DQ8WXI8 215 aa9.78□□□□□ -0.84
APTX-228ENST00000486724 CHMP4CQ96CF2 233 aa9.78□□□□□ -0.84
APTX-228ENST00000486724 TCF25Q9BQ70 676 aa9.78□□□□□ -0.84
APTX-228ENST00000486724 EHMT1Q9H9B1 1298 aa9.78□□□□□ -0.84
APTX-228ENST00000486724 KCNK12Q9HB15 430 aa9.78□□□□□ -0.84
APTX-228ENST00000486724 ZNF287Q9HBT7 754 aa9.78□□□□□ -0.84
APTX-228ENST00000486724 TMEM260Q9NX78 707 aa9.78□□□□□ -0.84
APTX-228ENST00000486724 DDX41Q9UJV9 622 aaKnown RBP9.78□□□□□ -0.84
APTX-228ENST00000486724 HCFC2Q9Y5Z7 792 aa9.78□□□□□ -0.84
APTX-228ENST00000486724 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.78□□□□□ -0.84
APTX-228ENST00000486724 HELZ2Q9BYK8 2649 aaKnown RBP9.78□□□□□ -0.84
APTX-228ENST00000486724 DMXL2Q8TDJ6 3036 aa9.77□□□□□ -0.85
APTX-228ENST00000486724 HIDE1A8MVS5 230 aa9.77□□□□□ -0.85
APTX-228ENST00000486724 C1QTNF9BB2RNN3 333 aa9.77□□□□□ -0.85
APTX-228ENST00000486724 GOLIM4O00461 696 aa9.77□□□□□ -0.85
APTX-228ENST00000486724 NARSO43776 548 aaKnown RBP9.77□□□□□ -0.85
APTX-228ENST00000486724 TBC1D4O60343 1298 aa9.77□□□□□ -0.85
APTX-228ENST00000486724 CDC45O75419 566 aa9.77□□□□□ -0.85
APTX-228ENST00000486724 C1QTNF9P0C862 333 aa9.77□□□□□ -0.85
APTX-228ENST00000486724 GNAT1P11488 350 aa9.77□□□□□ -0.85
APTX-228ENST00000486724 RING1Q06587 406 aa9.77□□□□□ -0.85
APTX-228ENST00000486724 PDE4CQ08493 712 aa9.77□□□□□ -0.85
APTX-228ENST00000486724 LPIN1Q14693 890 aa9.77□□□□□ -0.85
APTX-228ENST00000486724 SBK1Q52WX2 424 aa9.77□□□□□ -0.85
APTX-228ENST00000486724 RARS2Q5T160 578 aaKnown RBP9.77□□□□□ -0.85
APTX-228ENST00000486724 N4BP2L1Q5TBK1 243 aaPredicted RBP9.77□□□□□ -0.85
APTX-228ENST00000486724 RASGRP2Q7LDG7 609 aa9.77□□□□□ -0.85
APTX-228ENST00000486724 OTOP3Q7RTS5 596 aa9.77□□□□□ -0.85
APTX-228ENST00000486724 GPR20Q99678 358 aa9.77□□□□□ -0.85
APTX-228ENST00000486724 NGRNQ9NPE2 291 aaKnown RBP9.77□□□□□ -0.85
APTX-228ENST00000486724 IGSF9Q9P2J2 1179 aa9.77□□□□□ -0.85
APTX-228ENST00000486724 PNMA2Q9UL42 364 aa9.77□□□□□ -0.85
APTX-228ENST00000486724 CA14Q9ULX7 337 aa9.77□□□□□ -0.85
APTX-228ENST00000486724 LZTS1Q9Y250 596 aa9.77□□□□□ -0.85
APTX-228ENST00000486724 MRVI1Q9Y6F6 885 aa9.77□□□□□ -0.85
APTX-228ENST00000486724 CACNA1IQ9P0X4 2223 aa9.76□□□□□ -0.85
APTX-228ENST00000486724 NAV2Q8IVL1 2488 aa9.76□□□□□ -0.85
APTX-228ENST00000486724 TMEM8BA6NDV4 472 aa9.76□□□□□ -0.85
APTX-228ENST00000486724 H3BRB1 525 aa9.76□□□□□ -0.85
APTX-228ENST00000486724 LAMTOR5O43504 91 aa9.76□□□□□ -0.85
APTX-228ENST00000486724 CHRNA1P02708 482 aa9.76□□□□□ -0.85
APTX-228ENST00000486724 ADD2P35612 726 aa9.76□□□□□ -0.85
APTX-228ENST00000486724 SPEM2Q0P670 501 aa9.76□□□□□ -0.85
APTX-228ENST00000486724 APOBRQ0VD83 1088 aa9.76□□□□□ -0.85
APTX-228ENST00000486724 STXBP2Q15833 593 aa9.76□□□□□ -0.85
APTX-228ENST00000486724 CCDC149Q6ZUS6 474 aa9.76□□□□□ -0.85
APTX-228ENST00000486724 ZBTB44Q8NCP5 570 aa9.76□□□□□ -0.85
APTX-228ENST00000486724 PJA1Q8NG27 643 aa9.76□□□□□ -0.85
APTX-228ENST00000486724 LINC01599Q8WXQ3 324 aa9.76□□□□□ -0.85
APTX-228ENST00000486724 DNAJC2Q99543 621 aaKnown RBP9.76□□□□□ -0.85
APTX-228ENST00000486724 C16orf70Q9BSU1 422 aa9.76□□□□□ -0.85
APTX-228ENST00000486724 RNPEPQ9H4A4 650 aa9.76□□□□□ -0.85
APTX-228ENST00000486724 TUT1Q9H6E5 874 aaKnown RBP9.76□□□□□ -0.85
APTX-228ENST00000486724 DZANK1Q9NVP4 752 aa9.76□□□□□ -0.85
APTX-228ENST00000486724 PUF60Q9UHX1 559 aaKnown RBP9.76□□□□□ -0.85
APTX-228ENST00000486724 PATJQ8NI35 1801 aa9.76□□□□□ -0.85
APTX-228ENST00000486724 MINDY4BA8MYZ0 360 aa9.75□□□□□ -0.85
APTX-228ENST00000486724 TRIM6-TRIM34B2RNG4 842 aa9.75□□□□□ -0.85
APTX-228ENST00000486724 TAF4O00268 1085 aa9.75□□□□□ -0.85
APTX-228ENST00000486724 LILRB5O75023 590 aa9.75□□□□□ -0.85
APTX-228ENST00000486724 LRP3O75074 770 aa9.75□□□□□ -0.85
APTX-228ENST00000486724 PRDM1O75626 825 aa9.75□□□□□ -0.85
APTX-228ENST00000486724 TSPY3P0CV98 308 aa9.75□□□□□ -0.85
APTX-228ENST00000486724 TSPY8P0CW00 308 aa9.75□□□□□ -0.85
APTX-228ENST00000486724 PTMSP20962 102 aa9.75□□□□□ -0.85
APTX-228ENST00000486724 GATMP50440 423 aa9.75□□□□□ -0.85
APTX-228ENST00000486724 NONOQ15233 471 aaKnown RBP eCLIP9.75□□□□□ -0.85
APTX-228ENST00000486724 HSDL1Q3SXM5 330 aa9.75□□□□□ -0.85
APTX-228ENST00000486724 SLFNL1Q499Z3 407 aa9.75□□□□□ -0.85
APTX-228ENST00000486724 CASC1Q6TDU7 716 aa9.75□□□□□ -0.85
APTX-228ENST00000486724 TSHZ1Q6ZSZ6 1077 aa9.75□□□□□ -0.85
APTX-228ENST00000486724 NEDD1Q8NHV4 660 aa9.75□□□□□ -0.85
APTX-228ENST00000486724 MRPS27Q92552 414 aaKnown RBP9.75□□□□□ -0.85
APTX-228ENST00000486724 EVI5LQ96CN4 794 aa9.75□□□□□ -0.85
APTX-228ENST00000486724 SPATA33Q96N06 139 aa9.75□□□□□ -0.85
APTX-228ENST00000486724 FTHL17Q9BXU8 183 aa9.75□□□□□ -0.85
APTX-228ENST00000486724 BOLA2Q9H3K6 86 aa9.75□□□□□ -0.85
APTX-228ENST00000486724 ARHGEF3Q9NR81 526 aa9.75□□□□□ -0.85
APTX-228ENST00000486724 SPATA6Q9NWH7 488 aaPredicted RBP9.75□□□□□ -0.85
APTX-228ENST00000486724 ZSCAN32Q9NX65 697 aa9.75□□□□□ -0.85
APTX-228ENST00000486724 PRDM4Q9UKN5 801 aa9.75□□□□□ -0.85
APTX-228ENST00000486724 LRFN2Q9ULH4 789 aa9.75□□□□□ -0.85
APTX-228ENST00000486724 CNOT1A5YKK6 2376 aaKnown RBP9.74□□□□□ -0.85
APTX-228ENST00000486724 SRRM3A6NNA2 597 aaPredicted RBP9.74□□□□□ -0.85
APTX-228ENST00000486724 ESPNB1AK53 854 aa9.74□□□□□ -0.85
APTX-228ENST00000486724 SRFP11831 508 aa9.74□□□□□ -0.85
APTX-228ENST00000486724 SCG2P13521 617 aa9.74□□□□□ -0.85
APTX-228ENST00000486724 GLULP15104 373 aa9.74□□□□□ -0.85
APTX-228ENST00000486724 PLCB3Q01970 1234 aa9.74□□□□□ -0.85
APTX-228ENST00000486724 CSTF1Q05048 431 aaKnown RBP9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms