RNA–Protein interactions for RNA: ENST00000482961.1

GTDC1-216, Transcript of glycosyltransferase like domain containing 1, humanhuman

TSL 1 (best)

Gene GTDC1, Length 140 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTDC1-216ENST00000482961 R3HDMLQ9H3Y0 253 aa3.78□□□□□ -1.8
GTDC1-216ENST00000482961 AGO3Q9H9G7 860 aaKnown RBP3.78□□□□□ -1.8
GTDC1-216ENST00000482961 RNF7Q9UBF6 113 aa3.78□□□□□ -1.8
GTDC1-216ENST00000482961 SLC26A4O43511 780 aa3.77□□□□□ -1.81
GTDC1-216ENST00000482961 ABHD16AO95870 558 aa3.77□□□□□ -1.81
GTDC1-216ENST00000482961 KCNJ6P48051 423 aa3.77□□□□□ -1.81
GTDC1-216ENST00000482961 MAN2A2P49641 1150 aa3.77□□□□□ -1.81
GTDC1-216ENST00000482961 CLK3P49761 638 aaKnown RBP3.77□□□□□ -1.81
GTDC1-216ENST00000482961 VHLLQ6RSH7 139 aa3.77□□□□□ -1.81
GTDC1-216ENST00000482961 ZNF276Q8N554 614 aa3.77□□□□□ -1.81
GTDC1-216ENST00000482961 KREMEN2Q8NCW0 462 aa3.77□□□□□ -1.81
GTDC1-216ENST00000482961 OR10A2Q9H208 303 aa3.77□□□□□ -1.81
GTDC1-216ENST00000482961 TOR3AQ9H497 397 aa3.77□□□□□ -1.81
GTDC1-216ENST00000482961 TESQ9UGI8 421 aaKnown RBP3.77□□□□□ -1.81
GTDC1-216ENST00000482961 CDC42EP3Q9UKI2 254 aa3.77□□□□□ -1.81
GTDC1-216ENST00000482961 COL4A3Q01955 1670 aa3.76□□□□□ -1.81
GTDC1-216ENST00000482961 GRID2IPA4D2P6 1211 aa3.76□□□□□ -1.81
GTDC1-216ENST00000482961 B3GALT2O43825 422 aa3.76□□□□□ -1.81
GTDC1-216ENST00000482961 POU3F3P20264 500 aaPredicted RBP3.76□□□□□ -1.81
GTDC1-216ENST00000482961 MRE11P49959 708 aa3.76□□□□□ -1.81
GTDC1-216ENST00000482961 MEOX1P50221 254 aa3.76□□□□□ -1.81
GTDC1-216ENST00000482961 ACBD5Q5T8D3 534 aaPredicted RBP3.76□□□□□ -1.81
GTDC1-216ENST00000482961 KCNV1Q6PIU1 500 aa3.76□□□□□ -1.81
GTDC1-216ENST00000482961 PNPLA5Q7Z6Z6 429 aaPredicted RBP3.76□□□□□ -1.81
GTDC1-216ENST00000482961 LENG9Q96B70 501 aa3.76□□□□□ -1.81
GTDC1-216ENST00000482961 MIEF2Q96C03 454 aa3.76□□□□□ -1.81
GTDC1-216ENST00000482961 CDIP1Q9H305 208 aa3.76□□□□□ -1.81
GTDC1-216ENST00000482961 FAM184BQ9ULE4 1060 aa3.76□□□□□ -1.81
GTDC1-216ENST00000482961 TELO2Q9Y4R8 837 aa3.76□□□□□ -1.81
GTDC1-216ENST00000482961 NUB1Q9Y5A7 615 aa3.76□□□□□ -1.81
GTDC1-216ENST00000482961 XDHP47989 1333 aa3.75□□□□□ -1.81
GTDC1-216ENST00000482961 SETD1BQ9UPS6 1966 aaKnown RBP3.75□□□□□ -1.81
GTDC1-216ENST00000482961 MYADML2A6NDP7 307 aa3.75□□□□□ -1.81
GTDC1-216ENST00000482961 TBX1O43435 398 aa3.75□□□□□ -1.81
GTDC1-216ENST00000482961 CPP00450 1065 aa3.75□□□□□ -1.81
GTDC1-216ENST00000482961 NAT2P11245 290 aa3.75□□□□□ -1.81
GTDC1-216ENST00000482961 COL6A2P12110 1019 aa3.75□□□□□ -1.81
GTDC1-216ENST00000482961 SF1Q15637 639 aaKnown RBP3.75□□□□□ -1.81
GTDC1-216ENST00000482961 FBXO42Q6P3S6 717 aa3.75□□□□□ -1.81
GTDC1-216ENST00000482961 RHOUQ7L0Q8 258 aa3.75□□□□□ -1.81
GTDC1-216ENST00000482961 OTOP3Q7RTS5 596 aa3.75□□□□□ -1.81
GTDC1-216ENST00000482961 RTKN2Q8IZC4 609 aa3.75□□□□□ -1.81
GTDC1-216ENST00000482961 C19orf47Q8N9M1 422 aaKnown RBP3.75□□□□□ -1.81
GTDC1-216ENST00000482961 C9orf106Q8NAJ2 232 aa3.75□□□□□ -1.81
GTDC1-216ENST00000482961 BEND2Q8NDZ0 799 aa3.75□□□□□ -1.81
GTDC1-216ENST00000482961 SCARB1Q8WTV0 552 aa3.75□□□□□ -1.81
GTDC1-216ENST00000482961 GPR87Q9BY21 358 aa3.75□□□□□ -1.81
GTDC1-216ENST00000482961 PDGFDQ9GZP0 370 aaPredicted RBP3.75□□□□□ -1.81
GTDC1-216ENST00000482961 CYP4F11Q9HBI6 524 aa3.75□□□□□ -1.81
GTDC1-216ENST00000482961 COL11A2P13942 1736 aaPredicted RBP3.75□□□□□ -1.81
GTDC1-216ENST00000482961 A0A1W2PRX2 142 aa3.74□□□□□ -1.81
GTDC1-216ENST00000482961 ACOT7O00154 380 aa3.74□□□□□ -1.81
GTDC1-216ENST00000482961 EIF6P56537 245 aaKnown RBP3.74□□□□□ -1.81
GTDC1-216ENST00000482961 MAPK7Q13164 816 aa3.74□□□□□ -1.81
GTDC1-216ENST00000482961 RIN1Q13671 783 aa3.74□□□□□ -1.81
GTDC1-216ENST00000482961 TESK1Q15569 626 aa3.74□□□□□ -1.81
GTDC1-216ENST00000482961 RABL3Q5HYI8 236 aa3.74□□□□□ -1.81
GTDC1-216ENST00000482961 OTOP2Q7RTS6 562 aa3.74□□□□□ -1.81
GTDC1-216ENST00000482961 ZC3H7AQ8IWR0 971 aaKnown RBP3.74□□□□□ -1.81
GTDC1-216ENST00000482961 PPARGC1AQ9UBK2 798 aaKnown RBP3.74□□□□□ -1.81
GTDC1-216ENST00000482961 FBXO10Q9UK96 956 aa3.74□□□□□ -1.81
GTDC1-216ENST00000482961 FZD1Q9UP38 647 aa3.74□□□□□ -1.81
GTDC1-216ENST00000482961 SCG5P05408 212 aa3.73□□□□□ -1.81
GTDC1-216ENST00000482961 ITGB1P05556 798 aa3.73□□□□□ -1.81
GTDC1-216ENST00000482961 ZNF143P52747 638 aaPredicted RBP3.73□□□□□ -1.81
GTDC1-216ENST00000482961 HGFACQ04756 655 aa3.73□□□□□ -1.81
GTDC1-216ENST00000482961 EIF4HQ15056 248 aaKnown RBP3.73□□□□□ -1.81
GTDC1-216ENST00000482961 NBPF6Q5VWK0 638 aa3.73□□□□□ -1.81
GTDC1-216ENST00000482961 GRASPQ7Z6J2 395 aaPredicted RBP3.73□□□□□ -1.81
GTDC1-216ENST00000482961 ZNF366Q8N895 744 aa3.73□□□□□ -1.81
GTDC1-216ENST00000482961 UHMK1Q8TAS1 419 aaKnown RBP3.73□□□□□ -1.81
GTDC1-216ENST00000482961 SMG7Q92540 1137 aaKnown RBP3.73□□□□□ -1.81
GTDC1-216ENST00000482961 NBPF4Q96M43 638 aa3.73□□□□□ -1.81
GTDC1-216ENST00000482961 PRDM13Q9H4Q3 707 aa3.73□□□□□ -1.81
GTDC1-216ENST00000482961 ARHGAP28Q9P2N2 729 aa3.73□□□□□ -1.81
GTDC1-216ENST00000482961 NKRFO15226 690 aaKnown RBP eCLIP3.72□□□□□ -1.81
GTDC1-216ENST00000482961 GNAT1P11488 350 aa3.72□□□□□ -1.81
GTDC1-216ENST00000482961 IL13RA1P78552 427 aa3.72□□□□□ -1.81
GTDC1-216ENST00000482961 SPIRE1Q08AE8 756 aa3.72□□□□□ -1.81
GTDC1-216ENST00000482961 DBPQ10586 325 aaPredicted RBP3.72□□□□□ -1.81
GTDC1-216ENST00000482961 TRIM68Q6AZZ1 485 aa3.72□□□□□ -1.81
GTDC1-216ENST00000482961 DENND5AQ6IQ26 1287 aa3.72□□□□□ -1.81
GTDC1-216ENST00000482961 KCTD1Q719H9 257 aa3.72□□□□□ -1.81
GTDC1-216ENST00000482961 THAP3Q8WTV1 239 aaPredicted RBP3.72□□□□□ -1.81
GTDC1-216ENST00000482961 PGBD4Q96DM1 585 aa3.72□□□□□ -1.81
GTDC1-216ENST00000482961 CCDC140Q96MF4 163 aa3.72□□□□□ -1.81
GTDC1-216ENST00000482961 LRP2BPQ9P2M1 347 aa3.72□□□□□ -1.81
GTDC1-216ENST00000482961 DSEQ9UL01 958 aa3.72□□□□□ -1.81
GTDC1-216ENST00000482961 FRMD4BQ9Y2L6 1034 aa3.72□□□□□ -1.81
GTDC1-216ENST00000482961 PMS2P1A4D2B8 440 aa3.71□□□□□ -1.82
GTDC1-216ENST00000482961 HOXB6P17509 224 aaKnown RBP3.71□□□□□ -1.82
GTDC1-216ENST00000482961 NR4A1P22736 598 aa3.71□□□□□ -1.82
GTDC1-216ENST00000482961 STAT3P40763 770 aa3.71□□□□□ -1.82
GTDC1-216ENST00000482961 GIPRP48546 466 aa3.71□□□□□ -1.82
GTDC1-216ENST00000482961 ELAVL1Q15717 326 aaKnown RBP3.71□□□□□ -1.82
GTDC1-216ENST00000482961 LRRC55Q6ZSA7 311 aa3.71□□□□□ -1.82
GTDC1-216ENST00000482961 CXXC5Q7LFL8 322 aaKnown RBP3.71□□□□□ -1.82
GTDC1-216ENST00000482961 TMEM145Q8NBT3 493 aa3.71□□□□□ -1.82
GTDC1-216ENST00000482961 NELL1Q92832 810 aa3.71□□□□□ -1.82
GTDC1-216ENST00000482961 KCNJ15Q99712 375 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms