RNA–Protein interactions for RNA: ENST00000485592.5

SMARCD3-211, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 3

Gene SMARCD3, Length 820 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-211ENST00000485592 RNF135Q8IUD6 432 aa15.71■□□□□ 0.11
SMARCD3-211ENST00000485592 CCDC82Q8N4S0 544 aa15.71■□□□□ 0.11
SMARCD3-211ENST00000485592 ZBTB10Q96DT7 871 aa15.71■□□□□ 0.11
SMARCD3-211ENST00000485592 FBXL18Q96ME1 805 aa15.71■□□□□ 0.11
SMARCD3-211ENST00000485592 PCYT2Q99447 389 aa15.71■□□□□ 0.11
SMARCD3-211ENST00000485592 PADI3Q9ULW8 664 aa15.71■□□□□ 0.11
SMARCD3-211ENST00000485592 PCDHA2Q9Y5H9 948 aa15.71■□□□□ 0.11
SMARCD3-211ENST00000485592 SLC12A7Q9Y666 1083 aa15.71■□□□□ 0.11
SMARCD3-211ENST00000485592 hCG_1642624A0A1W2PR95 340 aa15.7■□□□□ 0.1
SMARCD3-211ENST00000485592 CAMK1Q14012 370 aa15.7■□□□□ 0.1
SMARCD3-211ENST00000485592 PLCB4Q15147 1175 aa15.7■□□□□ 0.1
SMARCD3-211ENST00000485592 TMTC3Q6ZXV5 915 aa15.7■□□□□ 0.1
SMARCD3-211ENST00000485592 PLPPR4Q7Z2D5 763 aa15.7■□□□□ 0.1
SMARCD3-211ENST00000485592 NME8Q8N427 588 aa15.7■□□□□ 0.1
SMARCD3-211ENST00000485592 KLHL23Q8NBE8 558 aa15.7■□□□□ 0.1
SMARCD3-211ENST00000485592 SPPL3Q8TCT6 385 aa15.7■□□□□ 0.1
SMARCD3-211ENST00000485592 POF1BQ8WVV4 589 aa15.7■□□□□ 0.1
SMARCD3-211ENST00000485592 MXRA8Q9BRK3 442 aa15.7■□□□□ 0.1
SMARCD3-211ENST00000485592 CELF4Q9BZC1 486 aaKnown RBP15.7■□□□□ 0.1
SMARCD3-211ENST00000485592 KCNH7Q9NS40 1196 aa15.7■□□□□ 0.1
SMARCD3-211ENST00000485592 RNF216Q9NWF9 866 aaPredicted RBP15.7■□□□□ 0.1
SMARCD3-211ENST00000485592 MUC6Q6W4X9 2439 aa15.7■□□□□ 0.1
SMARCD3-211ENST00000485592 NFASCO94856 1347 aa15.69■□□□□ 0.1
SMARCD3-211ENST00000485592 KDM3AQ9Y4C1 1321 aa15.69■□□□□ 0.1
SMARCD3-211ENST00000485592 PLXNA4Q9HCM2 1894 aa15.69■□□□□ 0.1
SMARCD3-211ENST00000485592 SMIM35A0A1B0GVV1 85 aa15.69■□□□□ 0.1
SMARCD3-211ENST00000485592 EYA4O95677 639 aa15.69■□□□□ 0.1
SMARCD3-211ENST00000485592 IBSPP21815 317 aaPredicted RBP15.69■□□□□ 0.1
SMARCD3-211ENST00000485592 SLC26A2P50443 739 aa15.69■□□□□ 0.1
SMARCD3-211ENST00000485592 STAT5BP51692 787 aa15.69■□□□□ 0.1
SMARCD3-211ENST00000485592 ACTR2P61160 394 aa15.69■□□□□ 0.1
SMARCD3-211ENST00000485592 KRT76Q01546 638 aa15.69■□□□□ 0.1
SMARCD3-211ENST00000485592 SPOUT1Q5T280 376 aaKnown RBP15.69■□□□□ 0.1
SMARCD3-211ENST00000485592 SYNE3Q6ZMZ3 975 aa15.69■□□□□ 0.1
SMARCD3-211ENST00000485592 FAM43BQ6ZT52 329 aaPredicted RBP15.69■□□□□ 0.1
SMARCD3-211ENST00000485592 ADGRD2Q7Z7M1 963 aa15.69■□□□□ 0.1
SMARCD3-211ENST00000485592 RTN4RL1Q86UN2 441 aaPredicted RBP15.69■□□□□ 0.1
SMARCD3-211ENST00000485592 MICU3Q86XE3 530 aa15.69■□□□□ 0.1
SMARCD3-211ENST00000485592 RAB11FIP4Q86YS3 637 aa15.69■□□□□ 0.1
SMARCD3-211ENST00000485592 CRIPAKQ8N1N5 446 aa15.69■□□□□ 0.1
SMARCD3-211ENST00000485592 EFHBQ8N7U6 833 aa15.69■□□□□ 0.1
SMARCD3-211ENST00000485592 FANCBQ8NB91 859 aa15.69■□□□□ 0.1
SMARCD3-211ENST00000485592 TRAPPC12Q8WVT3 735 aa15.69■□□□□ 0.1
SMARCD3-211ENST00000485592 MSLNLQ96KJ4 702 aa15.69■□□□□ 0.1
SMARCD3-211ENST00000485592 DNAJB1P25685 340 aa15.68■□□□□ 0.1
SMARCD3-211ENST00000485592 NRIP1P48552 1158 aa15.68■□□□□ 0.1
SMARCD3-211ENST00000485592 SARSP49591 514 aaKnown RBP15.68■□□□□ 0.1
SMARCD3-211ENST00000485592 NAPAP54920 295 aa15.68■□□□□ 0.1
SMARCD3-211ENST00000485592 NFX1Q12986 1120 aaKnown RBP15.68■□□□□ 0.1
SMARCD3-211ENST00000485592 ODR4Q5SWX8 454 aa15.68■□□□□ 0.1
SMARCD3-211ENST00000485592 MTHFD1LQ6UB35 978 aa15.68■□□□□ 0.1
SMARCD3-211ENST00000485592 TEX2Q8IWB9 1127 aa15.68■□□□□ 0.1
SMARCD3-211ENST00000485592 SMRP1Q8NCR6 262 aa15.68■□□□□ 0.1
SMARCD3-211ENST00000485592 EDAQ92838 391 aa15.68■□□□□ 0.1
SMARCD3-211ENST00000485592 AAASQ9NRG9 546 aa15.68■□□□□ 0.1
SMARCD3-211ENST00000485592 PCDHB7Q9Y5E2 793 aa15.68■□□□□ 0.1
SMARCD3-211ENST00000485592 PCDHB12Q9Y5F1 795 aa15.68■□□□□ 0.1
SMARCD3-211ENST00000485592 FNDC1Q4ZHG4 1894 aaPredicted RBP15.67■□□□□ 0.1
SMARCD3-211ENST00000485592 FSD2A1L4K1 749 aa15.67■□□□□ 0.1
SMARCD3-211ENST00000485592 DENND3A2RUS2 1198 aa15.67■□□□□ 0.1
SMARCD3-211ENST00000485592 SLC27A2O14975 620 aa15.67■□□□□ 0.1
SMARCD3-211ENST00000485592 FOSP01100 380 aaPredicted RBP15.67■□□□□ 0.1
SMARCD3-211ENST00000485592 UBE3AQ05086 875 aa15.67■□□□□ 0.1
SMARCD3-211ENST00000485592 COASYQ13057 564 aa15.67■□□□□ 0.1
SMARCD3-211ENST00000485592 CEP55Q53EZ4 464 aa15.67■□□□□ 0.1
SMARCD3-211ENST00000485592 WWC2Q6AWC2 1192 aa15.67■□□□□ 0.1
SMARCD3-211ENST00000485592 PPP1R18Q6NYC8 613 aa15.67■□□□□ 0.1
SMARCD3-211ENST00000485592 RBM23Q86U06 439 aaKnown RBP15.67■□□□□ 0.1
SMARCD3-211ENST00000485592 MICAL1Q8TDZ2 1067 aa15.67■□□□□ 0.1
SMARCD3-211ENST00000485592 ANO3Q9BYT9 981 aa15.67■□□□□ 0.1
SMARCD3-211ENST00000485592 TMX1Q9H3N1 280 aa15.67■□□□□ 0.1
SMARCD3-211ENST00000485592 C1orf112Q9NSG2 853 aa15.67■□□□□ 0.1
SMARCD3-211ENST00000485592 RBM28Q9NW13 759 aaKnown RBP15.67■□□□□ 0.1
SMARCD3-211ENST00000485592 CLEC1BQ9P126 229 aa15.67■□□□□ 0.1
SMARCD3-211ENST00000485592 BARX2Q9UMQ3 279 aaPredicted RBP15.67■□□□□ 0.1
SMARCD3-211ENST00000485592 GINS2Q9Y248 185 aa15.67■□□□□ 0.1
SMARCD3-211ENST00000485592 BACH1O14867 736 aa15.66■□□□□ 0.1
SMARCD3-211ENST00000485592 HBP1O60381 514 aa15.66■□□□□ 0.1
SMARCD3-211ENST00000485592 PPFIA3O75145 1194 aa15.66■□□□□ 0.1
SMARCD3-211ENST00000485592 RPS6KA5O75582 802 aa15.66■□□□□ 0.1
SMARCD3-211ENST00000485592 ARP10275 920 aa15.66■□□□□ 0.1
SMARCD3-211ENST00000485592 GATMP50440 423 aa15.66■□□□□ 0.1
SMARCD3-211ENST00000485592 TMEM266Q2M3C6 531 aa15.66■□□□□ 0.1
SMARCD3-211ENST00000485592 FAM160B1Q5W0V3 765 aa15.66■□□□□ 0.1
SMARCD3-211ENST00000485592 SGMS1Q86VZ5 419 aa15.66■□□□□ 0.1
SMARCD3-211ENST00000485592 CYP2W1Q8TAV3 490 aa15.66■□□□□ 0.1
SMARCD3-211ENST00000485592 PGBD1Q96JS3 809 aa15.66■□□□□ 0.1
SMARCD3-211ENST00000485592 LRRC2Q9BYS8 371 aa15.66■□□□□ 0.1
SMARCD3-211ENST00000485592 LSG1Q9H089 658 aaKnown RBP15.66■□□□□ 0.1
SMARCD3-211ENST00000485592 TLE6Q9H808 572 aa15.66■□□□□ 0.1
SMARCD3-211ENST00000485592 AGO4Q9HCK5 861 aaKnown RBP15.66■□□□□ 0.1
SMARCD3-211ENST00000485592 RIC8AQ9NPQ8 531 aa15.66■□□□□ 0.1
SMARCD3-211ENST00000485592 TLR9Q9NR96 1032 aa15.66■□□□□ 0.1
SMARCD3-211ENST00000485592 CNTNAP5Q8WYK1 1306 aa15.66■□□□□ 0.1
SMARCD3-211ENST00000485592 COL1A2P08123 1366 aa15.65■□□□□ 0.1
SMARCD3-211ENST00000485592 TBKBP1A7MCY6 615 aa15.65■□□□□ 0.1
SMARCD3-211ENST00000485592 hCG_1984214I3L0E3 225 aa15.65■□□□□ 0.1
SMARCD3-211ENST00000485592 ATG7O95352 703 aa15.65■□□□□ 0.1
SMARCD3-211ENST00000485592 GLP2RO95838 553 aa15.65■□□□□ 0.1
SMARCD3-211ENST00000485592 KLRC1P26715 233 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms