RNA–Protein interactions for RNA: ENST00000483338.1

COL4A5-205, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL4A5, Length 3,622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-205ENST00000483338 PRPF3O43395 683 aaKnown RBP8.48□□□□□ -1.05
COL4A5-205ENST00000483338 UNC5CO95185 931 aa8.48□□□□□ -1.05
COL4A5-205ENST00000483338 MOCS3O95396 460 aa8.48□□□□□ -1.05
COL4A5-205ENST00000483338 POTEJP0CG39 1038 aa8.48□□□□□ -1.05
COL4A5-205ENST00000483338 TXKP42681 527 aa8.48□□□□□ -1.05
COL4A5-205ENST00000483338 AIMP1Q12904 312 aaKnown RBP8.48□□□□□ -1.05
COL4A5-205ENST00000483338 PARP6Q2NL67 630 aa8.48□□□□□ -1.05
COL4A5-205ENST00000483338 SOGA3Q5TF21 947 aa8.48□□□□□ -1.05
COL4A5-205ENST00000483338 SNX30Q5VWJ9 437 aa8.48□□□□□ -1.05
COL4A5-205ENST00000483338 POTEEQ6S8J3 1075 aa8.48□□□□□ -1.05
COL4A5-205ENST00000483338 FAM133AQ8N9E0 248 aa8.48□□□□□ -1.05
COL4A5-205ENST00000483338 RBM46Q8TBY0 533 aaKnown RBP8.48□□□□□ -1.05
COL4A5-205ENST00000483338 UBLCP1Q8WVY7 318 aaPredicted RBP8.48□□□□□ -1.05
COL4A5-205ENST00000483338 KRT12Q99456 494 aa8.48□□□□□ -1.05
COL4A5-205ENST00000483338 THAP9Q9H5L6 903 aa8.48□□□□□ -1.05
COL4A5-205ENST00000483338 RXFP1Q9HBX9 757 aa8.48□□□□□ -1.05
COL4A5-205ENST00000483338 FAM114A2Q9NRY5 505 aa8.48□□□□□ -1.05
COL4A5-205ENST00000483338 BTBD7Q9P203 1132 aa8.48□□□□□ -1.05
COL4A5-205ENST00000483338 RASAL2Q9UJF2 1139 aa8.48□□□□□ -1.05
COL4A5-205ENST00000483338 FBXO9Q9UK97 447 aaPredicted RBP8.48□□□□□ -1.05
COL4A5-205ENST00000483338 FBXL5Q9UKA1 691 aa8.48□□□□□ -1.05
COL4A5-205ENST00000483338 ADAMTS2O95450 1211 aa8.48□□□□□ -1.05
COL4A5-205ENST00000483338 CDK4P11802 303 aa8.48□□□□□ -1.05
COL4A5-205ENST00000483338 IGHMBP2P38935 993 aaKnown RBP8.48□□□□□ -1.05
COL4A5-205ENST00000483338 CDK7P50613 346 aa8.48□□□□□ -1.05
COL4A5-205ENST00000483338 ERVK-9P63128 1117 aa8.48□□□□□ -1.05
COL4A5-205ENST00000483338 PDE1BQ01064 536 aa8.48□□□□□ -1.05
COL4A5-205ENST00000483338 HLTFQ14527 1009 aaKnown RBP eCLIP8.48□□□□□ -1.05
COL4A5-205ENST00000483338 KPNB1Q14974 876 aaKnown RBP8.48□□□□□ -1.05
COL4A5-205ENST00000483338 SAFBQ15424 915 aaKnown RBP eCLIP8.48□□□□□ -1.05
COL4A5-205ENST00000483338 C3orf62Q6ZUJ4 267 aa8.48□□□□□ -1.05
COL4A5-205ENST00000483338 WDR75Q8IWA0 830 aaKnown RBP8.48□□□□□ -1.05
COL4A5-205ENST00000483338 TMCO5AQ8N6Q1 288 aa8.48□□□□□ -1.05
COL4A5-205ENST00000483338 DIS3LQ8TF46 1054 aaKnown RBP8.48□□□□□ -1.05
COL4A5-205ENST00000483338 ATP6V0A1Q93050 837 aa8.48□□□□□ -1.05
COL4A5-205ENST00000483338 NMD3Q96D46 503 aaKnown RBP8.48□□□□□ -1.05
COL4A5-205ENST00000483338 EIF2AQ9BY44 585 aaKnown RBP8.48□□□□□ -1.05
COL4A5-205ENST00000483338 STK32BQ9NY57 414 aa8.48□□□□□ -1.05
COL4A5-205ENST00000483338 LRWD1Q9UFC0 647 aa8.48□□□□□ -1.05
COL4A5-205ENST00000483338 SERTAD1Q9UHV2 236 aa8.48□□□□□ -1.05
COL4A5-205ENST00000483338 FAM32AQ9Y421 112 aaKnown RBP8.48□□□□□ -1.05
COL4A5-205ENST00000483338 RAD51CO43502 376 aa8.47□□□□□ -1.05
COL4A5-205ENST00000483338 MMP13P45452 471 aa8.47□□□□□ -1.05
COL4A5-205ENST00000483338 IFNAR2P48551 515 aa8.47□□□□□ -1.05
COL4A5-205ENST00000483338 TMEM259Q4ZIN3 620 aa8.47□□□□□ -1.05
COL4A5-205ENST00000483338 C6orf183Q5T699 404 aa8.47□□□□□ -1.05
COL4A5-205ENST00000483338 SLC7A5P1Q8MH63 180 aa8.47□□□□□ -1.05
COL4A5-205ENST00000483338 ZMAT2Q96NC0 199 aaKnown RBP8.47□□□□□ -1.05
COL4A5-205ENST00000483338 SELENOSQ9BQE4 189 aa8.47□□□□□ -1.05
COL4A5-205ENST00000483338 NEUROG2Q9H2A3 272 aa8.47□□□□□ -1.05
COL4A5-205ENST00000483338 CCDC134Q9H6E4 229 aa8.47□□□□□ -1.05
COL4A5-205ENST00000483338 TAB2Q9NYJ8 693 aa8.47□□□□□ -1.05
COL4A5-205ENST00000483338 LUC7L2Q9Y383 392 aaKnown RBP8.47□□□□□ -1.05
COL4A5-205ENST00000483338 DLC1Q96QB1 1528 aa8.47□□□□□ -1.05
COL4A5-205ENST00000483338 ARHGEF10O15013 1369 aa8.47□□□□□ -1.05
COL4A5-205ENST00000483338 SPDYE16A6NNV3 312 aaPredicted RBP8.47□□□□□ -1.05
COL4A5-205ENST00000483338 ZNF263O14978 683 aa8.47□□□□□ -1.05
COL4A5-205ENST00000483338 SCG2P13521 617 aa8.47□□□□□ -1.05
COL4A5-205ENST00000483338 SKIV2L2P42285 1042 aaKnown RBP8.47□□□□□ -1.05
COL4A5-205ENST00000483338 ARFIP2P53365 341 aa8.47□□□□□ -1.05
COL4A5-205ENST00000483338 EVA1CP58658 441 aa8.47□□□□□ -1.05
COL4A5-205ENST00000483338 TRIM67Q6ZTA4 783 aa8.47□□□□□ -1.05
COL4A5-205ENST00000483338 MARK2Q7KZI7 788 aaKnown RBP8.47□□□□□ -1.05
COL4A5-205ENST00000483338 SMYD4Q8IYR2 804 aaPredicted RBP8.47□□□□□ -1.05
COL4A5-205ENST00000483338 ZNF713Q8N859 430 aaPredicted RBP8.47□□□□□ -1.05
COL4A5-205ENST00000483338 SPATA20Q8TB22 786 aa8.47□□□□□ -1.05
COL4A5-205ENST00000483338 LRRC8CQ8TDW0 803 aa8.47□□□□□ -1.05
COL4A5-205ENST00000483338 LRRC45Q96CN5 670 aa8.47□□□□□ -1.05
COL4A5-205ENST00000483338 MAP3K14Q99558 947 aa8.47□□□□□ -1.05
COL4A5-205ENST00000483338 TLR10Q9BXR5 811 aa8.47□□□□□ -1.05
COL4A5-205ENST00000483338 NSRP1Q9H0G5 558 aaKnown RBP8.47□□□□□ -1.05
COL4A5-205ENST00000483338 DHX36Q9H2U1 1008 aaKnown RBP8.47□□□□□ -1.05
COL4A5-205ENST00000483338 PRDM11Q9NQV5 511 aa8.47□□□□□ -1.05
COL4A5-205ENST00000483338 FAIMQ9NVQ4 179 aa8.47□□□□□ -1.05
COL4A5-205ENST00000483338 TBCCD1Q9NVR7 557 aa8.47□□□□□ -1.05
COL4A5-205ENST00000483338 LIMA1Q9UHB6 759 aaKnown RBP8.47□□□□□ -1.05
COL4A5-205ENST00000483338 AKAP12Q02952 1782 aa8.47□□□□□ -1.05
COL4A5-205ENST00000483338 DIP2AQ14689 1571 aa8.47□□□□□ -1.05
COL4A5-205ENST00000483338 GJB6O95452 261 aa8.47□□□□□ -1.05
COL4A5-205ENST00000483338 ANXA1P04083 346 aa8.47□□□□□ -1.05
COL4A5-205ENST00000483338 PABPC4LP0CB38 370 aaKnown RBP8.47□□□□□ -1.05
COL4A5-205ENST00000483338 COPB1P53618 953 aaKnown RBP8.47□□□□□ -1.05
COL4A5-205ENST00000483338 TAF7Q15545 349 aaPredicted RBP8.47□□□□□ -1.05
COL4A5-205ENST00000483338 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.47□□□□□ -1.05
COL4A5-205ENST00000483338 TTC39AQ5SRH9 613 aa8.47□□□□□ -1.05
COL4A5-205ENST00000483338 LRRC8BQ6P9F7 803 aa8.47□□□□□ -1.05
COL4A5-205ENST00000483338 DHX32Q7L7V1 743 aaKnown RBP8.47□□□□□ -1.05
COL4A5-205ENST00000483338 DDX42Q86XP3 938 aaKnown RBP eCLIP8.47□□□□□ -1.05
COL4A5-205ENST00000483338 GAB3Q8WWW8 586 aa8.47□□□□□ -1.05
COL4A5-205ENST00000483338 HSPBAP1Q96EW2 488 aa8.47□□□□□ -1.05
COL4A5-205ENST00000483338 DYDC2Q96IM9 177 aa8.47□□□□□ -1.05
COL4A5-205ENST00000483338 AGXT2Q9BYV1 514 aa8.47□□□□□ -1.05
COL4A5-205ENST00000483338 ISCUQ9H1K1 167 aa8.47□□□□□ -1.05
COL4A5-205ENST00000483338 TPK1Q9H3S4 243 aa8.47□□□□□ -1.05
COL4A5-205ENST00000483338 DENND2DQ9H6A0 471 aaPredicted RBP8.47□□□□□ -1.05
COL4A5-205ENST00000483338 DCLRE1BQ9H816 532 aa8.47□□□□□ -1.05
COL4A5-205ENST00000483338 NHEJ1Q9H9Q4 299 aaPredicted RBP8.47□□□□□ -1.05
COL4A5-205ENST00000483338 ATAD3AQ9NVI7 634 aa8.47□□□□□ -1.05
COL4A5-205ENST00000483338 STOML1Q9UBI4 398 aa8.47□□□□□ -1.05
COL4A5-205ENST00000483338 ZNF142P52746 1687 aaPredicted RBP8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms