RNA–Protein interactions for RNA: ENST00000484886.1

SNX17-206, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 568 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-206ENST00000484886 HSFX4A0A1B0GTS1 333 aaPredicted RBP21.56■■□□□ 1.04
SNX17-206ENST00000484886 HSFX3A0A1B0GWH4 333 aaPredicted RBP21.56■■□□□ 1.04
SNX17-206ENST00000484886 MBLAC1A4D2B0 266 aaPredicted RBP21.56■■□□□ 1.04
SNX17-206ENST00000484886 NBNO60934 754 aa21.56■■□□□ 1.04
SNX17-206ENST00000484886 GJB2P29033 226 aa21.56■■□□□ 1.04
SNX17-206ENST00000484886 MARCH8Q5T0T0 291 aa21.56■■□□□ 1.04
SNX17-206ENST00000484886 SLFN12Q8IYM2 578 aa21.56■■□□□ 1.04
SNX17-206ENST00000484886 RDM1Q8NG50 284 aa21.56■■□□□ 1.04
SNX17-206ENST00000484886 DNAJB3Q8WWF6 145 aa21.56■■□□□ 1.04
SNX17-206ENST00000484886 BBXQ8WY36 941 aaPredicted RBP21.56■■□□□ 1.04
SNX17-206ENST00000484886 VWCEQ96DN2 955 aa21.56■■□□□ 1.04
SNX17-206ENST00000484886 FAM167AQ96KS9 214 aa21.56■■□□□ 1.04
SNX17-206ENST00000484886 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.56■■□□□ 1.04
SNX17-206ENST00000484886 IGSF9BQ9UPX0 1349 aa21.55■■□□□ 1.04
SNX17-206ENST00000484886 TBX3O15119 743 aa21.55■■□□□ 1.04
SNX17-206ENST00000484886 NEMFO60524 1076 aa21.55■■□□□ 1.04
SNX17-206ENST00000484886 SMAD3P84022 425 aaKnown RBP21.55■■□□□ 1.04
SNX17-206ENST00000484886 PRKCEQ02156 737 aa21.55■■□□□ 1.04
SNX17-206ENST00000484886 CALCRLQ16602 461 aa21.55■■□□□ 1.04
SNX17-206ENST00000484886 ZNF484Q5JVG2 852 aa21.55■■□□□ 1.04
SNX17-206ENST00000484886 TRAF7Q6Q0C0 670 aa21.55■■□□□ 1.04
SNX17-206ENST00000484886 COL1A2P08123 1366 aa21.55■■□□□ 1.04
SNX17-206ENST00000484886 ATP4AP20648 1035 aa21.54■■□□□ 1.04
SNX17-206ENST00000484886 MCM7P33993 719 aa21.54■■□□□ 1.04
SNX17-206ENST00000484886 UGCGQ16739 394 aa21.54■■□□□ 1.04
SNX17-206ENST00000484886 RASIP1Q5U651 963 aa21.54■■□□□ 1.04
SNX17-206ENST00000484886 MCTP1Q6DN14 999 aa21.54■■□□□ 1.04
SNX17-206ENST00000484886 CNKSR3Q6P9H4 555 aa21.54■■□□□ 1.04
SNX17-206ENST00000484886 MTHFD1LQ6UB35 978 aa21.54■■□□□ 1.04
SNX17-206ENST00000484886 NOSTRINQ8IVI9 506 aa21.54■■□□□ 1.04
SNX17-206ENST00000484886 NRBP2Q9NSY0 501 aa21.54■■□□□ 1.04
SNX17-206ENST00000484886 WDR81Q562E7 1941 aa21.54■■□□□ 1.04
SNX17-206ENST00000484886 H3BQV1 296 aa21.53■■□□□ 1.04
SNX17-206ENST00000484886 M0QZ92 97 aa21.53■■□□□ 1.04
SNX17-206ENST00000484886 CXCL10P02778 98 aa21.53■■□□□ 1.04
SNX17-206ENST00000484886 OATP04181 439 aa21.53■■□□□ 1.04
SNX17-206ENST00000484886 RPLP2P05387 115 aaKnown RBP21.53■■□□□ 1.04
SNX17-206ENST00000484886 KLRC1P26715 233 aa21.53■■□□□ 1.04
SNX17-206ENST00000484886 KCNJ6P48051 423 aa21.53■■□□□ 1.04
SNX17-206ENST00000484886 PPP2R5CQ13362 524 aa21.53■■□□□ 1.04
SNX17-206ENST00000484886 MBTPS1Q14703 1052 aa21.53■■□□□ 1.04
SNX17-206ENST00000484886 GPNMBQ14956 572 aa21.53■■□□□ 1.04
SNX17-206ENST00000484886 NCAPH2Q6IBW4 605 aa21.53■■□□□ 1.04
SNX17-206ENST00000484886 FAM109BQ6ICB4 259 aaPredicted RBP21.53■■□□□ 1.04
SNX17-206ENST00000484886 BANK1Q8NDB2 785 aa21.53■■□□□ 1.04
SNX17-206ENST00000484886 HAS1Q92839 578 aa21.53■■□□□ 1.04
SNX17-206ENST00000484886 VAV3Q9UKW4 847 aa21.53■■□□□ 1.04
SNX17-206ENST00000484886 NOL7Q9UMY1 257 aaKnown RBP21.53■■□□□ 1.04
SNX17-206ENST00000484886 CEP131Q9UPN4 1083 aa21.53■■□□□ 1.04
SNX17-206ENST00000484886 PCDHA2Q9Y5H9 948 aa21.53■■□□□ 1.04
SNX17-206ENST00000484886 TET1Q8NFU7 2136 aa21.53■■□□□ 1.04
SNX17-206ENST00000484886 GRXCR1A8MXD5 290 aa21.52■■□□□ 1.04
SNX17-206ENST00000484886 WNT7AO00755 349 aa21.52■■□□□ 1.04
SNX17-206ENST00000484886 BAIAP3O94812 1187 aa21.52■■□□□ 1.04
SNX17-206ENST00000484886 MRPS6P82932 125 aaKnown RBP21.52■■□□□ 1.04
SNX17-206ENST00000484886 TMEM62Q0P6H9 643 aa21.52■■□□□ 1.04
SNX17-206ENST00000484886 GPR153Q6NV75 609 aa21.52■■□□□ 1.04
SNX17-206ENST00000484886 METTL13Q8N6R0 699 aa21.52■■□□□ 1.04
SNX17-206ENST00000484886 SEPT9Q9UHD8 586 aaPredicted RBP21.52■■□□□ 1.04
SNX17-206ENST00000484886 LAMA3Q16787 3333 aa21.51■■□□□ 1.03
SNX17-206ENST00000484886 KIF28PB7ZC32 967 aa21.51■■□□□ 1.03
SNX17-206ENST00000484886 EML1O00423 815 aa21.51■■□□□ 1.03
SNX17-206ENST00000484886 ZNF862O60290 1169 aa21.51■■□□□ 1.03
SNX17-206ENST00000484886 ATP2A2P16615 1042 aaKnown RBP21.51■■□□□ 1.03
SNX17-206ENST00000484886 TXKP42681 527 aa21.51■■□□□ 1.03
SNX17-206ENST00000484886 IKBKEQ14164 716 aa21.51■■□□□ 1.03
SNX17-206ENST00000484886 ZNF697Q5TEC3 545 aa21.51■■□□□ 1.03
SNX17-206ENST00000484886 IER5Q5VY09 327 aa21.51■■□□□ 1.03
SNX17-206ENST00000484886 B3GNT9Q6UX72 402 aa21.51■■□□□ 1.03
SNX17-206ENST00000484886 Q7L0L9 218 aa21.51■■□□□ 1.03
SNX17-206ENST00000484886 RPAINQ86UA6 219 aa21.51■■□□□ 1.03
SNX17-206ENST00000484886 DEFB123Q8N688 67 aa21.51■■□□□ 1.03
SNX17-206ENST00000484886 SEPT8Q92599 483 aa21.51■■□□□ 1.03
SNX17-206ENST00000484886 PCDHA12Q9UN75 941 aa21.51■■□□□ 1.03
SNX17-206ENST00000484886 CDY2AQ9Y6F7 541 aa21.51■■□□□ 1.03
SNX17-206ENST00000484886 SMIM35A0A1B0GVV1 85 aa21.5■■□□□ 1.03
SNX17-206ENST00000484886 ZBTB42B2RXF5 422 aa21.5■■□□□ 1.03
SNX17-206ENST00000484886 RBAK-RBAKDNI3L0D1 243 aa21.5■■□□□ 1.03
SNX17-206ENST00000484886 CHRNA1P02708 482 aa21.5■■□□□ 1.03
SNX17-206ENST00000484886 PSMC5P62195 406 aa21.5■■□□□ 1.03
SNX17-206ENST00000484886 ZNF174Q15697 407 aa21.5■■□□□ 1.03
SNX17-206ENST00000484886 FAM26DQ5JW98 314 aa21.5■■□□□ 1.03
SNX17-206ENST00000484886 TTC38Q5R3I4 469 aa21.5■■□□□ 1.03
SNX17-206ENST00000484886 MSRAQ9UJ68 235 aa21.5■■□□□ 1.03
SNX17-206ENST00000484886 DDX11L8A8MPP1 907 aa21.49■■□□□ 1.03
SNX17-206ENST00000484886 C22orf31O95567 290 aa21.49■■□□□ 1.03
SNX17-206ENST00000484886 GHRP10912 638 aa21.49■■□□□ 1.03
SNX17-206ENST00000484886 DNAJB2P25686 324 aa21.49■■□□□ 1.03
SNX17-206ENST00000484886 XKR3Q5GH77 459 aa21.49■■□□□ 1.03
SNX17-206ENST00000484886 DBF4BQ8NFT6 615 aa21.49■■□□□ 1.03
SNX17-206ENST00000484886 FAM161BQ96MY7 647 aa21.49■■□□□ 1.03
SNX17-206ENST00000484886 SLC9A7Q96T83 725 aa21.49■■□□□ 1.03
SNX17-206ENST00000484886 TTC12Q9H892 705 aaPredicted RBP21.49■■□□□ 1.03
SNX17-206ENST00000484886 GINS2Q9Y248 185 aa21.49■■□□□ 1.03
SNX17-206ENST00000484886 TRPV2Q9Y5S1 764 aa21.49■■□□□ 1.03
SNX17-206ENST00000484886 ABHD14A-ACY1A0A1B0GW23 586 aa21.48■■□□□ 1.03
SNX17-206ENST00000484886 MAGEB2O15479 319 aa21.48■■□□□ 1.03
SNX17-206ENST00000484886 DKC1O60832 514 aaKnown RBP eCLIP21.48■■□□□ 1.03
SNX17-206ENST00000484886 EFCAB14O75071 495 aa21.48■■□□□ 1.03
SNX17-206ENST00000484886 P4HBP07237 508 aaKnown RBP21.48■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms