RNA–Protein interactions for RNA: ENST00000482996.5

VARS-225, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 728 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-225ENST00000482996 MYOGP15173 224 aa15.69■□□□□ 0.1
VARS-225ENST00000482996 SFNP31947 248 aa15.69■□□□□ 0.1
VARS-225ENST00000482996 TCTN1Q2MV58 587 aa15.69■□□□□ 0.1
VARS-225ENST00000482996 ZNF484Q5JVG2 852 aa15.69■□□□□ 0.1
VARS-225ENST00000482996 IER5Q5VY09 327 aa15.69■□□□□ 0.1
VARS-225ENST00000482996 NSUN7Q8NE18 718 aaKnown RBP15.69■□□□□ 0.1
VARS-225ENST00000482996 TRAPPC12Q8WVT3 735 aa15.69■□□□□ 0.1
VARS-225ENST00000482996 APBB2Q92870 758 aa15.69■□□□□ 0.1
VARS-225ENST00000482996 DISC1Q9NRI5 854 aa15.69■□□□□ 0.1
VARS-225ENST00000482996 GABBR1Q9UBS5 961 aa15.69■□□□□ 0.1
VARS-225ENST00000482996 PCDHA2Q9Y5H9 948 aa15.69■□□□□ 0.1
VARS-225ENST00000482996 COL1A2P08123 1366 aa15.69■□□□□ 0.1
VARS-225ENST00000482996 CHRNA1P02708 482 aa15.68■□□□□ 0.1
VARS-225ENST00000482996 AMHP03971 560 aa15.68■□□□□ 0.1
VARS-225ENST00000482996 CA3P07451 260 aa15.68■□□□□ 0.1
VARS-225ENST00000482996 FDPSP14324 419 aaKnown RBP15.68■□□□□ 0.1
VARS-225ENST00000482996 GCFC2P16383 781 aaKnown RBP15.68■□□□□ 0.1
VARS-225ENST00000482996 KRT2P35908 639 aa15.68■□□□□ 0.1
VARS-225ENST00000482996 JAK3P52333 1124 aa15.68■□□□□ 0.1
VARS-225ENST00000482996 DEFB103AP81534 67 aa15.68■□□□□ 0.1
VARS-225ENST00000482996 MRPS6P82932 125 aaKnown RBP15.68■□□□□ 0.1
VARS-225ENST00000482996 TRIM29Q14134 588 aa15.68■□□□□ 0.1
VARS-225ENST00000482996 LETM2Q2VYF4 491 aa15.68■□□□□ 0.1
VARS-225ENST00000482996 MTHFD1LQ6UB35 978 aa15.68■□□□□ 0.1
VARS-225ENST00000482996 NEK8Q86SG6 692 aa15.68■□□□□ 0.1
VARS-225ENST00000482996 SLC17A8Q8NDX2 589 aa15.68■□□□□ 0.1
VARS-225ENST00000482996 RDM1Q8NG50 284 aa15.68■□□□□ 0.1
VARS-225ENST00000482996 MAFAQ8NHW3 353 aaPredicted RBP15.68■□□□□ 0.1
VARS-225ENST00000482996 BBXQ8WY36 941 aaPredicted RBP15.68■□□□□ 0.1
VARS-225ENST00000482996 FAM167AQ96KS9 214 aa15.68■□□□□ 0.1
VARS-225ENST00000482996 MBOAT7Q96N66 472 aa15.68■□□□□ 0.1
VARS-225ENST00000482996 NAP1L4Q99733 375 aaKnown RBP15.68■□□□□ 0.1
VARS-225ENST00000482996 IFIH1Q9BYX4 1025 aaKnown RBP15.68■□□□□ 0.1
VARS-225ENST00000482996 PRDM12Q9H4Q4 367 aa15.68■□□□□ 0.1
VARS-225ENST00000482996 UPF2Q9HAU5 1272 aaKnown RBP15.68■□□□□ 0.1
VARS-225ENST00000482996 GJB4Q9NTQ9 266 aa15.68■□□□□ 0.1
VARS-225ENST00000482996 DDX25Q9UHL0 483 aaKnown RBP15.68■□□□□ 0.1
VARS-225ENST00000482996 MAFBQ9Y5Q3 323 aaPredicted RBP15.68■□□□□ 0.1
VARS-225ENST00000482996 CDY2AQ9Y6F7 541 aa15.68■□□□□ 0.1
VARS-225ENST00000482996 SMIM35A0A1B0GVV1 85 aa15.67■□□□□ 0.1
VARS-225ENST00000482996 CHMP2AO43633 222 aa15.67■□□□□ 0.1
VARS-225ENST00000482996 JAK2O60674 1132 aa15.67■□□□□ 0.1
VARS-225ENST00000482996 GHRP10912 638 aa15.67■□□□□ 0.1
VARS-225ENST00000482996 KLRC1P26715 233 aa15.67■□□□□ 0.1
VARS-225ENST00000482996 MGAT3Q09327 533 aa15.67■□□□□ 0.1
VARS-225ENST00000482996 PIK3AP1Q6ZUJ8 805 aa15.67■□□□□ 0.1
VARS-225ENST00000482996 MIER3Q7Z3K6 550 aa15.67■□□□□ 0.1
VARS-225ENST00000482996 MYOCDQ8IZQ8 938 aa15.67■□□□□ 0.1
VARS-225ENST00000482996 NME8Q8N427 588 aa15.67■□□□□ 0.1
VARS-225ENST00000482996 OXER1Q8TDS5 423 aa15.67■□□□□ 0.1
VARS-225ENST00000482996 ZBTB10Q96DT7 871 aa15.67■□□□□ 0.1
VARS-225ENST00000482996 ZSCAN31Q96LW9 406 aaPredicted RBP15.67■□□□□ 0.1
VARS-225ENST00000482996 RAD9AQ99638 391 aa15.67■□□□□ 0.1
VARS-225ENST00000482996 CEP131Q9UPN4 1083 aa15.67■□□□□ 0.1
VARS-225ENST00000482996 GBF1Q92538 1859 aa15.67■□□□□ 0.1
VARS-225ENST00000482996 PSMD10O75832 226 aa15.66■□□□□ 0.1
VARS-225ENST00000482996 GJB5O95377 273 aa15.66■□□□□ 0.1
VARS-225ENST00000482996 ATP4AP20648 1035 aa15.66■□□□□ 0.1
VARS-225ENST00000482996 FBXO47Q5MNV8 452 aa15.66■□□□□ 0.1
VARS-225ENST00000482996 PPP4R3AQ6IN85 833 aa15.66■□□□□ 0.1
VARS-225ENST00000482996 FAM117BQ6P1L5 589 aa15.66■□□□□ 0.1
VARS-225ENST00000482996 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.66■□□□□ 0.13e-7■□□□□ 9.7
VARS-225ENST00000482996 USP38Q8NB14 1042 aa15.66■□□□□ 0.1
VARS-225ENST00000482996 ETNPPLQ8TBG4 499 aa15.66■□□□□ 0.1
VARS-225ENST00000482996 UNC45AQ9H3U1 944 aa15.66■□□□□ 0.1
VARS-225ENST00000482996 SH2B1Q9NRF2 756 aaPredicted RBP15.66■□□□□ 0.1
VARS-225ENST00000482996 NRBP2Q9NSY0 501 aa15.66■□□□□ 0.1
VARS-225ENST00000482996 TRPV2Q9Y5S1 764 aa15.66■□□□□ 0.1
VARS-225ENST00000482996 SQORQ9Y6N5 450 aa15.66■□□□□ 0.1
VARS-225ENST00000482996 IGSF9BQ9UPX0 1349 aa15.66■□□□□ 0.1
VARS-225ENST00000482996 CHD7Q9P2D1 2997 aa15.66■□□□□ 0.1
VARS-225ENST00000482996 CDH23Q9H251 3354 aa15.66■□□□□ 0.1
VARS-225ENST00000482996 MYH9P35579 1960 aaKnown RBP15.66■□□□□ 0.1
VARS-225ENST00000482996 MARCH6O60337 910 aa15.65■□□□□ 0.1
VARS-225ENST00000482996 CCNT1O60563 726 aaKnown RBP15.65■□□□□ 0.1
VARS-225ENST00000482996 RBM25P49756 843 aaKnown RBP15.65■□□□□ 0.1
VARS-225ENST00000482996 LPIN1Q14693 890 aa15.65■□□□□ 0.1
VARS-225ENST00000482996 TSHZ1Q6ZSZ6 1077 aa15.65■□□□□ 0.1
VARS-225ENST00000482996 TRMT1LQ7Z2T5 733 aaKnown RBP15.65■□□□□ 0.1
VARS-225ENST00000482996 TMCO2Q7Z6W1 182 aaPredicted RBP15.65■□□□□ 0.1
VARS-225ENST00000482996 CCDC83Q8IWF9 413 aa15.65■□□□□ 0.1
VARS-225ENST00000482996 GJA10Q969M2 543 aa15.65■□□□□ 0.1
VARS-225ENST00000482996 FAM20AQ96MK3 541 aa15.65■□□□□ 0.1
VARS-225ENST00000482996 LLPHQ9BRT6 129 aaKnown RBP15.65■□□□□ 0.1
VARS-225ENST00000482996 OSBPL7Q9BZF2 842 aa15.65■□□□□ 0.1
VARS-225ENST00000482996 MAGEB2O15479 319 aa15.64■□□□□ 0.09
VARS-225ENST00000482996 SLC37A4O43826 429 aa15.64■□□□□ 0.09
VARS-225ENST00000482996 MMP1P03956 469 aa15.64■□□□□ 0.09
VARS-225ENST00000482996 OATP04181 439 aa15.64■□□□□ 0.09
VARS-225ENST00000482996 IGFBP4P22692 258 aa15.64■□□□□ 0.09
VARS-225ENST00000482996 FOSBP53539 338 aa15.64■□□□□ 0.09
VARS-225ENST00000482996 PRKCEQ02156 737 aa15.64■□□□□ 0.09
VARS-225ENST00000482996 TAP1Q03518 808 aa15.64■□□□□ 0.09
VARS-225ENST00000482996 TMEM62Q0P6H9 643 aa15.64■□□□□ 0.09
VARS-225ENST00000482996 NR5A1Q13285 461 aa15.64■□□□□ 0.09
VARS-225ENST00000482996 MKRN4PQ13434 485 aaPredicted RBP15.64■□□□□ 0.09
VARS-225ENST00000482996 RABEP1Q15276 862 aa15.64■□□□□ 0.09
VARS-225ENST00000482996 SAFBQ15424 915 aaKnown RBP eCLIP15.64■□□□□ 0.09
VARS-225ENST00000482996 KRT40Q6A162 431 aa15.64■□□□□ 0.09
VARS-225ENST00000482996 MICAL3Q7RTP6 2002 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms