RNA–Protein interactions for RNA: ENST00000481690.2

GPCPD1-206, Transcript of glycerophosphocholine phosphodiesterase 1, humanhuman

TSL 3

Gene GPCPD1, Length 819 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPCPD1-206ENST00000481690 TMEM62Q0P6H9 643 aa25.23■■□□□ 1.63
GPCPD1-206ENST00000481690 TRIM22Q8IYM9 498 aa25.23■■□□□ 1.63
GPCPD1-206ENST00000481690 TCEAL9Q9UHQ7 104 aa25.23■■□□□ 1.63
GPCPD1-206ENST00000481690 RALGAPA2Q2PPJ7 1873 aa25.23■■□□□ 1.63
GPCPD1-206ENST00000481690 CPLX1O14810 134 aa25.22■■□□□ 1.63
GPCPD1-206ENST00000481690 RPLP2P05387 115 aaKnown RBP25.22■■□□□ 1.63
GPCPD1-206ENST00000481690 SLC26A2P50443 739 aa25.22■■□□□ 1.63
GPCPD1-206ENST00000481690 TFF2Q03403 129 aa25.22■■□□□ 1.63
GPCPD1-206ENST00000481690 PRR16Q569H4 304 aa25.22■■□□□ 1.63
GPCPD1-206ENST00000481690 FBXO47Q5MNV8 452 aa25.22■■□□□ 1.63
GPCPD1-206ENST00000481690 IER5Q5VY09 327 aa25.22■■□□□ 1.63
GPCPD1-206ENST00000481690 MIS18BP1Q6P0N0 1132 aa25.22■■□□□ 1.63
GPCPD1-206ENST00000481690 ABHD15Q6UXT9 468 aa25.22■■□□□ 1.63
GPCPD1-206ENST00000481690 CCDC60Q8IWA6 550 aaPredicted RBP25.22■■□□□ 1.63
GPCPD1-206ENST00000481690 FBXO22Q8NEZ5 403 aa25.22■■□□□ 1.63
GPCPD1-206ENST00000481690 SP7Q8TDD2 431 aaPredicted RBP25.22■■□□□ 1.63
GPCPD1-206ENST00000481690 ZNF302Q9NR11 478 aa25.22■■□□□ 1.63
GPCPD1-206ENST00000481690 PCDHA2Q9Y5H9 948 aa25.22■■□□□ 1.63
GPCPD1-206ENST00000481690 IGKV6D-21A0A0A0MT36 114 aa25.21■■□□□ 1.63
GPCPD1-206ENST00000481690 DHX15O43143 795 aaKnown RBP25.21■■□□□ 1.63
GPCPD1-206ENST00000481690 NLRP5P59047 1200 aa25.21■■□□□ 1.63
GPCPD1-206ENST00000481690 SSRP1Q08945 709 aaKnown RBP25.21■■□□□ 1.63
GPCPD1-206ENST00000481690 STK3Q13188 491 aa25.21■■□□□ 1.63
GPCPD1-206ENST00000481690 PDXDC2PQ6P474 469 aa25.21■■□□□ 1.63
GPCPD1-206ENST00000481690 TSHZ1Q6ZSZ6 1077 aa25.21■■□□□ 1.63
GPCPD1-206ENST00000481690 TRPV2Q9Y5S1 764 aa25.21■■□□□ 1.63
GPCPD1-206ENST00000481690 SWSAP1Q6NVH7 229 aa25.2■■□□□ 1.62
GPCPD1-206ENST00000481690 MTHFD1LQ6UB35 978 aa25.2■■□□□ 1.62
GPCPD1-206ENST00000481690 CKAP2LQ8IYA6 745 aa25.2■■□□□ 1.62
GPCPD1-206ENST00000481690 ADAMTS19Q8TE59 1207 aa25.2■■□□□ 1.62
GPCPD1-206ENST00000481690 ATP8B4Q8TF62 1192 aa25.2■■□□□ 1.62
GPCPD1-206ENST00000481690 TM6SF1Q9BZW5 370 aa25.2■■□□□ 1.62
GPCPD1-206ENST00000481690 TBC1D22BQ9NU19 505 aa25.2■■□□□ 1.62
GPCPD1-206ENST00000481690 PDRG1Q9NUG6 133 aa25.2■■□□□ 1.62
GPCPD1-206ENST00000481690 COL4A6Q14031 1691 aa25.2■■□□□ 1.62
GPCPD1-206ENST00000481690 TTC28Q96AY4 2481 aa25.19■■□□□ 1.62
GPCPD1-206ENST00000481690 HBP1O60381 514 aa25.19■■□□□ 1.62
GPCPD1-206ENST00000481690 CD52P31358 61 aa25.19■■□□□ 1.62
GPCPD1-206ENST00000481690 AAK1Q2M2I8 961 aa25.19■■□□□ 1.62
GPCPD1-206ENST00000481690 AGO3Q9H9G7 860 aaKnown RBP25.19■■□□□ 1.62
GPCPD1-206ENST00000481690 SH3GLB2Q9NR46 395 aa25.19■■□□□ 1.62
GPCPD1-206ENST00000481690 PPP4R2Q9NY27 417 aa25.19■■□□□ 1.62
GPCPD1-206ENST00000481690 LMCD1Q9NZU5 365 aa25.19■■□□□ 1.62
GPCPD1-206ENST00000481690 REV3LO60673 3130 aa25.19■■□□□ 1.62
GPCPD1-206ENST00000481690 KLRC1P26715 233 aa25.18■■□□□ 1.62
GPCPD1-206ENST00000481690 ZNF746Q6NUN9 644 aaPredicted RBP25.18■■□□□ 1.62
GPCPD1-206ENST00000481690 TRMT1LQ7Z2T5 733 aaKnown RBP25.18■■□□□ 1.62
GPCPD1-206ENST00000481690 ZNF274Q96GC6 653 aaPredicted RBP25.18■■□□□ 1.62
GPCPD1-206ENST00000481690 SAMM50Q9Y512 469 aa25.18■■□□□ 1.62
GPCPD1-206ENST00000481690 VCANP13611 3396 aa25.18■■□□□ 1.62
GPCPD1-206ENST00000481690 TTC3P53804 2025 aa25.18■■□□□ 1.62
GPCPD1-206ENST00000481690 SMIM35A0A1B0GVV1 85 aa25.17■■□□□ 1.62
GPCPD1-206ENST00000481690 CIITAP33076 1130 aa25.17■■□□□ 1.62
GPCPD1-206ENST00000481690 KRT76Q01546 638 aa25.17■■□□□ 1.62
GPCPD1-206ENST00000481690 EPC2Q52LR7 807 aa25.17■■□□□ 1.62
GPCPD1-206ENST00000481690 CPLX2Q6PUV4 134 aaKnown RBP25.17■■□□□ 1.62
GPCPD1-206ENST00000481690 IL17RAQ96F46 866 aa25.17■■□□□ 1.62
GPCPD1-206ENST00000481690 SAMD11Q96NU1 681 aa25.17■■□□□ 1.62
GPCPD1-206ENST00000481690 CELF4Q9BZC1 486 aaKnown RBP25.17■■□□□ 1.62
GPCPD1-206ENST00000481690 COG5Q9UP83 839 aa25.17■■□□□ 1.62
GPCPD1-206ENST00000481690 GINS2Q9Y248 185 aa25.17■■□□□ 1.62
GPCPD1-206ENST00000481690 COL1A2P08123 1366 aa25.17■■□□□ 1.62
GPCPD1-206ENST00000481690 ENPP3O14638 875 aa25.16■■□□□ 1.62
GPCPD1-206ENST00000481690 DEXIO95424 95 aa25.16■■□□□ 1.62
GPCPD1-206ENST00000481690 PSAPP07602 524 aa25.16■■□□□ 1.62
GPCPD1-206ENST00000481690 KCNQ1P51787 676 aa25.16■■□□□ 1.62
GPCPD1-206ENST00000481690 SMAP1Q8IYB5 467 aaPredicted RBP25.16■■□□□ 1.62
GPCPD1-206ENST00000481690 TNFRSF10AO00220 468 aa25.15■■□□□ 1.62
GPCPD1-206ENST00000481690 ATP4AP20648 1035 aa25.15■■□□□ 1.62
GPCPD1-206ENST00000481690 PAK2Q13177 524 aa25.15■■□□□ 1.62
GPCPD1-206ENST00000481690 ZNF484Q5JVG2 852 aa25.15■■□□□ 1.62
GPCPD1-206ENST00000481690 TMEM192Q8IY95 271 aa25.15■■□□□ 1.62
GPCPD1-206ENST00000481690 NME8Q8N427 588 aa25.15■■□□□ 1.62
GPCPD1-206ENST00000481690 FIBCD1Q8N539 461 aa25.15■■□□□ 1.62
GPCPD1-206ENST00000481690 HLA-CQ95604 372 aa25.15■■□□□ 1.62
GPCPD1-206ENST00000481690 LENG9Q96B70 501 aa25.15■■□□□ 1.62
GPCPD1-206ENST00000481690 UHRF1Q96T88 793 aaPredicted RBP25.15■■□□□ 1.62
GPCPD1-206ENST00000481690 GABBR1Q9UBS5 961 aa25.15■■□□□ 1.62
GPCPD1-206ENST00000481690 PCDHA4Q9UN74 947 aa25.15■■□□□ 1.62
GPCPD1-206ENST00000481690 PCDHA10Q9Y5I2 948 aa25.15■■□□□ 1.62
GPCPD1-206ENST00000481690 ADGRA3Q8IWK6 1321 aa25.14■■□□□ 1.62
GPCPD1-206ENST00000481690 IGSF9BQ9UPX0 1349 aa25.14■■□□□ 1.62
GPCPD1-206ENST00000481690 TBCKQ8TEA7 893 aa25.14■■□□□ 1.62
GPCPD1-206ENST00000481690 LINC01599Q8WXQ3 324 aa25.14■■□□□ 1.62
GPCPD1-206ENST00000481690 BBXQ8WY36 941 aaPredicted RBP25.14■■□□□ 1.62
GPCPD1-206ENST00000481690 AIFM3Q96NN9 605 aa25.14■■□□□ 1.62
GPCPD1-206ENST00000481690 PADI3Q9ULW8 664 aa25.14■■□□□ 1.62
GPCPD1-206ENST00000481690 SQORQ9Y6N5 450 aa25.14■■□□□ 1.62
GPCPD1-206ENST00000481690 MSH4O15457 936 aa25.13■■□□□ 1.61
GPCPD1-206ENST00000481690 CHMP2AO43633 222 aa25.13■■□□□ 1.61
GPCPD1-206ENST00000481690 CTNNB1P35222 781 aa25.13■■□□□ 1.61
GPCPD1-206ENST00000481690 USP11P51784 963 aa25.13■■□□□ 1.61
GPCPD1-206ENST00000481690 GPM6BQ13491 265 aa25.13■■□□□ 1.61
GPCPD1-206ENST00000481690 PPP1R16BQ96T49 567 aa25.13■■□□□ 1.61
GPCPD1-206ENST00000481690 FTHL17Q9BXU8 183 aa25.13■■□□□ 1.61
GPCPD1-206ENST00000481690 C22orf23Q9BZE7 217 aa25.13■■□□□ 1.61
GPCPD1-206ENST00000481690 MAFBQ9Y5Q3 323 aaPredicted RBP25.13■■□□□ 1.61
GPCPD1-206ENST00000481690 KIAA1671Q9BY89 1806 aa25.13■■□□□ 1.61
GPCPD1-206ENST00000481690 KDM3AQ9Y4C1 1321 aa25.12■■□□□ 1.61
GPCPD1-206ENST00000481690 ATG2AQ2TAZ0 1938 aa25.12■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms