RNA–Protein interactions for RNA: ENST00000484574.1

POLR1B-213, Transcript of RNA polymerase I subunit B, humanhuman

TSL 2

Gene POLR1B, Length 551 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1B-213ENST00000484574 ODR4Q5SWX8 454 aa13.56□□□□□ -0.24
POLR1B-213ENST00000484574 LRCH2Q5VUJ6 765 aa13.56□□□□□ -0.24
POLR1B-213ENST00000484574 SWSAP1Q6NVH7 229 aa13.56□□□□□ -0.24
POLR1B-213ENST00000484574 PDXDC2PQ6P474 469 aa13.56□□□□□ -0.24
POLR1B-213ENST00000484574 MTHFD1LQ6UB35 978 aa13.56□□□□□ -0.24
POLR1B-213ENST00000484574 B3GNT9Q6UX72 402 aa13.56□□□□□ -0.24
POLR1B-213ENST00000484574 NEK8Q86SG6 692 aa13.56□□□□□ -0.24
POLR1B-213ENST00000484574 CCDC60Q8IWA6 550 aaPredicted RBP13.56□□□□□ -0.24
POLR1B-213ENST00000484574 DBF4BQ8NFT6 615 aa13.56□□□□□ -0.24
POLR1B-213ENST00000484574 RAD9AQ99638 391 aa13.56□□□□□ -0.24
POLR1B-213ENST00000484574 DISC1Q9NRI5 854 aa13.56□□□□□ -0.24
POLR1B-213ENST00000484574 NRBP2Q9NSY0 501 aa13.56□□□□□ -0.24
POLR1B-213ENST00000484574 DKC1O60832 514 aaKnown RBP eCLIP13.55□□□□□ -0.24
POLR1B-213ENST00000484574 GJB5O95377 273 aa13.55□□□□□ -0.24
POLR1B-213ENST00000484574 CHRNA1P02708 482 aa13.55□□□□□ -0.24
POLR1B-213ENST00000484574 POU3F3P20264 500 aaPredicted RBP13.55□□□□□ -0.24
POLR1B-213ENST00000484574 KRT2P35908 639 aa13.55□□□□□ -0.24
POLR1B-213ENST00000484574 PBX2P40425 430 aa13.55□□□□□ -0.24
POLR1B-213ENST00000484574 MRPS6P82932 125 aaKnown RBP13.55□□□□□ -0.24
POLR1B-213ENST00000484574 HMGN5P82970 282 aaKnown RBP13.55□□□□□ -0.24
POLR1B-213ENST00000484574 CDC42EP1Q00587 391 aa13.55□□□□□ -0.24
POLR1B-213ENST00000484574 MGAT3Q09327 533 aa13.55□□□□□ -0.24
POLR1B-213ENST00000484574 TRIM29Q14134 588 aa13.55□□□□□ -0.24
POLR1B-213ENST00000484574 ETNPPLQ8TBG4 499 aa13.55□□□□□ -0.24
POLR1B-213ENST00000484574 AIFM3Q96NN9 605 aa13.55□□□□□ -0.24
POLR1B-213ENST00000484574 GAS2L1Q99501 681 aaPredicted RBP13.55□□□□□ -0.24
POLR1B-213ENST00000484574 FTHL17Q9BXU8 183 aa13.55□□□□□ -0.24
POLR1B-213ENST00000484574 IFIH1Q9BYX4 1025 aaKnown RBP13.55□□□□□ -0.24
POLR1B-213ENST00000484574 RNF216Q9NWF9 866 aaPredicted RBP13.55□□□□□ -0.24
POLR1B-213ENST00000484574 DDX25Q9UHL0 483 aaKnown RBP13.55□□□□□ -0.24
POLR1B-213ENST00000484574 KCNJ14Q9UNX9 436 aa13.55□□□□□ -0.24
POLR1B-213ENST00000484574 YBX2Q9Y2T7 364 aaKnown RBP13.55□□□□□ -0.24
POLR1B-213ENST00000484574 PPME1Q9Y570 386 aa13.55□□□□□ -0.24
POLR1B-213ENST00000484574 INSL6Q9Y581 213 aa13.55□□□□□ -0.24
POLR1B-213ENST00000484574 IGSF9BQ9UPX0 1349 aa13.55□□□□□ -0.24
POLR1B-213ENST00000484574 GBF1Q92538 1859 aa13.55□□□□□ -0.24
POLR1B-213ENST00000484574 COL4A6Q14031 1691 aa13.54□□□□□ -0.24
POLR1B-213ENST00000484574 DDX39AO00148 427 aaKnown RBP13.54□□□□□ -0.24
POLR1B-213ENST00000484574 TLL1O43897 1013 aa13.54□□□□□ -0.24
POLR1B-213ENST00000484574 MMP1P03956 469 aa13.54□□□□□ -0.24
POLR1B-213ENST00000484574 KLRC1P26715 233 aa13.54□□□□□ -0.24
POLR1B-213ENST00000484574 PPP2R5CQ13362 524 aa13.54□□□□□ -0.24
POLR1B-213ENST00000484574 GRIN2CQ14957 1233 aa13.54□□□□□ -0.24
POLR1B-213ENST00000484574 RABEP1Q15276 862 aa13.54□□□□□ -0.24
POLR1B-213ENST00000484574 INF2Q27J81 1249 aa13.54□□□□□ -0.24
POLR1B-213ENST00000484574 PPP2R2DQ66LE6 453 aa13.54□□□□□ -0.24
POLR1B-213ENST00000484574 RUFY4Q6ZNE9 571 aa13.54□□□□□ -0.24
POLR1B-213ENST00000484574 TSHZ1Q6ZSZ6 1077 aa13.54□□□□□ -0.24
POLR1B-213ENST00000484574 EXOC8Q8IYI6 725 aa13.54□□□□□ -0.24
POLR1B-213ENST00000484574 SLFN12Q8IYM2 578 aa13.54□□□□□ -0.24
POLR1B-213ENST00000484574 DNAJB3Q8WWF6 145 aa13.54□□□□□ -0.24
POLR1B-213ENST00000484574 TOP1MTQ969P6 601 aa13.54□□□□□ -0.24
POLR1B-213ENST00000484574 KIF2CQ99661 725 aa13.54□□□□□ -0.24
POLR1B-213ENST00000484574 NKX2-4Q9H2Z4 354 aa13.54□□□□□ -0.24
POLR1B-213ENST00000484574 KCNMB3Q9NPA1 279 aa13.54□□□□□ -0.24
POLR1B-213ENST00000484574 SAMM50Q9Y512 469 aa13.54□□□□□ -0.24
POLR1B-213ENST00000484574 MICAL3Q7RTP6 2002 aa13.53□□□□□ -0.24
POLR1B-213ENST00000484574 ST18O60284 1047 aa13.53□□□□□ -0.24
POLR1B-213ENST00000484574 BAG4O95429 457 aaKnown RBP13.53□□□□□ -0.24
POLR1B-213ENST00000484574 FOSL2P15408 326 aa13.53□□□□□ -0.24
POLR1B-213ENST00000484574 ATP4AP20648 1035 aa13.53□□□□□ -0.24
POLR1B-213ENST00000484574 TMOD1P28289 359 aa13.53□□□□□ -0.24
POLR1B-213ENST00000484574 HTRA4P83105 476 aaPredicted RBP13.53□□□□□ -0.24
POLR1B-213ENST00000484574 ORC2Q13416 577 aaPredicted RBP13.53□□□□□ -0.24
POLR1B-213ENST00000484574 LETM2Q2VYF4 491 aa13.53□□□□□ -0.24
POLR1B-213ENST00000484574 FBXO47Q5MNV8 452 aa13.53□□□□□ -0.24
POLR1B-213ENST00000484574 CKAP2LQ8IYA6 745 aa13.53□□□□□ -0.24
POLR1B-213ENST00000484574 NECAB1Q8N987 351 aa13.53□□□□□ -0.24
POLR1B-213ENST00000484574 TNFRSF25Q93038 417 aa13.53□□□□□ -0.24
POLR1B-213ENST00000484574 FAM161BQ96MY7 647 aa13.53□□□□□ -0.24
POLR1B-213ENST00000484574 ZBED2Q9BTP6 218 aa13.53□□□□□ -0.24
POLR1B-213ENST00000484574 NIFKQ9BYG3 293 aaKnown RBP13.53□□□□□ -0.24
POLR1B-213ENST00000484574 CELF4Q9BZC1 486 aaKnown RBP13.53□□□□□ -0.24
POLR1B-213ENST00000484574 GABBR1Q9UBS5 961 aa13.53□□□□□ -0.24
POLR1B-213ENST00000484574 TRPV2Q9Y5S1 764 aa13.53□□□□□ -0.24
POLR1B-213ENST00000484574 WDR81Q562E7 1941 aa13.52□□□□□ -0.24
POLR1B-213ENST00000484574 LAMA2P24043 3122 aaKnown RBP13.52□□□□□ -0.24
POLR1B-213ENST00000484574 ZBTB42B2RXF5 422 aa13.52□□□□□ -0.25
POLR1B-213ENST00000484574 LARGE1O95461 756 aa13.52□□□□□ -0.25
POLR1B-213ENST00000484574 TDP2O95551 362 aa13.52□□□□□ -0.25
POLR1B-213ENST00000484574 OATP04181 439 aa13.52□□□□□ -0.25
POLR1B-213ENST00000484574 CA3P07451 260 aa13.52□□□□□ -0.25
POLR1B-213ENST00000484574 CTSHP09668 335 aa13.52□□□□□ -0.25
POLR1B-213ENST00000484574 MCM2P49736 904 aa13.52□□□□□ -0.25
POLR1B-213ENST00000484574 RABGGTBP53611 331 aa13.52□□□□□ -0.25
POLR1B-213ENST00000484574 IGBP1P78318 339 aa13.52□□□□□ -0.25
POLR1B-213ENST00000484574 LPIN1Q14693 890 aa13.52□□□□□ -0.25
POLR1B-213ENST00000484574 SAFBQ15424 915 aaKnown RBP eCLIP13.52□□□□□ -0.25
POLR1B-213ENST00000484574 XKR3Q5GH77 459 aa13.52□□□□□ -0.25
POLR1B-213ENST00000484574 PIK3AP1Q6ZUJ8 805 aa13.52□□□□□ -0.25
POLR1B-213ENST00000484574 MIER3Q7Z3K6 550 aa13.52□□□□□ -0.25
POLR1B-213ENST00000484574 KIAA0319LQ8IZA0 1049 aa13.52□□□□□ -0.25
POLR1B-213ENST00000484574 MAFAQ8NHW3 353 aaPredicted RBP13.52□□□□□ -0.25
POLR1B-213ENST00000484574 SAMD11Q96NU1 681 aa13.52□□□□□ -0.25
POLR1B-213ENST00000484574 UNC45AQ9H3U1 944 aa13.52□□□□□ -0.25
POLR1B-213ENST00000484574 LMCD1Q9NZU5 365 aa13.52□□□□□ -0.25
POLR1B-213ENST00000484574 KIF3AQ9Y496 699 aa13.52□□□□□ -0.25
POLR1B-213ENST00000484574 CDY2AQ9Y6F7 541 aa13.52□□□□□ -0.25
POLR1B-213ENST00000484574 CCNT1O60563 726 aaKnown RBP13.51□□□□□ -0.25
POLR1B-213ENST00000484574 C22orf31O95567 290 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms