RNA–Protein interactions for RNA: ENST00000483656.5

HDAC6-226, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-226ENST00000483656 GLIS3Q8NEA6 775 aa11.24□□□□□ -0.61
HDAC6-226ENST00000483656 COPS5Q92905 334 aa11.24□□□□□ -0.61
HDAC6-226ENST00000483656 PDLIM2Q96JY6 352 aa11.24□□□□□ -0.61
HDAC6-226ENST00000483656 REEP2Q9BRK0 252 aa11.24□□□□□ -0.61
HDAC6-226ENST00000483656 FGFBP2Q9BYJ0 223 aa11.24□□□□□ -0.61
HDAC6-226ENST00000483656 POLD4Q9HCU8 107 aa11.24□□□□□ -0.61
HDAC6-226ENST00000483656 VTA1Q9NP79 307 aa11.24□□□□□ -0.61
HDAC6-226ENST00000483656 SLC39A2Q9NP94 309 aa11.24□□□□□ -0.61
HDAC6-226ENST00000483656 BMP2KQ9NSY1 1161 aaPredicted RBP11.24□□□□□ -0.61
HDAC6-226ENST00000483656 PANK4Q9NVE7 773 aa11.24□□□□□ -0.61
HDAC6-226ENST00000483656 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.24□□□□□ -0.61
HDAC6-226ENST00000483656 GABBR1Q9UBS5 961 aa11.24□□□□□ -0.61
HDAC6-226ENST00000483656 MAPK8IP1Q9UQF2 711 aa11.24□□□□□ -0.61
HDAC6-226ENST00000483656 GOLGA6L19H0YKK7 550 aa11.23□□□□□ -0.61
HDAC6-226ENST00000483656 IGHA2P01877 340 aa11.23□□□□□ -0.61
HDAC6-226ENST00000483656 HOXC6P09630 235 aa11.23□□□□□ -0.61
HDAC6-226ENST00000483656 YWHABP31946 246 aaKnown RBP11.23□□□□□ -0.61
HDAC6-226ENST00000483656 RARRES1P49788 294 aa11.23□□□□□ -0.61
HDAC6-226ENST00000483656 PMS1P54277 932 aaKnown RBP11.23□□□□□ -0.61
HDAC6-226ENST00000483656 MAPK7Q13164 816 aa11.23□□□□□ -0.61
HDAC6-226ENST00000483656 PSMD2Q13200 908 aa11.23□□□□□ -0.61
HDAC6-226ENST00000483656 MIS18BP1Q6P0N0 1132 aa11.23□□□□□ -0.61
HDAC6-226ENST00000483656 METTL7BQ6UX53 244 aa11.23□□□□□ -0.61
HDAC6-226ENST00000483656 ANO5Q75V66 913 aa11.23□□□□□ -0.61
HDAC6-226ENST00000483656 CCDC65Q8IXS2 484 aa11.23□□□□□ -0.61
HDAC6-226ENST00000483656 NELFBQ8WX92 580 aa11.23□□□□□ -0.61
HDAC6-226ENST00000483656 CCDC47Q96A33 483 aaKnown RBP11.23□□□□□ -0.61
HDAC6-226ENST00000483656 PPP1R9BQ96SB3 815 aa11.23□□□□□ -0.61
HDAC6-226ENST00000483656 TINF2Q9BSI4 451 aa11.23□□□□□ -0.61
HDAC6-226ENST00000483656 ANKEF1Q9NU02 776 aa11.23□□□□□ -0.61
HDAC6-226ENST00000483656 FANCLQ9NW38 375 aa11.23□□□□□ -0.61
HDAC6-226ENST00000483656 FLRT1Q9NZU1 646 aa11.23□□□□□ -0.61
HDAC6-226ENST00000483656 TCEAL9Q9UHQ7 104 aa11.23□□□□□ -0.61
HDAC6-226ENST00000483656 RWDD2AQ9UIY3 292 aa11.23□□□□□ -0.61
HDAC6-226ENST00000483656 CTNND2Q9UQB3 1225 aa11.23□□□□□ -0.61
HDAC6-226ENST00000483656 MAFBQ9Y5Q3 323 aaPredicted RBP11.23□□□□□ -0.61
HDAC6-226ENST00000483656 IGSF9BQ9UPX0 1349 aa11.23□□□□□ -0.61
HDAC6-226ENST00000483656 DOCK3Q8IZD9 2030 aa11.23□□□□□ -0.61
HDAC6-226ENST00000483656 ARHGEF35A5YM69 484 aa11.22□□□□□ -0.61
HDAC6-226ENST00000483656 BACH1O14867 736 aa11.22□□□□□ -0.61
HDAC6-226ENST00000483656 ADCY5O95622 1261 aa11.22□□□□□ -0.61
HDAC6-226ENST00000483656 ALDH1A1P00352 501 aa11.22□□□□□ -0.61
HDAC6-226ENST00000483656 KRT18P05783 430 aaKnown RBP11.22□□□□□ -0.61
HDAC6-226ENST00000483656 TXNP10599 105 aaKnown RBP11.22□□□□□ -0.61
HDAC6-226ENST00000483656 ATP1A3P13637 1013 aa11.22□□□□□ -0.61
HDAC6-226ENST00000483656 ZNF18P17022 549 aa11.22□□□□□ -0.61
HDAC6-226ENST00000483656 GUCY2CP25092 1073 aa11.22□□□□□ -0.61
HDAC6-226ENST00000483656 NPEPPSP55786 919 aa11.22□□□□□ -0.61
HDAC6-226ENST00000483656 CAP1Q01518 475 aa11.22□□□□□ -0.61
HDAC6-226ENST00000483656 LRRC41Q15345 812 aa11.22□□□□□ -0.61
HDAC6-226ENST00000483656 WDR81Q562E7 1941 aa11.22□□□□□ -0.61
HDAC6-226ENST00000483656 FAM26FQ5R3K3 315 aa11.22□□□□□ -0.61
HDAC6-226ENST00000483656 GJC2Q5T442 439 aaPredicted RBP11.22□□□□□ -0.61
HDAC6-226ENST00000483656 SPATA1Q5VX52 437 aa11.22□□□□□ -0.61
HDAC6-226ENST00000483656 PLA2G4FQ68DD2 849 aa11.22□□□□□ -0.61
HDAC6-226ENST00000483656 SARM1Q6SZW1 724 aa11.22□□□□□ -0.61
HDAC6-226ENST00000483656 PADI6Q6TGC4 694 aa11.22□□□□□ -0.61
HDAC6-226ENST00000483656 DAW1Q8N136 415 aa11.22□□□□□ -0.61
HDAC6-226ENST00000483656 SCFD2Q8WU76 684 aa11.22□□□□□ -0.61
HDAC6-226ENST00000483656 SEPT1Q8WYJ6 367 aa11.22□□□□□ -0.61
HDAC6-226ENST00000483656 GPR20Q99678 358 aa11.22□□□□□ -0.61
HDAC6-226ENST00000483656 SH2D3AQ9BRG2 576 aa11.22□□□□□ -0.61
HDAC6-226ENST00000483656 GTPBP4Q9BZE4 634 aaKnown RBP11.22□□□□□ -0.61
HDAC6-226ENST00000483656 SEMA6BQ9H3T3 888 aa11.22□□□□□ -0.61
HDAC6-226ENST00000483656 MLXIPQ9HAP2 919 aa11.22□□□□□ -0.61
HDAC6-226ENST00000483656 SAMSN1Q9NSI8 373 aaKnown RBP11.22□□□□□ -0.61
HDAC6-226ENST00000483656 NFE2L3Q9Y4A8 694 aa11.22□□□□□ -0.61
HDAC6-226ENST00000483656 SYNRGQ9UMZ2 1314 aa11.21□□□□□ -0.61
HDAC6-226ENST00000483656 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.21□□□□□ -0.61
HDAC6-226ENST00000483656 TRIM49BA6NDI0 452 aa11.21□□□□□ -0.61
HDAC6-226ENST00000483656 SFI1A8K8P3 1242 aa11.21□□□□□ -0.61
HDAC6-226ENST00000483656 LGR5O75473 907 aa11.21□□□□□ -0.61
HDAC6-226ENST00000483656 CCNE1P24864 410 aa11.21□□□□□ -0.61
HDAC6-226ENST00000483656 ADCYAP1R1P41586 468 aa11.21□□□□□ -0.61
HDAC6-226ENST00000483656 ZNF75DP51815 510 aa11.21□□□□□ -0.61
HDAC6-226ENST00000483656 ZNF131P52739 623 aa11.21□□□□□ -0.61
HDAC6-226ENST00000483656 PRKCEQ02156 737 aa11.21□□□□□ -0.61
HDAC6-226ENST00000483656 ARHGAP1Q07960 439 aa11.21□□□□□ -0.61
HDAC6-226ENST00000483656 PAK1Q13153 545 aa11.21□□□□□ -0.61
HDAC6-226ENST00000483656 ACVR2BQ13705 512 aa11.21□□□□□ -0.61
HDAC6-226ENST00000483656 TTLL4Q14679 1199 aa11.21□□□□□ -0.61
HDAC6-226ENST00000483656 CCL14Q16627 93 aa11.21□□□□□ -0.61
HDAC6-226ENST00000483656 HSDL1Q3SXM5 330 aa11.21□□□□□ -0.61
HDAC6-226ENST00000483656 HERC4Q5GLZ8 1057 aaPredicted RBP11.21□□□□□ -0.61
HDAC6-226ENST00000483656 UTP14CQ5TAP6 766 aaKnown RBP11.21□□□□□ -0.61
HDAC6-226ENST00000483656 TTI2Q6NXR4 508 aa11.21□□□□□ -0.61
HDAC6-226ENST00000483656 EPM2AIP1Q7L775 607 aaPredicted RBP11.21□□□□□ -0.61
HDAC6-226ENST00000483656 SFR1Q86XK3 245 aa11.21□□□□□ -0.61
HDAC6-226ENST00000483656 DHX37Q8IY37 1157 aaKnown RBP11.21□□□□□ -0.61
HDAC6-226ENST00000483656 REM2Q8IYK8 340 aaPredicted RBP11.21□□□□□ -0.61
HDAC6-226ENST00000483656 GUF1Q8N442 669 aaKnown RBP11.21□□□□□ -0.61
HDAC6-226ENST00000483656 MSL3Q8N5Y2 521 aaKnown RBP11.21□□□□□ -0.61
HDAC6-226ENST00000483656 AFAP1L1Q8TED9 768 aa11.21□□□□□ -0.61
HDAC6-226ENST00000483656 ATP6V0A1Q93050 837 aa11.21□□□□□ -0.61
HDAC6-226ENST00000483656 DHTKD1Q96HY7 919 aaPredicted RBP11.21□□□□□ -0.61
HDAC6-226ENST00000483656 FIZ1Q96SL8 496 aa11.21□□□□□ -0.61
HDAC6-226ENST00000483656 DUSP9Q99956 384 aaKnown RBP11.21□□□□□ -0.61
HDAC6-226ENST00000483656 ARHGAP39Q9C0H5 1083 aa11.21□□□□□ -0.61
HDAC6-226ENST00000483656 ZNF302Q9NR11 478 aa11.21□□□□□ -0.61
HDAC6-226ENST00000483656 PDLIM7Q9NR12 457 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms