RNA–Protein interactions for RNA: ENST00000486711.1

SMC4-218, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 621 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-218ENST00000486711 SUMO1P63165 101 aaKnown RBP6.5□□□□□ -1.37
SMC4-218ENST00000486711 CRIP3Q6Q6R5 217 aa6.5□□□□□ -1.37
SMC4-218ENST00000486711 KATNBL1Q9H079 304 aa6.5□□□□□ -1.37
SMC4-218ENST00000486711 PLAAQ9Y263 795 aa6.5□□□□□ -1.37
SMC4-218ENST00000486711 MRPS23Q9Y3D9 190 aaKnown RBP6.5□□□□□ -1.37
SMC4-218ENST00000486711 PPM1GO15355 546 aaPredicted RBP6.49□□□□□ -1.37
SMC4-218ENST00000486711 IBSPP21815 317 aaPredicted RBP6.49□□□□□ -1.37
SMC4-218ENST00000486711 USP10Q14694 798 aaKnown RBP6.49□□□□□ -1.37
SMC4-218ENST00000486711 ZNF568Q3ZCX4 644 aa6.49□□□□□ -1.37
SMC4-218ENST00000486711 HS1BP3Q53T59 392 aa6.49□□□□□ -1.37
SMC4-218ENST00000486711 FAM209AQ5JX71 171 aa6.49□□□□□ -1.37
SMC4-218ENST00000486711 FOXB2Q5VYV0 432 aa6.49□□□□□ -1.37
SMC4-218ENST00000486711 GPR155Q7Z3F1 870 aa6.49□□□□□ -1.37
SMC4-218ENST00000486711 FILIP1Q7Z7B0 1213 aa6.49□□□□□ -1.37
SMC4-218ENST00000486711 ZCRB1Q8TBF4 217 aaKnown RBP6.49□□□□□ -1.37
SMC4-218ENST00000486711 Q8TCH9 128 aa6.49□□□□□ -1.37
SMC4-218ENST00000486711 EXOC2Q96KP1 924 aa6.49□□□□□ -1.37
SMC4-218ENST00000486711 LMF1Q96S06 567 aa6.49□□□□□ -1.37
SMC4-218ENST00000486711 VPS11Q9H270 941 aa6.49□□□□□ -1.37
SMC4-218ENST00000486711 SPC25Q9HBM1 224 aa6.49□□□□□ -1.37
SMC4-218ENST00000486711 ACOT7O00154 380 aa6.48□□□□□ -1.37
SMC4-218ENST00000486711 AQP7O14520 342 aa6.48□□□□□ -1.37
SMC4-218ENST00000486711 PLD2O14939 933 aa6.48□□□□□ -1.37
SMC4-218ENST00000486711 DNAJC6O75061 913 aa6.48□□□□□ -1.37
SMC4-218ENST00000486711 IL18BPO95998 194 aa6.48□□□□□ -1.37
SMC4-218ENST00000486711 APPP05067 770 aa6.48□□□□□ -1.37
SMC4-218ENST00000486711 R3HDM1Q15032 1099 aaKnown RBP6.48□□□□□ -1.37
SMC4-218ENST00000486711 TKFCQ3LXA3 575 aa6.48□□□□□ -1.37
SMC4-218ENST00000486711 MAMDC2Q7Z304 686 aaPredicted RBP6.48□□□□□ -1.37
SMC4-218ENST00000486711 ANKRD13AQ8IZ07 590 aa6.48□□□□□ -1.37
SMC4-218ENST00000486711 NLGN4XQ8N0W4 816 aa6.48□□□□□ -1.37
SMC4-218ENST00000486711 WWC2-AS2Q96NR7 200 aa6.48□□□□□ -1.37
SMC4-218ENST00000486711 SORCS2Q96PQ0 1159 aa6.48□□□□□ -1.37
SMC4-218ENST00000486711 TACO1Q9BSH4 297 aaKnown RBP6.48□□□□□ -1.37
SMC4-218ENST00000486711 CD244Q9BZW8 370 aa6.48□□□□□ -1.37
SMC4-218ENST00000486711 TESMINQ9Y4I5 508 aa6.48□□□□□ -1.37
SMC4-218ENST00000486711 CD2APQ9Y5K6 639 aa6.48□□□□□ -1.37
SMC4-218ENST00000486711 ASXL2Q76L83 1435 aa6.48□□□□□ -1.37
SMC4-218ENST00000486711 CUTAO60888 179 aa6.47□□□□□ -1.37
SMC4-218ENST00000486711 DBPQ10586 325 aaPredicted RBP6.47□□□□□ -1.37
SMC4-218ENST00000486711 PAK1Q13153 545 aa6.47□□□□□ -1.37
SMC4-218ENST00000486711 FNDC3BQ53EP0 1204 aaKnown RBP6.47□□□□□ -1.37
SMC4-218ENST00000486711 BTBD8Q5XKL5 378 aa6.47□□□□□ -1.37
SMC4-218ENST00000486711 DPP8Q6V1X1 898 aaPredicted RBP6.47□□□□□ -1.37
SMC4-218ENST00000486711 USP51Q70EK9 711 aa6.47□□□□□ -1.37
SMC4-218ENST00000486711 MTDHQ86UE4 582 aaKnown RBP6.47□□□□□ -1.37
SMC4-218ENST00000486711 Q8N1X5 172 aa6.47□□□□□ -1.37
SMC4-218ENST00000486711 LRRC37BQ96QE4 947 aa6.47□□□□□ -1.37
SMC4-218ENST00000486711 ZNF747Q9BV97 191 aa6.47□□□□□ -1.37
SMC4-218ENST00000486711 MRPL4Q9BYD3 311 aaKnown RBP6.47□□□□□ -1.37
SMC4-218ENST00000486711 NCOA5Q9HCD5 579 aaKnown RBP6.47□□□□□ -1.37
SMC4-218ENST00000486711 SRPK3Q9UPE1 567 aa6.47□□□□□ -1.37
SMC4-218ENST00000486711 TRAF6Q9Y4K3 522 aa6.47□□□□□ -1.37
SMC4-218ENST00000486711 CYR61O00622 381 aa6.46□□□□□ -1.38
SMC4-218ENST00000486711 FZD7O75084 574 aa6.46□□□□□ -1.38
SMC4-218ENST00000486711 POLD1P28340 1107 aa6.46□□□□□ -1.38
SMC4-218ENST00000486711 PABPC4Q13310 644 aaKnown RBP eCLIP6.46□□□□□ -1.38
SMC4-218ENST00000486711 GPR19Q15760 415 aa6.46□□□□□ -1.38
SMC4-218ENST00000486711 PTPROQ16827 1216 aa6.46□□□□□ -1.38
SMC4-218ENST00000486711 SPDYAQ5MJ70 313 aa6.46□□□□□ -1.38
SMC4-218ENST00000486711 NIM1KQ8IY84 436 aa6.46□□□□□ -1.38
SMC4-218ENST00000486711 GIMAP8Q8ND71 665 aaPredicted RBP6.46□□□□□ -1.38
SMC4-218ENST00000486711 SH3RF2Q8TEC5 729 aa6.46□□□□□ -1.38
SMC4-218ENST00000486711 PTPRN2Q92932 1015 aa6.46□□□□□ -1.38
SMC4-218ENST00000486711 NINJ1Q92982 152 aa6.46□□□□□ -1.38
SMC4-218ENST00000486711 GNRHR2Q96P88 292 aa6.46□□□□□ -1.38
SMC4-218ENST00000486711 CARD11Q9BXL7 1154 aa6.46□□□□□ -1.38
SMC4-218ENST00000486711 SCAND2PQ9GZW5 306 aaPredicted RBP6.46□□□□□ -1.38
SMC4-218ENST00000486711 SLC39A2Q9NP94 309 aa6.46□□□□□ -1.38
SMC4-218ENST00000486711 IFT57Q9NWB7 429 aa6.46□□□□□ -1.38
SMC4-218ENST00000486711 TCRBV5S4A2TA0A5A2 114 aa6.45□□□□□ -1.38
SMC4-218ENST00000486711 WNT9AO14904 365 aa6.45□□□□□ -1.38
SMC4-218ENST00000486711 RFPL3O75679 317 aa6.45□□□□□ -1.38
SMC4-218ENST00000486711 PTPN1P18031 435 aaKnown RBP6.45□□□□□ -1.38
SMC4-218ENST00000486711 NAT1P18440 290 aa6.45□□□□□ -1.38
SMC4-218ENST00000486711 C21orf62-AS1Q17RA5 79 aa6.45□□□□□ -1.38
SMC4-218ENST00000486711 DALRD3Q5D0E6 543 aaKnown RBP6.45□□□□□ -1.38
SMC4-218ENST00000486711 TCTN3Q6NUS6 607 aa6.45□□□□□ -1.38
SMC4-218ENST00000486711 FBXW5Q969U6 566 aa6.45□□□□□ -1.38
SMC4-218ENST00000486711 MFSD3Q96ES6 412 aa6.45□□□□□ -1.38
SMC4-218ENST00000486711 NEIL1Q96FI4 390 aaPredicted RBP6.45□□□□□ -1.38
SMC4-218ENST00000486711 RIC8BQ9NVN3 520 aa6.45□□□□□ -1.38
SMC4-218ENST00000486711 ARHGAP28Q9P2N2 729 aa6.45□□□□□ -1.38
SMC4-218ENST00000486711 SFMBT1Q9UHJ3 866 aa6.45□□□□□ -1.38
SMC4-218ENST00000486711 ZFR2Q9UPR6 939 aaKnown RBP6.45□□□□□ -1.38
SMC4-218ENST00000486711 hCG_2014768A0A024R1R8 64 aa6.44□□□□□ -1.38
SMC4-218ENST00000486711 FOXS1O43638 330 aa6.44□□□□□ -1.38
SMC4-218ENST00000486711 EFCAB14O75071 495 aa6.44□□□□□ -1.38
SMC4-218ENST00000486711 RAPGEF3O95398 923 aa6.44□□□□□ -1.38
SMC4-218ENST00000486711 AMHP03971 560 aa6.44□□□□□ -1.38
SMC4-218ENST00000486711 ZNF888P0CJ79 500 aaPredicted RBP6.44□□□□□ -1.38
SMC4-218ENST00000486711 GJA4P35212 333 aa6.44□□□□□ -1.38
SMC4-218ENST00000486711 ACVRL1P37023 503 aa6.44□□□□□ -1.38
SMC4-218ENST00000486711 RAC3P60763 192 aa6.44□□□□□ -1.38
SMC4-218ENST00000486711 GABREP78334 506 aa6.44□□□□□ -1.38
SMC4-218ENST00000486711 TOP3AQ13472 1001 aaPredicted RBP6.44□□□□□ -1.38
SMC4-218ENST00000486711 ZMAT1Q5H9K5 638 aa6.44□□□□□ -1.38
SMC4-218ENST00000486711 FIGNQ5HY92 759 aa6.44□□□□□ -1.38
SMC4-218ENST00000486711 ARHGAP36Q6ZRI8 547 aa6.44□□□□□ -1.38
SMC4-218ENST00000486711 EP400NLQ6ZTU2 488 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms