RNA–Protein interactions for RNA: ENST00000483876.1

COL17A1-206, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 5

Gene COL17A1, Length 622 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-206ENST00000483876 ZNF76P36508 570 aa6.04□□□□□ -1.44
COL17A1-206ENST00000483876 UBASH3AP57075 661 aa6.04□□□□□ -1.44
COL17A1-206ENST00000483876 FANCCQ00597 558 aa6.04□□□□□ -1.44
COL17A1-206ENST00000483876 SETQ01105 290 aaPredicted RBP6.04□□□□□ -1.44
COL17A1-206ENST00000483876 CACNB2Q08289 660 aaPredicted RBP6.04□□□□□ -1.44
COL17A1-206ENST00000483876 SPIRE1Q08AE8 756 aa6.04□□□□□ -1.44
COL17A1-206ENST00000483876 PPP2R5CQ13362 524 aa6.04□□□□□ -1.44
COL17A1-206ENST00000483876 STIM1Q13586 685 aa6.04□□□□□ -1.44
COL17A1-206ENST00000483876 MOGSQ13724 837 aa6.04□□□□□ -1.44
COL17A1-206ENST00000483876 TRIM60Q495X7 471 aa6.04□□□□□ -1.44
COL17A1-206ENST00000483876 KMT5BQ4FZB7 885 aa6.04□□□□□ -1.44
COL17A1-206ENST00000483876 CEP55Q53EZ4 464 aa6.04□□□□□ -1.44
COL17A1-206ENST00000483876 CDKAL1Q5VV42 579 aa6.04□□□□□ -1.44
COL17A1-206ENST00000483876 ISM2Q6H9L7 571 aa6.04□□□□□ -1.44
COL17A1-206ENST00000483876 GPAT2Q6NUI2 795 aa6.04□□□□□ -1.44
COL17A1-206ENST00000483876 SLC39A5Q6ZMH5 540 aa6.04□□□□□ -1.44
COL17A1-206ENST00000483876 UNC13DQ70J99 1090 aa6.04□□□□□ -1.44
COL17A1-206ENST00000483876 GRAMD1CQ8IYS0 662 aa6.04□□□□□ -1.44
COL17A1-206ENST00000483876 SMCR8Q8TEV9 937 aaPredicted RBP6.04□□□□□ -1.44
COL17A1-206ENST00000483876 NOC3LQ8WTT2 800 aaKnown RBP6.04□□□□□ -1.44
COL17A1-206ENST00000483876 CLEC4DQ8WXI8 215 aa6.04□□□□□ -1.44
COL17A1-206ENST00000483876 LARP4BQ92615 738 aaKnown RBP6.04□□□□□ -1.44
COL17A1-206ENST00000483876 RAD54LQ92698 747 aa6.04□□□□□ -1.44
COL17A1-206ENST00000483876 SLC5A5Q92911 643 aa6.04□□□□□ -1.44
COL17A1-206ENST00000483876 CDK5RAP3Q96JB5 506 aa6.04□□□□□ -1.44
COL17A1-206ENST00000483876 MED15Q96RN5 788 aa6.04□□□□□ -1.44
COL17A1-206ENST00000483876 HSD17B14Q9BPX1 270 aa6.04□□□□□ -1.44
COL17A1-206ENST00000483876 BLOC1S4Q9NUP1 217 aa6.04□□□□□ -1.44
COL17A1-206ENST00000483876 EIF2AK3Q9NZJ5 1116 aaKnown RBP6.04□□□□□ -1.44
COL17A1-206ENST00000483876 TMOD4Q9NZQ9 345 aa6.04□□□□□ -1.44
COL17A1-206ENST00000483876 GJD2Q9UKL4 321 aa6.04□□□□□ -1.44
COL17A1-206ENST00000483876 CCPG1Q9ULG6 757 aa6.04□□□□□ -1.44
COL17A1-206ENST00000483876 NFE2L3Q9Y4A8 694 aa6.04□□□□□ -1.44
COL17A1-206ENST00000483876 MTCH2Q9Y6C9 303 aa6.04□□□□□ -1.44
COL17A1-206ENST00000483876 ZHX2Q9Y6X8 837 aa6.04□□□□□ -1.44
COL17A1-206ENST00000483876 ANKRD11Q6UB99 2663 aaPredicted RBP6.04□□□□□ -1.44
COL17A1-206ENST00000483876 FRMPD4Q14CM0 1322 aa6.03□□□□□ -1.44
COL17A1-206ENST00000483876 MGAMO43451 1857 aa6.03□□□□□ -1.44
COL17A1-206ENST00000483876 A0A087WWV3 80 aa6.03□□□□□ -1.44
COL17A1-206ENST00000483876 BICDL2A1A5D9 508 aa6.03□□□□□ -1.44
COL17A1-206ENST00000483876 DNM1LO00429 736 aa6.03□□□□□ -1.44
COL17A1-206ENST00000483876 PSMA7O14818 248 aa6.03□□□□□ -1.44
COL17A1-206ENST00000483876 MSH4O15457 936 aa6.03□□□□□ -1.44
COL17A1-206ENST00000483876 PSMD10O75832 226 aa6.03□□□□□ -1.44
COL17A1-206ENST00000483876 KIF20AO95235 890 aa6.03□□□□□ -1.44
COL17A1-206ENST00000483876 CFBP00751 764 aa6.03□□□□□ -1.44
COL17A1-206ENST00000483876 SERPINC1P01008 464 aa6.03□□□□□ -1.44
COL17A1-206ENST00000483876 CD44P16070 742 aaKnown RBP6.03□□□□□ -1.44
COL17A1-206ENST00000483876 POU3F3P20264 500 aaPredicted RBP6.03□□□□□ -1.44
COL17A1-206ENST00000483876 CYP2B6P20813 491 aa6.03□□□□□ -1.44
COL17A1-206ENST00000483876 CDK11BP21127 795 aaKnown RBP6.03□□□□□ -1.44
COL17A1-206ENST00000483876 EEF1GP26641 437 aaKnown RBP6.03□□□□□ -1.44
COL17A1-206ENST00000483876 HOXA13P31271 388 aaPredicted RBP6.03□□□□□ -1.44
COL17A1-206ENST00000483876 CCT6AP40227 531 aaKnown RBP6.03□□□□□ -1.44
COL17A1-206ENST00000483876 PRCPP42785 496 aa6.03□□□□□ -1.44
COL17A1-206ENST00000483876 SNAP25P60880 206 aa6.03□□□□□ -1.44
COL17A1-206ENST00000483876 EHHADHQ08426 723 aa6.03□□□□□ -1.44
COL17A1-206ENST00000483876 MTMR2Q13614 643 aa6.03□□□□□ -1.44
COL17A1-206ENST00000483876 NR1I3Q14994 352 aa6.03□□□□□ -1.44
COL17A1-206ENST00000483876 ZYXQ15942 572 aaKnown RBP6.03□□□□□ -1.44
COL17A1-206ENST00000483876 PRR16Q569H4 304 aa6.03□□□□□ -1.44
COL17A1-206ENST00000483876 PCNX4Q63HM2 1172 aa6.03□□□□□ -1.44
COL17A1-206ENST00000483876 CCDC174Q6PII3 467 aa6.03□□□□□ -1.44
COL17A1-206ENST00000483876 B3GNT9Q6UX72 402 aa6.03□□□□□ -1.44
COL17A1-206ENST00000483876 LBX2Q6XYB7 198 aa6.03□□□□□ -1.44
COL17A1-206ENST00000483876 CCDC186Q7Z3E2 898 aa6.03□□□□□ -1.44
COL17A1-206ENST00000483876 CATSPER3Q86XQ3 398 aa6.03□□□□□ -1.44
COL17A1-206ENST00000483876 LRRC8AQ8IWT6 810 aa6.03□□□□□ -1.44
COL17A1-206ENST00000483876 DRC7Q8IY82 874 aa6.03□□□□□ -1.44
COL17A1-206ENST00000483876 ANKRD13CQ8N6S4 541 aa6.03□□□□□ -1.44
COL17A1-206ENST00000483876 MB21D1Q8N884 522 aa6.03□□□□□ -1.44
COL17A1-206ENST00000483876 ANKRD20A12PQ8NF67 263 aa6.03□□□□□ -1.44
COL17A1-206ENST00000483876 REPS2Q8NFH8 660 aa6.03□□□□□ -1.44
COL17A1-206ENST00000483876 KIAA1524Q8TCG1 905 aa6.03□□□□□ -1.44
COL17A1-206ENST00000483876 SNX29Q8TEQ0 813 aa6.03□□□□□ -1.44
COL17A1-206ENST00000483876 TBC1D5Q92609 795 aa6.03□□□□□ -1.44
COL17A1-206ENST00000483876 RMDN1Q96DB5 314 aa6.03□□□□□ -1.44
COL17A1-206ENST00000483876 AGBL1Q96MI9 1066 aa6.03□□□□□ -1.44
COL17A1-206ENST00000483876 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.03□□□□□ -1.44
COL17A1-206ENST00000483876 MXRA8Q9BRK3 442 aa6.03□□□□□ -1.44
COL17A1-206ENST00000483876 WDR11Q9BZH6 1224 aa6.03□□□□□ -1.44
COL17A1-206ENST00000483876 XPO4Q9C0E2 1151 aaKnown RBP6.03□□□□□ -1.44
COL17A1-206ENST00000483876 BLZF1Q9H2G9 400 aa6.03□□□□□ -1.44
COL17A1-206ENST00000483876 RPAP3Q9H6T3 665 aaPredicted RBP6.03□□□□□ -1.44
COL17A1-206ENST00000483876 TUFT1Q9NNX1 390 aa6.03□□□□□ -1.44
COL17A1-206ENST00000483876 KCND1Q9NSA2 647 aa6.03□□□□□ -1.44
COL17A1-206ENST00000483876 TBC1D22BQ9NU19 505 aa6.03□□□□□ -1.44
COL17A1-206ENST00000483876 FBXO28Q9NVF7 368 aa6.03□□□□□ -1.44
COL17A1-206ENST00000483876 KCND2Q9NZV8 630 aa6.03□□□□□ -1.44
COL17A1-206ENST00000483876 IFNKQ9P0W0 207 aa6.03□□□□□ -1.44
COL17A1-206ENST00000483876 LIMA1Q9UHB6 759 aaKnown RBP6.03□□□□□ -1.44
COL17A1-206ENST00000483876 VAV3Q9UKW4 847 aa6.03□□□□□ -1.44
COL17A1-206ENST00000483876 DNM3Q9UQ16 869 aa6.03□□□□□ -1.44
COL17A1-206ENST00000483876 CTDP1Q9Y5B0 961 aaPredicted RBP6.03□□□□□ -1.44
COL17A1-206ENST00000483876 COL4A6Q14031 1691 aa6.02□□□□□ -1.45
COL17A1-206ENST00000483876 A0A1B0GTH6 734 aa6.02□□□□□ -1.45
COL17A1-206ENST00000483876 FRMD3A2A2Y4 597 aa6.02□□□□□ -1.45
COL17A1-206ENST00000483876 POTEMA6NI47 508 aa6.02□□□□□ -1.45
COL17A1-206ENST00000483876 MYMKA6NI61 221 aa6.02□□□□□ -1.45
COL17A1-206ENST00000483876 NRDCO43847 1150 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms