RNA–Protein interactions for RNA: ENST00000485591.1

COL6A2-208, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 3

Gene COL6A2, Length 777 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-208ENST00000485591 TUFT1Q9NNX1 390 aa22.34■■□□□ 1.17
COL6A2-208ENST00000485591 TRPC6Q9Y210 931 aa22.34■■□□□ 1.17
COL6A2-208ENST00000485591 SRPRBQ9Y5M8 271 aaKnown RBP22.34■■□□□ 1.17
COL6A2-208ENST00000485591 HBP1O60381 514 aa22.33■■□□□ 1.17
COL6A2-208ENST00000485591 OATP04181 439 aa22.33■■□□□ 1.17
COL6A2-208ENST00000485591 GRIN1Q05586 938 aa22.33■■□□□ 1.17
COL6A2-208ENST00000485591 FAM126BQ8IXS8 530 aa22.33■■□□□ 1.17
COL6A2-208ENST00000485591 C4orf19Q8IY42 314 aa22.33■■□□□ 1.17
COL6A2-208ENST00000485591 KCNG4Q8TDN1 519 aa22.33■■□□□ 1.17
COL6A2-208ENST00000485591 TOX2Q96NM4 488 aa22.33■■□□□ 1.17
COL6A2-208ENST00000485591 ZSWIM4Q9H7M6 989 aa22.33■■□□□ 1.17
COL6A2-208ENST00000485591 WRAP73Q9P2S5 460 aaPredicted RBP22.33■■□□□ 1.17
COL6A2-208ENST00000485591 COL1A2P08123 1366 aa22.33■■□□□ 1.17
COL6A2-208ENST00000485591 NRCAMQ92823 1304 aa22.32■■□□□ 1.16
COL6A2-208ENST00000485591 PP2D1A8MPX8 630 aa22.32■■□□□ 1.16
COL6A2-208ENST00000485591 MED24O75448 989 aa22.32■■□□□ 1.16
COL6A2-208ENST00000485591 STBD1O95210 358 aa22.32■■□□□ 1.16
COL6A2-208ENST00000485591 LYPLA2O95372 231 aa22.32■■□□□ 1.16
COL6A2-208ENST00000485591 SPATA31C1P0DKV0 1188 aa22.32■■□□□ 1.16
COL6A2-208ENST00000485591 RPA1P27694 616 aa22.32■■□□□ 1.16
COL6A2-208ENST00000485591 PPFIA1Q13136 1202 aa22.32■■□□□ 1.16
COL6A2-208ENST00000485591 CTTNQ14247 550 aaKnown RBP22.32■■□□□ 1.16
COL6A2-208ENST00000485591 XKR3Q5GH77 459 aa22.32■■□□□ 1.16
COL6A2-208ENST00000485591 CATSPER3Q86XQ3 398 aa22.32■■□□□ 1.16
COL6A2-208ENST00000485591 TPH2Q8IWU9 490 aa22.32■■□□□ 1.16
COL6A2-208ENST00000485591 KRI1Q8N9T8 703 aaKnown RBP22.32■■□□□ 1.16
COL6A2-208ENST00000485591 SNX29Q8TEQ0 813 aa22.32■■□□□ 1.16
COL6A2-208ENST00000485591 CHAMP1Q96JM3 812 aa22.32■■□□□ 1.16
COL6A2-208ENST00000485591 RCOR1Q9UKL0 485 aa22.32■■□□□ 1.16
COL6A2-208ENST00000485591 ATP11BQ9Y2G3 1177 aa22.32■■□□□ 1.16
COL6A2-208ENST00000485591 C17orf102A2RUQ5 167 aa22.31■■□□□ 1.16
COL6A2-208ENST00000485591 PQBP1O60828 265 aaKnown RBP22.31■■□□□ 1.16
COL6A2-208ENST00000485591 CD4P01730 458 aa22.31■■□□□ 1.16
COL6A2-208ENST00000485591 INSRRP14616 1297 aa22.31■■□□□ 1.16
COL6A2-208ENST00000485591 NCLP19338 710 aaKnown RBP22.31■■□□□ 1.16
COL6A2-208ENST00000485591 MUTP22033 750 aa22.31■■□□□ 1.16
COL6A2-208ENST00000485591 GRIK4Q16099 956 aa22.31■■□□□ 1.16
COL6A2-208ENST00000485591 KRT79Q5XKE5 535 aa22.31■■□□□ 1.16
COL6A2-208ENST00000485591 GDF6Q6KF10 455 aaPredicted RBP22.31■■□□□ 1.16
COL6A2-208ENST00000485591 LMBR1Q8WVP7 490 aa22.31■■□□□ 1.16
COL6A2-208ENST00000485591 NRBP2Q9NSY0 501 aa22.31■■□□□ 1.16
COL6A2-208ENST00000485591 RRN3P2A6NIE6 340 aa22.3■■□□□ 1.16
COL6A2-208ENST00000485591 DCDC2CA8MYV0 355 aa22.3■■□□□ 1.16
COL6A2-208ENST00000485591 TLR3O15455 904 aaKnown RBP22.3■■□□□ 1.16
COL6A2-208ENST00000485591 B4GALT4O60513 344 aa22.3■■□□□ 1.16
COL6A2-208ENST00000485591 GNAT1P11488 350 aa22.3■■□□□ 1.16
COL6A2-208ENST00000485591 CCT6AP40227 531 aaKnown RBP22.3■■□□□ 1.16
COL6A2-208ENST00000485591 ADAM17P78536 824 aa22.3■■□□□ 1.16
COL6A2-208ENST00000485591 TLE2Q04725 743 aa22.3■■□□□ 1.16
COL6A2-208ENST00000485591 HIC1Q14526 733 aa22.3■■□□□ 1.16
COL6A2-208ENST00000485591 ZNF484Q5JVG2 852 aa22.3■■□□□ 1.16
COL6A2-208ENST00000485591 MMTAG2Q9BU76 263 aaKnown RBP22.3■■□□□ 1.16
COL6A2-208ENST00000485591 NIFKQ9BYG3 293 aaKnown RBP22.3■■□□□ 1.16
COL6A2-208ENST00000485591 SCAND2PQ9GZW5 306 aaPredicted RBP22.3■■□□□ 1.16
COL6A2-208ENST00000485591 CSRNP2Q9H175 543 aa22.3■■□□□ 1.16
COL6A2-208ENST00000485591 SETD4Q9NVD3 440 aa22.3■■□□□ 1.16
COL6A2-208ENST00000485591 SEPT9Q9UHD8 586 aaPredicted RBP22.3■■□□□ 1.16
COL6A2-208ENST00000485591 KDM3AQ9Y4C1 1321 aa22.3■■□□□ 1.16
COL6A2-208ENST00000485591 ZBTB42B2RXF5 422 aa22.29■■□□□ 1.16
COL6A2-208ENST00000485591 SLC26A4O43511 780 aa22.29■■□□□ 1.16
COL6A2-208ENST00000485591 CDC25AP30304 524 aa22.29■■□□□ 1.16
COL6A2-208ENST00000485591 PTGISQ16647 500 aa22.29■■□□□ 1.16
COL6A2-208ENST00000485591 ANO5Q75V66 913 aa22.29■■□□□ 1.16
COL6A2-208ENST00000485591 TRMT1LQ7Z2T5 733 aaKnown RBP22.29■■□□□ 1.16
COL6A2-208ENST00000485591 LEO1Q8WVC0 666 aaPredicted RBP22.29■■□□□ 1.16
COL6A2-208ENST00000485591 SPATA32Q96LK8 384 aa22.29■■□□□ 1.16
COL6A2-208ENST00000485591 CLIC6Q96NY7 704 aa22.29■■□□□ 1.16
COL6A2-208ENST00000485591 TRMT13Q9NUP7 481 aaKnown RBP22.29■■□□□ 1.16
COL6A2-208ENST00000485591 CUTAO60888 179 aa22.28■■□□□ 1.16
COL6A2-208ENST00000485591 YWHABP31946 246 aaKnown RBP22.28■■□□□ 1.16
COL6A2-208ENST00000485591 FAAP100Q0VG06 881 aa22.28■■□□□ 1.16
COL6A2-208ENST00000485591 HYIQ5T013 277 aa22.28■■□□□ 1.16
COL6A2-208ENST00000485591 MARCH8Q5T0T0 291 aa22.28■■□□□ 1.16
COL6A2-208ENST00000485591 POTEGQ6S5H5 508 aa22.28■■□□□ 1.16
COL6A2-208ENST00000485591 ZNF579Q8NAF0 562 aaKnown RBP22.28■■□□□ 1.16
COL6A2-208ENST00000485591 CTAGE1Q96RT6 745 aa22.28■■□□□ 1.16
COL6A2-208ENST00000485591 TRPV6Q9H1D0 765 aa22.28■■□□□ 1.16
COL6A2-208ENST00000485591 MBLAC1A4D2B0 266 aaPredicted RBP22.27■■□□□ 1.16
COL6A2-208ENST00000485591 TMEM150BA6NC51 233 aa22.27■■□□□ 1.16
COL6A2-208ENST00000485591 DDX11L8A8MPP1 907 aa22.27■■□□□ 1.16
COL6A2-208ENST00000485591 XRCC6P12956 609 aaKnown RBP eCLIP22.27■■□□□ 1.16
COL6A2-208ENST00000485591 UBA7P41226 1012 aa22.27■■□□□ 1.16
COL6A2-208ENST00000485591 IGBP1P78318 339 aa22.27■■□□□ 1.16
COL6A2-208ENST00000485591 ZNF200P98182 395 aaPredicted RBP22.27■■□□□ 1.16
COL6A2-208ENST00000485591 TARBP2Q15633 366 aaKnown RBP22.27■■□□□ 1.16
COL6A2-208ENST00000485591 ECM1Q16610 540 aa22.27■■□□□ 1.16
COL6A2-208ENST00000485591 OTUD6AQ7L8S5 288 aa22.27■■□□□ 1.16
COL6A2-208ENST00000485591 CABP7Q86V35 215 aa22.27■■□□□ 1.16
COL6A2-208ENST00000485591 TRAPPC12Q8WVT3 735 aa22.27■■□□□ 1.16
COL6A2-208ENST00000485591 TANC1Q9C0D5 1861 aa22.27■■□□□ 1.16
COL6A2-208ENST00000485591 CCSER1Q9C0I3 900 aa22.27■■□□□ 1.16
COL6A2-208ENST00000485591 ANKEF1Q9NU02 776 aa22.27■■□□□ 1.16
COL6A2-208ENST00000485591 TUBE1Q9UJT0 475 aa22.27■■□□□ 1.16
COL6A2-208ENST00000485591 NOD1Q9Y239 953 aa22.27■■□□□ 1.16
COL6A2-208ENST00000485591 EVPLQ92817 2033 aa22.26■■□□□ 1.15
COL6A2-208ENST00000485591 TREHO43280 583 aa22.26■■□□□ 1.15
COL6A2-208ENST00000485591 EVI5O60447 810 aa22.26■■□□□ 1.15
COL6A2-208ENST00000485591 CLTBP09497 229 aa22.26■■□□□ 1.15
COL6A2-208ENST00000485591 ME1P48163 572 aa22.26■■□□□ 1.15
COL6A2-208ENST00000485591 AXDND1Q5T1B0 1012 aaPredicted RBP22.26■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms