RNA–Protein interactions for RNA: ENST00000485870.1

COL1A1-206, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 403 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-206ENST00000485870 MBOAT7Q96N66 472 aa20.82■□□□□ 0.92
COL1A1-206ENST00000485870 CDX2Q99626 313 aaPredicted RBP20.82■□□□□ 0.92
COL1A1-206ENST00000485870 OSBPL7Q9BZF2 842 aa20.82■□□□□ 0.92
COL1A1-206ENST00000485870 FAM49AQ9H0Q0 323 aaPredicted RBP20.82■□□□□ 0.92
COL1A1-206ENST00000485870 UNC45AQ9H3U1 944 aa20.82■□□□□ 0.92
COL1A1-206ENST00000485870 ZNF576Q9H609 170 aa20.82■□□□□ 0.92
COL1A1-206ENST00000485870 GABBR1Q9UBS5 961 aa20.82■□□□□ 0.92
COL1A1-206ENST00000485870 FAM205CA6NFA0 338 aa20.81■□□□□ 0.92
COL1A1-206ENST00000485870 SLC37A4O43826 429 aa20.81■□□□□ 0.92
COL1A1-206ENST00000485870 HBP1O60381 514 aa20.81■□□□□ 0.92
COL1A1-206ENST00000485870 ATP4AP20648 1035 aa20.81■□□□□ 0.92
COL1A1-206ENST00000485870 TRIM29Q14134 588 aa20.81■□□□□ 0.92
COL1A1-206ENST00000485870 IKBKEQ14164 716 aa20.81■□□□□ 0.92
COL1A1-206ENST00000485870 EARS2Q5JPH6 523 aaKnown RBP20.81■□□□□ 0.92
COL1A1-206ENST00000485870 FAM26DQ5JW98 314 aa20.81■□□□□ 0.92
COL1A1-206ENST00000485870 DBF4BQ8NFT6 615 aa20.81■□□□□ 0.92
COL1A1-206ENST00000485870 DISC1Q9NRI5 854 aa20.81■□□□□ 0.92
COL1A1-206ENST00000485870 STXBP5LQ9Y2K9 1186 aa20.81■□□□□ 0.92
COL1A1-206ENST00000485870 PCDHA11Q9Y5I1 949 aa20.81■□□□□ 0.92
COL1A1-206ENST00000485870 PTPRSQ13332 1948 aa20.8■□□□□ 0.92
COL1A1-206ENST00000485870 WDR81Q562E7 1941 aa20.8■□□□□ 0.92
COL1A1-206ENST00000485870 ABHD14A-ACY1A0A1B0GW23 586 aa20.8■□□□□ 0.92
COL1A1-206ENST00000485870 PSMD10O75832 226 aa20.8■□□□□ 0.92
COL1A1-206ENST00000485870 CHRNA1P02708 482 aa20.8■□□□□ 0.92
COL1A1-206ENST00000485870 MMP1P03956 469 aa20.8■□□□□ 0.92
COL1A1-206ENST00000485870 DEFB103AP81534 67 aa20.8■□□□□ 0.92
COL1A1-206ENST00000485870 GRIN2CQ14957 1233 aa20.8■□□□□ 0.92
COL1A1-206ENST00000485870 RABEP1Q15276 862 aa20.8■□□□□ 0.92
COL1A1-206ENST00000485870 PLEKHG4Q58EX7 1191 aa20.8■□□□□ 0.92
COL1A1-206ENST00000485870 KRT40Q6A162 431 aa20.8■□□□□ 0.92
COL1A1-206ENST00000485870 TMCO2Q7Z6W1 182 aaPredicted RBP20.8■□□□□ 0.92
COL1A1-206ENST00000485870 RPAINQ86UA6 219 aa20.8■□□□□ 0.92
COL1A1-206ENST00000485870 HERC6Q8IVU3 1022 aa20.8■□□□□ 0.92
COL1A1-206ENST00000485870 ETNPPLQ8TBG4 499 aa20.8■□□□□ 0.92
COL1A1-206ENST00000485870 PHOSPHO2Q8TCD6 241 aa20.8■□□□□ 0.92
COL1A1-206ENST00000485870 MYLIPQ8WY64 445 aa20.8■□□□□ 0.92
COL1A1-206ENST00000485870 SLC28A3Q9HAS3 691 aa20.8■□□□□ 0.92
COL1A1-206ENST00000485870 SH2B1Q9NRF2 756 aaPredicted RBP20.8■□□□□ 0.92
COL1A1-206ENST00000485870 MAFBQ9Y5Q3 323 aaPredicted RBP20.8■□□□□ 0.92
COL1A1-206ENST00000485870 SIP14410 1827 aa20.79■□□□□ 0.92
COL1A1-206ENST00000485870 MICAL3Q7RTP6 2002 aa20.79■□□□□ 0.92
COL1A1-206ENST00000485870 CCNT1O60563 726 aaKnown RBP20.79■□□□□ 0.92
COL1A1-206ENST00000485870 GHRP10912 638 aa20.79■□□□□ 0.92
COL1A1-206ENST00000485870 JAK3P52333 1124 aa20.79■□□□□ 0.92
COL1A1-206ENST00000485870 MGAT3Q09327 533 aa20.79■□□□□ 0.92
COL1A1-206ENST00000485870 MTHFD1LQ6UB35 978 aa20.79■□□□□ 0.92
COL1A1-206ENST00000485870 SEPT8Q92599 483 aa20.79■□□□□ 0.92
COL1A1-206ENST00000485870 TNFRSF25Q93038 417 aa20.79■□□□□ 0.92
COL1A1-206ENST00000485870 PCDHA2Q9Y5H9 948 aa20.79■□□□□ 0.92
COL1A1-206ENST00000485870 CDY2AQ9Y6F7 541 aa20.79■□□□□ 0.92
COL1A1-206ENST00000485870 IGSF9BQ9UPX0 1349 aa20.78■□□□□ 0.92
COL1A1-206ENST00000485870 CHD9Q3L8U1 2897 aa20.78■□□□□ 0.92
COL1A1-206ENST00000485870 COL1A2P08123 1366 aa20.78■□□□□ 0.92
COL1A1-206ENST00000485870 BTBD18B2RXH4 712 aa20.78■□□□□ 0.92
COL1A1-206ENST00000485870 EFCAB14O75071 495 aa20.78■□□□□ 0.92
COL1A1-206ENST00000485870 GCFC2P16383 781 aaKnown RBP20.78■□□□□ 0.92
COL1A1-206ENST00000485870 KLRC1P26715 233 aa20.78■□□□□ 0.92
COL1A1-206ENST00000485870 SFNP31947 248 aa20.78■□□□□ 0.92
COL1A1-206ENST00000485870 MRPS6P82932 125 aaKnown RBP20.78■□□□□ 0.92
COL1A1-206ENST00000485870 GUCY1B3Q02153 619 aa20.78■□□□□ 0.92
COL1A1-206ENST00000485870 TMEM62Q0P6H9 643 aa20.78■□□□□ 0.92
COL1A1-206ENST00000485870 UGCGQ16739 394 aa20.78■□□□□ 0.92
COL1A1-206ENST00000485870 ZNF484Q5JVG2 852 aa20.78■□□□□ 0.92
COL1A1-206ENST00000485870 PPP2R2DQ66LE6 453 aa20.78■□□□□ 0.92
COL1A1-206ENST00000485870 PPP4R3AQ6IN85 833 aa20.78■□□□□ 0.92
COL1A1-206ENST00000485870 MIER3Q7Z3K6 550 aa20.78■□□□□ 0.92
COL1A1-206ENST00000485870 DIS3L2Q8IYB7 885 aaKnown RBP20.78■□□□□ 0.92
COL1A1-206ENST00000485870 BBXQ8WY36 941 aaPredicted RBP20.78■□□□□ 0.92
COL1A1-206ENST00000485870 LLPHQ9BRT6 129 aaKnown RBP20.78■□□□□ 0.92
COL1A1-206ENST00000485870 EVPLQ92817 2033 aa20.77■□□□□ 0.92
COL1A1-206ENST00000485870 ZBTB42B2RXF5 422 aa20.77■□□□□ 0.92
COL1A1-206ENST00000485870 CA3P07451 260 aa20.77■□□□□ 0.92
COL1A1-206ENST00000485870 LIN28BQ6ZN17 250 aaKnown RBP eCLIP20.77■□□□□ 0.92
COL1A1-206ENST00000485870 NAP1L4Q99733 375 aaKnown RBP20.77■□□□□ 0.92
COL1A1-206ENST00000485870 IFIH1Q9BYX4 1025 aaKnown RBP20.77■□□□□ 0.92
COL1A1-206ENST00000485870 SMIM35A0A1B0GVV1 85 aa20.76■□□□□ 0.91
COL1A1-206ENST00000485870 KIF28PB7ZC32 967 aa20.76■□□□□ 0.91
COL1A1-206ENST00000485870 M0QZ92 97 aa20.76■□□□□ 0.91
COL1A1-206ENST00000485870 TLL1O43897 1013 aa20.76■□□□□ 0.91
COL1A1-206ENST00000485870 ST18O60284 1047 aa20.76■□□□□ 0.91
COL1A1-206ENST00000485870 ZNF862O60290 1169 aa20.76■□□□□ 0.91
COL1A1-206ENST00000485870 RPLP2P05387 115 aaKnown RBP20.76■□□□□ 0.91
COL1A1-206ENST00000485870 FOSL2P15408 326 aa20.76■□□□□ 0.91
COL1A1-206ENST00000485870 PRKCEQ02156 737 aa20.76■□□□□ 0.91
COL1A1-206ENST00000485870 LPIN1Q14693 890 aa20.76■□□□□ 0.91
COL1A1-206ENST00000485870 FAM117BQ6P1L5 589 aa20.76■□□□□ 0.91
COL1A1-206ENST00000485870 POTEDQ86YR6 584 aa20.76■□□□□ 0.91
COL1A1-206ENST00000485870 RDM1Q8NG50 284 aa20.76■□□□□ 0.91
COL1A1-206ENST00000485870 C8orf76Q96K31 380 aa20.76■□□□□ 0.91
COL1A1-206ENST00000485870 FAM167AQ96KS9 214 aa20.76■□□□□ 0.91
COL1A1-206ENST00000485870 ZBED2Q9BTP6 218 aa20.76■□□□□ 0.91
COL1A1-206ENST00000485870 PRDM12Q9H4Q4 367 aa20.76■□□□□ 0.91
COL1A1-206ENST00000485870 KCNMB3Q9NPA1 279 aa20.76■□□□□ 0.91
COL1A1-206ENST00000485870 MARCH6O60337 910 aa20.75■□□□□ 0.91
COL1A1-206ENST00000485870 OATP04181 439 aa20.75■□□□□ 0.91
COL1A1-206ENST00000485870 FBXO47Q5MNV8 452 aa20.75■□□□□ 0.91
COL1A1-206ENST00000485870 IER5Q5VY09 327 aa20.75■□□□□ 0.91
COL1A1-206ENST00000485870 B3GNT9Q6UX72 402 aa20.75■□□□□ 0.91
COL1A1-206ENST00000485870 MYOCDQ8IZQ8 938 aa20.75■□□□□ 0.91
COL1A1-206ENST00000485870 FAM184AQ8NB25 1140 aa20.75■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms