RNA–Protein interactions for RNA: ENST00000486028.1

HMG20B-211, Transcript of high mobility group 20B, humanhuman

TSL 2

Gene HMG20B, Length 719 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-211ENST00000486028 CAND2O75155 1236 aa14.03□□□□□ -0.16
HMG20B-211ENST00000486028 FGBP02675 491 aa14.03□□□□□ -0.16
HMG20B-211ENST00000486028 ACRP10323 421 aa14.03□□□□□ -0.16
HMG20B-211ENST00000486028 ATP2B1P20020 1258 aa14.03□□□□□ -0.16
HMG20B-211ENST00000486028 THPOP40225 353 aa14.03□□□□□ -0.16
HMG20B-211ENST00000486028 IGBP1P78318 339 aa14.03□□□□□ -0.16
HMG20B-211ENST00000486028 CALCRLQ16602 461 aa14.03□□□□□ -0.16
HMG20B-211ENST00000486028 LRIT3Q3SXY7 679 aa14.03□□□□□ -0.16
HMG20B-211ENST00000486028 TMEM240Q5SV17 173 aa14.03□□□□□ -0.16
HMG20B-211ENST00000486028 TAF2Q6P1X5 1199 aa14.03□□□□□ -0.16
HMG20B-211ENST00000486028 ZNF365Q70YC5 407 aa14.03□□□□□ -0.16
HMG20B-211ENST00000486028 C16orf59Q7L2K0 433 aa14.03□□□□□ -0.16
HMG20B-211ENST00000486028 MIER3Q7Z3K6 550 aa14.03□□□□□ -0.16
HMG20B-211ENST00000486028 NOSTRINQ8IVI9 506 aa14.03□□□□□ -0.16
HMG20B-211ENST00000486028 HAS1Q92839 578 aa14.03□□□□□ -0.16
HMG20B-211ENST00000486028 RNPC3Q96LT9 517 aaKnown RBP14.03□□□□□ -0.16
HMG20B-211ENST00000486028 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.03□□□□□ -0.162e-8■■□□□ 12.4
HMG20B-211ENST00000486028 TUBE1Q9UJT0 475 aa14.03□□□□□ -0.16
HMG20B-211ENST00000486028 MBLAC1A4D2B0 266 aaPredicted RBP14.02□□□□□ -0.17
HMG20B-211ENST00000486028 NEMFO60524 1076 aa14.02□□□□□ -0.17
HMG20B-211ENST00000486028 ATP4AP20648 1035 aa14.02□□□□□ -0.17
HMG20B-211ENST00000486028 U2AF2P26368 475 aaKnown RBP eCLIP14.02□□□□□ -0.17
HMG20B-211ENST00000486028 PPP2R5CQ13362 524 aa14.02□□□□□ -0.17
HMG20B-211ENST00000486028 ZNF484Q5JVG2 852 aa14.02□□□□□ -0.17
HMG20B-211ENST00000486028 MARCH8Q5T0T0 291 aa14.02□□□□□ -0.17
HMG20B-211ENST00000486028 ZNF618Q5T7W0 954 aa14.02□□□□□ -0.17
HMG20B-211ENST00000486028 MCTP1Q6DN14 999 aa14.02□□□□□ -0.17
HMG20B-211ENST00000486028 B3GNT9Q6UX72 402 aa14.02□□□□□ -0.17
HMG20B-211ENST00000486028 DEFB128Q7Z7B8 93 aa14.02□□□□□ -0.17
HMG20B-211ENST00000486028 RSPH3Q86UC2 560 aa14.02□□□□□ -0.17
HMG20B-211ENST00000486028 POTEDQ86YR6 584 aa14.02□□□□□ -0.17
HMG20B-211ENST00000486028 WNT8BQ93098 351 aa14.02□□□□□ -0.17
HMG20B-211ENST00000486028 FAM167AQ96KS9 214 aa14.02□□□□□ -0.17
HMG20B-211ENST00000486028 FTOQ9C0B1 505 aaKnown RBP eCLIP14.02□□□□□ -0.17
HMG20B-211ENST00000486028 MTIF3Q9H2K0 278 aaKnown RBP14.02□□□□□ -0.17
HMG20B-211ENST00000486028 NRBP2Q9NSY0 501 aa14.02□□□□□ -0.17
HMG20B-211ENST00000486028 NOL7Q9UMY1 257 aaKnown RBP14.02□□□□□ -0.17
HMG20B-211ENST00000486028 KAT6AQ92794 2004 aa14.02□□□□□ -0.17
HMG20B-211ENST00000486028 RSPH10B2B2RC85 870 aa14.01□□□□□ -0.17
HMG20B-211ENST00000486028 RPLP2P05387 115 aaKnown RBP14.01□□□□□ -0.17
HMG20B-211ENST00000486028 RSPH10BP0C881 870 aa14.01□□□□□ -0.17
HMG20B-211ENST00000486028 ACTN1P12814 892 aa14.01□□□□□ -0.17
HMG20B-211ENST00000486028 MCM7P33993 719 aa14.01□□□□□ -0.17
HMG20B-211ENST00000486028 TRAPPC10P48553 1259 aa14.01□□□□□ -0.17
HMG20B-211ENST00000486028 ORC2Q13416 577 aaPredicted RBP14.01□□□□□ -0.17
HMG20B-211ENST00000486028 LARP1BQ659C4 914 aaKnown RBP14.01□□□□□ -0.17
HMG20B-211ENST00000486028 RPAINQ86UA6 219 aa14.01□□□□□ -0.17
HMG20B-211ENST00000486028 HERVK_113Q902F9 699 aa14.01□□□□□ -0.17
HMG20B-211ENST00000486028 SNX21Q969T3 373 aa14.01□□□□□ -0.17
HMG20B-211ENST00000486028 VAV3Q9UKW4 847 aa14.01□□□□□ -0.17
HMG20B-211ENST00000486028 PCDHA12Q9UN75 941 aa14.01□□□□□ -0.17
HMG20B-211ENST00000486028 PCDHA2Q9Y5H9 948 aa14.01□□□□□ -0.17
HMG20B-211ENST00000486028 TRIP12Q14669 1992 aaPredicted RBP14.01□□□□□ -0.17
HMG20B-211ENST00000486028 COL1A2P08123 1366 aa14□□□□□ -0.17
HMG20B-211ENST00000486028 IGSF9BQ9UPX0 1349 aa14□□□□□ -0.17
HMG20B-211ENST00000486028 K7ELQ4 463 aaPredicted RBP14□□□□□ -0.17
HMG20B-211ENST00000486028 KLRC1P26715 233 aa14□□□□□ -0.17
HMG20B-211ENST00000486028 FXR1P51114 621 aaKnown RBP eCLIP14□□□□□ -0.17
HMG20B-211ENST00000486028 ZNF174Q15697 407 aa14□□□□□ -0.17
HMG20B-211ENST00000486028 TTC38Q5R3I4 469 aa14□□□□□ -0.17
HMG20B-211ENST00000486028 TRAF7Q6Q0C0 670 aa14□□□□□ -0.17
HMG20B-211ENST00000486028 RUFY4Q6ZNE9 571 aa14□□□□□ -0.17
HMG20B-211ENST00000486028 OTOP2Q7RTS6 562 aa14□□□□□ -0.17
HMG20B-211ENST00000486028 TRMT1LQ7Z2T5 733 aaKnown RBP14□□□□□ -0.17
HMG20B-211ENST00000486028 TRAPPC12Q8WVT3 735 aa14□□□□□ -0.17
HMG20B-211ENST00000486028 INTS4Q96HW7 963 aaKnown RBP14□□□□□ -0.17
HMG20B-211ENST00000486028 MTMR9Q96QG7 549 aa14□□□□□ -0.17
HMG20B-211ENST00000486028 CEP131Q9UPN4 1083 aa14□□□□□ -0.17
HMG20B-211ENST00000486028 KIF28PB7ZC32 967 aa13.99□□□□□ -0.17
HMG20B-211ENST00000486028 EML1O00423 815 aa13.99□□□□□ -0.17
HMG20B-211ENST00000486028 WNT7AO00755 349 aa13.99□□□□□ -0.17
HMG20B-211ENST00000486028 ZNF862O60290 1169 aa13.99□□□□□ -0.17
HMG20B-211ENST00000486028 DKC1O60832 514 aaKnown RBP eCLIP13.99□□□□□ -0.17
HMG20B-211ENST00000486028 OATP04181 439 aa13.99□□□□□ -0.17
HMG20B-211ENST00000486028 PDCP20941 246 aa13.99□□□□□ -0.17
HMG20B-211ENST00000486028 TXKP42681 527 aa13.99□□□□□ -0.17
HMG20B-211ENST00000486028 QARSP47897 775 aaKnown RBP13.99□□□□□ -0.17
HMG20B-211ENST00000486028 PSMC5P62195 406 aa13.99□□□□□ -0.17
HMG20B-211ENST00000486028 PRKCEQ02156 737 aa13.99□□□□□ -0.17
HMG20B-211ENST00000486028 GPNMBQ14956 572 aa13.99□□□□□ -0.17
HMG20B-211ENST00000486028 EPHA7Q15375 998 aa13.99□□□□□ -0.17
HMG20B-211ENST00000486028 UGCGQ16739 394 aa13.99□□□□□ -0.17
HMG20B-211ENST00000486028 XKR3Q5GH77 459 aa13.99□□□□□ -0.17
HMG20B-211ENST00000486028 FAM26DQ5JW98 314 aa13.99□□□□□ -0.17
HMG20B-211ENST00000486028 NCAPH2Q6IBW4 605 aa13.99□□□□□ -0.17
HMG20B-211ENST00000486028 MTHFD1LQ6UB35 978 aa13.99□□□□□ -0.17
HMG20B-211ENST00000486028 DNAJB3Q8WWF6 145 aa13.99□□□□□ -0.17
HMG20B-211ENST00000486028 VWCEQ96DN2 955 aa13.99□□□□□ -0.17
HMG20B-211ENST00000486028 FAM49AQ9H0Q0 323 aaPredicted RBP13.99□□□□□ -0.17
HMG20B-211ENST00000486028 TTC12Q9H892 705 aaPredicted RBP13.99□□□□□ -0.17
HMG20B-211ENST00000486028 SMIM35A0A1B0GVV1 85 aa13.98□□□□□ -0.17
HMG20B-211ENST00000486028 DDX11L8A8MPP1 907 aa13.98□□□□□ -0.17
HMG20B-211ENST00000486028 ZBTB42B2RXF5 422 aa13.98□□□□□ -0.17
HMG20B-211ENST00000486028 MAGEB2O15479 319 aa13.98□□□□□ -0.17
HMG20B-211ENST00000486028 NBNO60934 754 aa13.98□□□□□ -0.17
HMG20B-211ENST00000486028 CXCL10P02778 98 aa13.98□□□□□ -0.17
HMG20B-211ENST00000486028 P4HBP07237 508 aaKnown RBP13.98□□□□□ -0.17
HMG20B-211ENST00000486028 CTSHP09668 335 aa13.98□□□□□ -0.17
HMG20B-211ENST00000486028 RASIP1Q5U651 963 aa13.98□□□□□ -0.17
HMG20B-211ENST00000486028 IER5Q5VY09 327 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms