RNA–Protein interactions for RNA: ENST00000485983.6

SRGAP3-207, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 1 (best)

Gene SRGAP3, Length 5,677 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-207ENST00000485983 AFG1LQ8WV93 481 aa11.36□□□□□ -0.59
SRGAP3-207ENST00000485983 MMP19Q99542 508 aa11.36□□□□□ -0.59
SRGAP3-207ENST00000485983 GOLGA8IPA6NC78 632 aa11.36□□□□□ -0.59
SRGAP3-207ENST00000485983 GOLGA8JA6NMD2 632 aa11.36□□□□□ -0.59
SRGAP3-207ENST00000485983 PER1O15534 1290 aaPredicted RBP11.36□□□□□ -0.59
SRGAP3-207ENST00000485983 TOGARAM2Q6ZUX3 1019 aa11.36□□□□□ -0.59
SRGAP3-207ENST00000485983 ZC3H15Q8WU90 426 aaKnown RBP11.36□□□□□ -0.59
SRGAP3-207ENST00000485983 EDEM3Q9BZQ6 932 aa11.36□□□□□ -0.59
SRGAP3-207ENST00000485983 TBC1D22BQ9NU19 505 aa11.36□□□□□ -0.59
SRGAP3-207ENST00000485983 PCDHA5Q9Y5H7 936 aa11.36□□□□□ -0.59
SRGAP3-207ENST00000485983 ABCC4O15439 1325 aa11.36□□□□□ -0.59
SRGAP3-207ENST00000485983 TNPO2O14787 897 aaKnown RBP11.36□□□□□ -0.59
SRGAP3-207ENST00000485983 PRPF3O43395 683 aaKnown RBP11.36□□□□□ -0.59
SRGAP3-207ENST00000485983 TOM1L1O75674 476 aa11.36□□□□□ -0.59
SRGAP3-207ENST00000485983 PSMA2P25787 234 aa11.36□□□□□ -0.59
SRGAP3-207ENST00000485983 ATP1A2P50993 1020 aa11.36□□□□□ -0.59
SRGAP3-207ENST00000485983 OCRLQ01968 901 aa11.36□□□□□ -0.59
SRGAP3-207ENST00000485983 SPATS2Q86XZ4 545 aaKnown RBP11.36□□□□□ -0.59
SRGAP3-207ENST00000485983 C2orf40Q9H1Z8 148 aa11.36□□□□□ -0.59
SRGAP3-207ENST00000485983 MTMR6Q9Y217 621 aa11.36□□□□□ -0.59
SRGAP3-207ENST00000485983 SHANK2Q9UPX8 1470 aa11.36□□□□□ -0.59
SRGAP3-207ENST00000485983 PGRMC1O00264 195 aaKnown RBP11.36□□□□□ -0.59
SRGAP3-207ENST00000485983 PRKAB2O43741 272 aa11.36□□□□□ -0.59
SRGAP3-207ENST00000485983 SNX2O60749 519 aa11.36□□□□□ -0.59
SRGAP3-207ENST00000485983 ZNF568Q3ZCX4 644 aa11.36□□□□□ -0.59
SRGAP3-207ENST00000485983 PDIK1LQ8N165 341 aa11.36□□□□□ -0.59
SRGAP3-207ENST00000485983 SCG3Q8WXD2 468 aaKnown RBP11.36□□□□□ -0.59
SRGAP3-207ENST00000485983 GCOM2Q9BZD3 368 aaPredicted RBP11.36□□□□□ -0.59
SRGAP3-207ENST00000485983 SUN2Q9UH99 717 aa11.36□□□□□ -0.59
SRGAP3-207ENST00000485983 ATG16L1Q676U5 607 aa11.35□□□□□ -0.59
SRGAP3-207ENST00000485983 PPP4R3CPQ6ZMV5 832 aa11.35□□□□□ -0.59
SRGAP3-207ENST00000485983 SYNE4Q8N205 404 aa11.35□□□□□ -0.59
SRGAP3-207ENST00000485983 SH3KBP1Q96B97 665 aa11.35□□□□□ -0.59
SRGAP3-207ENST00000485983 CFAP36Q96G28 342 aa11.35□□□□□ -0.59
SRGAP3-207ENST00000485983 FSD1LQ9BXM9 530 aa11.35□□□□□ -0.59
SRGAP3-207ENST00000485983 RAVER2Q9HCJ3 691 aaKnown RBP11.35□□□□□ -0.59
SRGAP3-207ENST00000485983 BBS9Q3SYG4 887 aa11.35□□□□□ -0.59
SRGAP3-207ENST00000485983 FAM83BQ5T0W9 1011 aa11.35□□□□□ -0.59
SRGAP3-207ENST00000485983 MAP4K1Q92918 833 aa11.35□□□□□ -0.59
SRGAP3-207ENST00000485983 OTUD5Q96G74 571 aa11.35□□□□□ -0.59
SRGAP3-207ENST00000485983 RNF123Q5XPI4 1314 aa11.35□□□□□ -0.59
SRGAP3-207ENST00000485983 SASH1O94885 1247 aa11.35□□□□□ -0.59
SRGAP3-207ENST00000485983 MOCS3O95396 460 aa11.35□□□□□ -0.59
SRGAP3-207ENST00000485983 CASP14P31944 242 aa11.35□□□□□ -0.59
SRGAP3-207ENST00000485983 KRT76Q01546 638 aa11.35□□□□□ -0.59
SRGAP3-207ENST00000485983 ART3Q13508 389 aa11.35□□□□□ -0.59
SRGAP3-207ENST00000485983 GLE1Q53GS7 698 aaKnown RBP11.35□□□□□ -0.59
SRGAP3-207ENST00000485983 FAM133AQ8N9E0 248 aa11.35□□□□□ -0.59
SRGAP3-207ENST00000485983 HSPH1Q92598 858 aa11.35□□□□□ -0.59
SRGAP3-207ENST00000485983 EXT2Q93063 718 aa11.35□□□□□ -0.59
SRGAP3-207ENST00000485983 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.35□□□□□ -0.59
SRGAP3-207ENST00000485983 TEX12Q9BXU0 123 aa11.35□□□□□ -0.59
SRGAP3-207ENST00000485983 TDRD3Q9H7E2 651 aaKnown RBP11.35□□□□□ -0.59
SRGAP3-207ENST00000485983 SPON1Q9HCB6 807 aa11.35□□□□□ -0.59
SRGAP3-207ENST00000485983 MAP3K20Q9NYL2 800 aaKnown RBP11.35□□□□□ -0.59
SRGAP3-207ENST00000485983 KLHL8Q9P2G9 620 aaPredicted RBP11.35□□□□□ -0.59
SRGAP3-207ENST00000485983 ECE2O60344 883 aa11.35□□□□□ -0.59
SRGAP3-207ENST00000485983 CPB1P15086 417 aa11.35□□□□□ -0.59
SRGAP3-207ENST00000485983 PLTPP55058 493 aa11.35□□□□□ -0.59
SRGAP3-207ENST00000485983 GPSM2P81274 684 aa11.35□□□□□ -0.59
SRGAP3-207ENST00000485983 MXD4Q14582 209 aaPredicted RBP11.35□□□□□ -0.59
SRGAP3-207ENST00000485983 PPP6R3Q5H9R7 873 aaPredicted RBP11.35□□□□□ -0.59
SRGAP3-207ENST00000485983 BHMT2Q9H2M3 363 aa11.35□□□□□ -0.59
SRGAP3-207ENST00000485983 TEKT2Q9UIF3 430 aa11.35□□□□□ -0.59
SRGAP3-207ENST00000485983 ARHGEF12Q9NZN5 1544 aa11.35□□□□□ -0.59
SRGAP3-207ENST00000485983 TMED2Q15363 201 aa11.35□□□□□ -0.59
SRGAP3-207ENST00000485983 SLC27A3Q5K4L6 730 aa11.35□□□□□ -0.59
SRGAP3-207ENST00000485983 TMEM35BQ8NCS4 154 aa11.35□□□□□ -0.59
SRGAP3-207ENST00000485983 STAG1Q8WVM7 1258 aa11.35□□□□□ -0.59
SRGAP3-207ENST00000485983 RNF146Q9NTX7 359 aa11.35□□□□□ -0.59
SRGAP3-207ENST00000485983 LMBRD1Q9NUN5 540 aa11.35□□□□□ -0.59
SRGAP3-207ENST00000485983 STAP1Q9ULZ2 295 aa11.35□□□□□ -0.59
SRGAP3-207ENST00000485983 SUFUQ9UMX1 484 aa11.35□□□□□ -0.59
SRGAP3-207ENST00000485983 ZNF335Q9H4Z2 1342 aaPredicted RBP11.35□□□□□ -0.59
SRGAP3-207ENST00000485983 MAGI3Q5TCQ9 1506 aa11.35□□□□□ -0.59
SRGAP3-207ENST00000485983 SLFN14P0C7P3 912 aa11.34□□□□□ -0.59
SRGAP3-207ENST00000485983 ADRA2BP18089 450 aa11.34□□□□□ -0.59
SRGAP3-207ENST00000485983 PZPP20742 1482 aa11.34□□□□□ -0.59
SRGAP3-207ENST00000485983 MYOM2P54296 1465 aa11.34□□□□□ -0.59
SRGAP3-207ENST00000485983 SESN3P58005 492 aa11.34□□□□□ -0.59
SRGAP3-207ENST00000485983 SNAP25P60880 206 aa11.34□□□□□ -0.59
SRGAP3-207ENST00000485983 ATP7AQ04656 1500 aa11.34□□□□□ -0.59
SRGAP3-207ENST00000485983 PROSER3Q2NL68 480 aa11.34□□□□□ -0.59
SRGAP3-207ENST00000485983 TMED8Q6PL24 325 aaPredicted RBP11.34□□□□□ -0.59
SRGAP3-207ENST00000485983 PIGBQ92521 554 aa11.34□□□□□ -0.59
SRGAP3-207ENST00000485983 CAPS2Q9BXY5 557 aa11.34□□□□□ -0.59
SRGAP3-207ENST00000485983 KLC2Q9H0B6 622 aa11.34□□□□□ -0.59
SRGAP3-207ENST00000485983 ZWILCHQ9H900 591 aa11.34□□□□□ -0.59
SRGAP3-207ENST00000485983 AFF2P51816 1311 aa11.34□□□□□ -0.59
SRGAP3-207ENST00000485983 ASB14A6NK59 587 aa11.34□□□□□ -0.59
SRGAP3-207ENST00000485983 NSUN2Q08J23 767 aaKnown RBP eCLIP11.34□□□□□ -0.59
SRGAP3-207ENST00000485983 TFDP2Q14188 446 aa11.34□□□□□ -0.59
SRGAP3-207ENST00000485983 DGKHQ86XP1 1220 aa11.34□□□□□ -0.59
SRGAP3-207ENST00000485983 CXorf38Q8TB03 319 aa11.34□□□□□ -0.59
SRGAP3-207ENST00000485983 ULK4Q96C45 1275 aa11.34□□□□□ -0.59
SRGAP3-207ENST00000485983 PBKQ96KB5 322 aa11.34□□□□□ -0.59
SRGAP3-207ENST00000485983 PPP1R9AQ9ULJ8 1098 aa11.34□□□□□ -0.59
SRGAP3-207ENST00000485983 RPAP1Q9BWH6 1393 aaPredicted RBP11.34□□□□□ -0.59
SRGAP3-207ENST00000485983 IPO5O00410 1097 aaKnown RBP11.34□□□□□ -0.59
SRGAP3-207ENST00000485983 APOEP02649 317 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms