RNA–Protein interactions for RNA: ENST00000484767.5

SND1-211, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 4

Gene SND1, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-211ENST00000484767 FTCDO95954 541 aa10.04□□□□□ -0.8
SND1-211ENST00000484767 H2AFZP0C0S5 128 aa10.04□□□□□ -0.8
SND1-211ENST00000484767 CCDC172P0C7W6 258 aa10.04□□□□□ -0.8
SND1-211ENST00000484767 CYP11B2P19099 503 aa10.04□□□□□ -0.8
SND1-211ENST00000484767 RPL13P26373 211 aaKnown RBP10.04□□□□□ -0.8
SND1-211ENST00000484767 HNRNPH1P31943 449 aaKnown RBP10.04□□□□□ -0.8
SND1-211ENST00000484767 SMTNP53814 917 aa10.04□□□□□ -0.8
SND1-211ENST00000484767 RHBDL3P58872 404 aa10.04□□□□□ -0.8
SND1-211ENST00000484767 GABPAQ06546 454 aa10.04□□□□□ -0.8
SND1-211ENST00000484767 DIXDC1Q155Q3 683 aa10.04□□□□□ -0.8
SND1-211ENST00000484767 CEP85LQ5SZL2 805 aa10.04□□□□□ -0.8
SND1-211ENST00000484767 DPY19L2P1Q6NXN4 242 aa10.04□□□□□ -0.8
SND1-211ENST00000484767 C6orf89Q6UWU4 347 aa10.04□□□□□ -0.8
SND1-211ENST00000484767 H2AFVQ71UI9 128 aa10.04□□□□□ -0.8
SND1-211ENST00000484767 KCNK18Q7Z418 384 aa10.04□□□□□ -0.8
SND1-211ENST00000484767 GPBP1Q86WP2 473 aa10.04□□□□□ -0.8
SND1-211ENST00000484767 ANKRD13CQ8N6S4 541 aa10.04□□□□□ -0.8
SND1-211ENST00000484767 TPCN2Q8NHX9 752 aa10.04□□□□□ -0.8
SND1-211ENST00000484767 HAS1Q92839 578 aa10.04□□□□□ -0.8
SND1-211ENST00000484767 EEF2KMTQ96G04 330 aa10.04□□□□□ -0.8
SND1-211ENST00000484767 ZFP91Q96JP5 570 aaPredicted RBP10.04□□□□□ -0.8
SND1-211ENST00000484767 CCT8L2Q96SF2 557 aa10.04□□□□□ -0.8
SND1-211ENST00000484767 NAP1L3Q99457 506 aaPredicted RBP10.04□□□□□ -0.8
SND1-211ENST00000484767 NCAPGQ9BPX3 1015 aa10.04□□□□□ -0.8
SND1-211ENST00000484767 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.04□□□□□ -0.83e-8■■■□□ 19.2
SND1-211ENST00000484767 RAB17Q9H0T7 212 aa10.04□□□□□ -0.8
SND1-211ENST00000484767 VCPKMTQ9H867 229 aa10.04□□□□□ -0.8
SND1-211ENST00000484767 VAT1LQ9HCJ6 419 aa10.04□□□□□ -0.8
SND1-211ENST00000484767 KCNMB3Q9NPA1 279 aa10.04□□□□□ -0.8
SND1-211ENST00000484767 EHD2Q9NZN4 543 aa10.04□□□□□ -0.8
SND1-211ENST00000484767 ARMCX3Q9UH62 379 aaPredicted RBP10.04□□□□□ -0.8
SND1-211ENST00000484767 SAP30BPQ9UHR5 308 aaKnown RBP10.04□□□□□ -0.8
SND1-211ENST00000484767 STXBP5LQ9Y2K9 1186 aa10.04□□□□□ -0.8
SND1-211ENST00000484767 NFS1Q9Y697 457 aa10.04□□□□□ -0.8
SND1-211ENST00000484767 NCANO14594 1321 aa10.04□□□□□ -0.8
SND1-211ENST00000484767 UBE4BO95155 1302 aa10.04□□□□□ -0.8
SND1-211ENST00000484767 GMNCA6NCL1 334 aa10.03□□□□□ -0.8
SND1-211ENST00000484767 FAM187AA6NFU0 413 aa10.03□□□□□ -0.8
SND1-211ENST00000484767 H0YHG0 523 aa10.03□□□□□ -0.8
SND1-211ENST00000484767 KCNK3O14649 394 aa10.03□□□□□ -0.8
SND1-211ENST00000484767 ZBTB5O15062 677 aa10.03□□□□□ -0.8
SND1-211ENST00000484767 KRT14P02533 472 aa10.03□□□□□ -0.8
SND1-211ENST00000484767 ZBTB48P10074 688 aaPredicted RBP10.03□□□□□ -0.8
SND1-211ENST00000484767 GHRP10912 638 aa10.03□□□□□ -0.8
SND1-211ENST00000484767 HSPA6P17066 643 aa10.03□□□□□ -0.8
SND1-211ENST00000484767 GAP43P17677 238 aa10.03□□□□□ -0.8
SND1-211ENST00000484767 HSD17B3P37058 310 aa10.03□□□□□ -0.8
SND1-211ENST00000484767 TNNI2P48788 182 aa10.03□□□□□ -0.8
SND1-211ENST00000484767 SLC12A3P55017 1021 aa10.03□□□□□ -0.8
SND1-211ENST00000484767 JAM2P57087 298 aa10.03□□□□□ -0.8
SND1-211ENST00000484767 ERVK-9P63128 1117 aa10.03□□□□□ -0.8
SND1-211ENST00000484767 ACTN3Q08043 901 aaPredicted RBP10.03□□□□□ -0.8
SND1-211ENST00000484767 HLTFQ14527 1009 aaKnown RBP eCLIP10.03□□□□□ -0.82e-6■■□□□ 13.7
SND1-211ENST00000484767 LRRC41Q15345 812 aa10.03□□□□□ -0.8
SND1-211ENST00000484767 EXOC3L4Q17RC7 722 aa10.03□□□□□ -0.8
SND1-211ENST00000484767 KNOP1Q1ED39 458 aaKnown RBP10.03□□□□□ -0.8
SND1-211ENST00000484767 LACTB2Q53H82 288 aaPredicted RBP10.03□□□□□ -0.8
SND1-211ENST00000484767 HERC4Q5GLZ8 1057 aaPredicted RBP10.03□□□□□ -0.8
SND1-211ENST00000484767 ALKBH5Q6P6C2 394 aaKnown RBP10.03□□□□□ -0.8
SND1-211ENST00000484767 BICDL1Q6ZP65 573 aa10.03□□□□□ -0.8
SND1-211ENST00000484767 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.03□□□□□ -0.8
SND1-211ENST00000484767 EPM2AIP1Q7L775 607 aaPredicted RBP10.03□□□□□ -0.8
SND1-211ENST00000484767 TMC4Q7Z404 712 aa10.03□□□□□ -0.8
SND1-211ENST00000484767 SH2D3CQ8N5H7 860 aa10.03□□□□□ -0.8
SND1-211ENST00000484767 FAM133AQ8N9E0 248 aa10.03□□□□□ -0.8
SND1-211ENST00000484767 MAGEC3Q8TD91 643 aa10.03□□□□□ -0.8
SND1-211ENST00000484767 SCFD1Q8WVM8 642 aa10.03□□□□□ -0.8
SND1-211ENST00000484767 COA7Q96BR5 231 aa10.03□□□□□ -0.8
SND1-211ENST00000484767 SPAG5Q96R06 1193 aa10.03□□□□□ -0.8
SND1-211ENST00000484767 MYCBPQ99417 103 aaPredicted RBP10.03□□□□□ -0.8
SND1-211ENST00000484767 PSMB7Q99436 277 aa10.03□□□□□ -0.8
SND1-211ENST00000484767 NUDT12Q9BQG2 462 aa10.03□□□□□ -0.8
SND1-211ENST00000484767 MKNK1Q9BUB5 465 aa10.03□□□□□ -0.8
SND1-211ENST00000484767 FAM129AQ9BZQ8 928 aa10.03□□□□□ -0.8
SND1-211ENST00000484767 DHX36Q9H2U1 1008 aaKnown RBP10.03□□□□□ -0.8
SND1-211ENST00000484767 QTRT2Q9H974 415 aaKnown RBP10.03□□□□□ -0.8
SND1-211ENST00000484767 JMJD4Q9H9V9 463 aa10.03□□□□□ -0.8
SND1-211ENST00000484767 CD209Q9NNX6 404 aa10.03□□□□□ -0.8
SND1-211ENST00000484767 TYW1Q9NV66 732 aaKnown RBP10.03□□□□□ -0.8
SND1-211ENST00000484767 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.03□□□□□ -0.83e-8■■■■□ 21.2
SND1-211ENST00000484767 SMARCAL1Q9NZC9 954 aa10.03□□□□□ -0.8
SND1-211ENST00000484767 ADAMTS1Q9UHI8 967 aa10.03□□□□□ -0.8
SND1-211ENST00000484767 NAGPAQ9UK23 515 aa10.03□□□□□ -0.8
SND1-211ENST00000484767 CAPN7Q9Y6W3 813 aa10.03□□□□□ -0.8
SND1-211ENST00000484767 TMCO5BA8MYB1 307 aa10.02□□□□□ -0.81
SND1-211ENST00000484767 EIF3DO15371 548 aaKnown RBP eCLIP10.02□□□□□ -0.81
SND1-211ENST00000484767 SART1O43290 800 aaKnown RBP10.02□□□□□ -0.81
SND1-211ENST00000484767 TRAPPC3O43617 180 aa10.02□□□□□ -0.81
SND1-211ENST00000484767 CEP104O60308 925 aa10.02□□□□□ -0.81
SND1-211ENST00000484767 KRT18P05783 430 aaKnown RBP10.02□□□□□ -0.81
SND1-211ENST00000484767 UCHL3P15374 230 aa10.02□□□□□ -0.81
SND1-211ENST00000484767 LMNB1P20700 586 aa10.02□□□□□ -0.81
SND1-211ENST00000484767 MUTP22033 750 aa10.02□□□□□ -0.81
SND1-211ENST00000484767 RFX1P22670 979 aa10.02□□□□□ -0.81
SND1-211ENST00000484767 NR2F2P24468 414 aa10.02□□□□□ -0.81
SND1-211ENST00000484767 ECHS1P30084 290 aa10.02□□□□□ -0.81
SND1-211ENST00000484767 ATP1A2P50993 1020 aa10.02□□□□□ -0.81
SND1-211ENST00000484767 GUCY2FP51841 1108 aa10.02□□□□□ -0.81
SND1-211ENST00000484767 DRG2P55039 364 aaKnown RBP10.02□□□□□ -0.81
SND1-211ENST00000484767 GSCP56915 257 aaPredicted RBP10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms