RNA–Protein interactions for RNA: ENST00000481812.4

VPS16-207, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS16, Length 943 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-207ENST00000481812 NRBP2Q9NSY0 501 aa23.2■■□□□ 1.3
VPS16-207ENST00000481812 CCDC39Q9UFE4 941 aa23.2■■□□□ 1.3
VPS16-207ENST00000481812 GOLGA6L22H0YM25 854 aa23.19■■□□□ 1.3
VPS16-207ENST00000481812 HBP1O60381 514 aa23.19■■□□□ 1.3
VPS16-207ENST00000481812 STBD1O95210 358 aa23.19■■□□□ 1.3
VPS16-207ENST00000481812 MYCNP04198 464 aaPredicted RBP23.19■■□□□ 1.3
VPS16-207ENST00000481812 PSEN2P49810 448 aa23.19■■□□□ 1.3
VPS16-207ENST00000481812 MNX1P50219 401 aaPredicted RBP23.19■■□□□ 1.3
VPS16-207ENST00000481812 GRB10Q13322 594 aa23.19■■□□□ 1.3
VPS16-207ENST00000481812 MFSD10Q14728 455 aa23.19■■□□□ 1.3
VPS16-207ENST00000481812 PLCB4Q15147 1175 aa23.19■■□□□ 1.3
VPS16-207ENST00000481812 TMEM119Q4V9L6 283 aa23.19■■□□□ 1.3
VPS16-207ENST00000481812 ATP8B4Q8TF62 1192 aa23.19■■□□□ 1.3
VPS16-207ENST00000481812 CDK5RAP3Q96JB5 506 aa23.19■■□□□ 1.3
VPS16-207ENST00000481812 GLT1D1Q96MS3 346 aa23.19■■□□□ 1.3
VPS16-207ENST00000481812 PYM1Q9BRP8 204 aaKnown RBP23.19■■□□□ 1.3
VPS16-207ENST00000481812 WRAP73Q9P2S5 460 aaPredicted RBP23.19■■□□□ 1.3
VPS16-207ENST00000481812 POTEB3A0JP26 581 aa23.18■■□□□ 1.3
VPS16-207ENST00000481812 OATP04181 439 aa23.18■■□□□ 1.3
VPS16-207ENST00000481812 PRKCEQ02156 737 aa23.18■■□□□ 1.3
VPS16-207ENST00000481812 ECM1Q16610 540 aa23.18■■□□□ 1.3
VPS16-207ENST00000481812 KIAA0753Q2KHM9 967 aa23.18■■□□□ 1.3
VPS16-207ENST00000481812 POTEBQ6S5H4 581 aa23.18■■□□□ 1.3
VPS16-207ENST00000481812 OTUD6AQ7L8S5 288 aa23.18■■□□□ 1.3
VPS16-207ENST00000481812 ABHD8Q96I13 439 aa23.18■■□□□ 1.3
VPS16-207ENST00000481812 PNMA5Q96PV4 448 aa23.18■■□□□ 1.3
VPS16-207ENST00000481812 NIFKQ9BYG3 293 aaKnown RBP23.18■■□□□ 1.3
VPS16-207ENST00000481812 ANKEF1Q9NU02 776 aa23.18■■□□□ 1.3
VPS16-207ENST00000481812 KIAA1024Q9UPX6 916 aa23.18■■□□□ 1.3
VPS16-207ENST00000481812 PPME1Q9Y570 386 aa23.18■■□□□ 1.3
VPS16-207ENST00000481812 A0A1W2PQ45 241 aaPredicted RBP23.17■■□□□ 1.3
VPS16-207ENST00000481812 A0A1W2PQY0 241 aa23.17■■□□□ 1.3
VPS16-207ENST00000481812 UBE2HP62256 183 aa23.17■■□□□ 1.3
VPS16-207ENST00000481812 CCDC73Q6ZRK6 1079 aa23.17■■□□□ 1.3
VPS16-207ENST00000481812 SESTD1Q86VW0 696 aa23.17■■□□□ 1.3
VPS16-207ENST00000481812 CKAP2LQ8IYA6 745 aa23.17■■□□□ 1.3
VPS16-207ENST00000481812 MRPS27Q92552 414 aaKnown RBP23.17■■□□□ 1.3
VPS16-207ENST00000481812 RNPEPQ9H4A4 650 aa23.17■■□□□ 1.3
VPS16-207ENST00000481812 DDX19AQ9NUU7 478 aaKnown RBP23.17■■□□□ 1.3
VPS16-207ENST00000481812 DBR1Q9UK59 544 aaKnown RBP23.17■■□□□ 1.3
VPS16-207ENST00000481812 HPSEQ9Y251 543 aa23.17■■□□□ 1.3
VPS16-207ENST00000481812 COL1A2P08123 1366 aa23.16■■□□□ 1.3
VPS16-207ENST00000481812 BRCA2P51587 3418 aa23.16■■□□□ 1.3
VPS16-207ENST00000481812 COL6A1P12109 1028 aa23.16■■□□□ 1.3
VPS16-207ENST00000481812 YWHABP31946 246 aaKnown RBP23.16■■□□□ 1.3
VPS16-207ENST00000481812 PTPN11Q06124 597 aaPredicted RBP23.16■■□□□ 1.3
VPS16-207ENST00000481812 KARSQ15046 597 aaKnown RBP23.16■■□□□ 1.3
VPS16-207ENST00000481812 NFRKBQ6P4R8 1299 aa23.16■■□□□ 1.3
VPS16-207ENST00000481812 POTEGQ6S5H5 508 aa23.16■■□□□ 1.3
VPS16-207ENST00000481812 STK17AQ9UEE5 414 aa23.16■■□□□ 1.3
VPS16-207ENST00000481812 KCNH3Q9ULD8 1083 aa23.16■■□□□ 1.3
VPS16-207ENST00000481812 DNM3Q9UQ16 869 aa23.16■■□□□ 1.3
VPS16-207ENST00000481812 ARID2Q68CP9 1835 aa23.15■■□□□ 1.3
VPS16-207ENST00000481812 PRPF40AO75400 957 aaKnown RBP23.15■■□□□ 1.3
VPS16-207ENST00000481812 PLCG1P19174 1290 aa23.15■■□□□ 1.3
VPS16-207ENST00000481812 MARK3P27448 753 aa23.15■■□□□ 1.3
VPS16-207ENST00000481812 NBPF20Q3BBV1 942 aa23.15■■□□□ 1.3
VPS16-207ENST00000481812 ZNF484Q5JVG2 852 aa23.15■■□□□ 1.3
VPS16-207ENST00000481812 RRAGBQ5VZM2 374 aa23.15■■□□□ 1.3
VPS16-207ENST00000481812 ANO5Q75V66 913 aa23.15■■□□□ 1.3
VPS16-207ENST00000481812 FSIP1Q8NA03 581 aa23.15■■□□□ 1.3
VPS16-207ENST00000481812 SLC43A3Q8NBI5 491 aa23.15■■□□□ 1.3
VPS16-207ENST00000481812 RASSF8Q8NHQ8 419 aa23.15■■□□□ 1.3
VPS16-207ENST00000481812 CUEDC2Q9H467 287 aa23.15■■□□□ 1.3
VPS16-207ENST00000481812 STARD7Q9NQZ5 370 aa23.15■■□□□ 1.3
VPS16-207ENST00000481812 NRCAMQ92823 1304 aa23.14■■□□□ 1.3
VPS16-207ENST00000481812 A0A0U1RQG5 324 aaPredicted RBP23.14■■□□□ 1.29
VPS16-207ENST00000481812 A0A1B0GVL5 298 aa23.14■■□□□ 1.29
VPS16-207ENST00000481812 RRN3P2A6NIE6 340 aa23.14■■□□□ 1.29
VPS16-207ENST00000481812 DDX11L8A8MPP1 907 aa23.14■■□□□ 1.29
VPS16-207ENST00000481812 EYA4O95677 639 aa23.14■■□□□ 1.29
VPS16-207ENST00000481812 PFKFB1P16118 471 aa23.14■■□□□ 1.29
VPS16-207ENST00000481812 HOXC8P31273 242 aa23.14■■□□□ 1.29
VPS16-207ENST00000481812 ITGA7Q13683 1181 aa23.14■■□□□ 1.29
VPS16-207ENST00000481812 TARBP2Q15633 366 aaKnown RBP23.14■■□□□ 1.29
VPS16-207ENST00000481812 IQUBQ8NA54 791 aa23.14■■□□□ 1.29
VPS16-207ENST00000481812 LMBRD1Q9NUN5 540 aa23.14■■□□□ 1.29
VPS16-207ENST00000481812 USP25Q9UHP3 1055 aa23.14■■□□□ 1.29
VPS16-207ENST00000481812 TRPC6Q9Y210 931 aa23.14■■□□□ 1.29
VPS16-207ENST00000481812 GRIN2DO15399 1336 aa23.13■■□□□ 1.29
VPS16-207ENST00000481812 A0A087X0B3 334 aa23.13■■□□□ 1.29
VPS16-207ENST00000481812 GADD45BO75293 160 aaPredicted RBP23.13■■□□□ 1.29
VPS16-207ENST00000481812 GNAT1P11488 350 aa23.13■■□□□ 1.29
VPS16-207ENST00000481812 PSMC6P62333 389 aa23.13■■□□□ 1.29
VPS16-207ENST00000481812 ZRSR1Q15695 479 aaKnown RBP23.13■■□□□ 1.29
VPS16-207ENST00000481812 E2F4Q16254 413 aa23.13■■□□□ 1.29
VPS16-207ENST00000481812 EXOC8Q8IYI6 725 aa23.13■■□□□ 1.29
VPS16-207ENST00000481812 TNS4Q8IZW8 715 aa23.13■■□□□ 1.29
VPS16-207ENST00000481812 PIGOQ8TEQ8 1089 aa23.13■■□□□ 1.29
VPS16-207ENST00000481812 VTI1AQ96AJ9 217 aa23.13■■□□□ 1.29
VPS16-207ENST00000481812 SEPT9Q9UHD8 586 aaPredicted RBP23.13■■□□□ 1.29
VPS16-207ENST00000481812 POLR2DO15514 142 aaKnown RBP23.12■■□□□ 1.29
VPS16-207ENST00000481812 SMIM10L2AP0DMW4 78 aa23.12■■□□□ 1.29
VPS16-207ENST00000481812 SMIM10L2BP0DMW5 78 aa23.12■■□□□ 1.29
VPS16-207ENST00000481812 INSRRP14616 1297 aa23.12■■□□□ 1.29
VPS16-207ENST00000481812 SYKP43405 635 aa23.12■■□□□ 1.29
VPS16-207ENST00000481812 RARRES1P49788 294 aa23.12■■□□□ 1.29
VPS16-207ENST00000481812 NDUFA8P51970 172 aa23.12■■□□□ 1.29
VPS16-207ENST00000481812 ADAM17P78536 824 aa23.12■■□□□ 1.29
VPS16-207ENST00000481812 PPFIA1Q13136 1202 aa23.12■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms