RNA–Protein interactions for RNA: ENST00000481194.1

CCM2-214, Transcript of CCM2 scaffold protein, humanhuman

TSL 1 (best)

Gene CCM2, Length 5,304 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-214ENST00000481194 RFC5P40937 340 aa21.02■□□□□ 0.95
CCM2-214ENST00000481194 MAPK6Q16659 721 aa21.02■□□□□ 0.95
CCM2-214ENST00000481194 PPM1KQ8N3J5 372 aa21.02■□□□□ 0.95
CCM2-214ENST00000481194 MAIP1Q8WWC4 291 aa21.02■□□□□ 0.95
CCM2-214ENST00000481194 CICQ96RK0 1608 aaPredicted RBP21.01■□□□□ 0.95
CCM2-214ENST00000481194 DGAT1O75907 488 aa21.01■□□□□ 0.95
CCM2-214ENST00000481194 SEPT1Q8WYJ6 367 aa21.01■□□□□ 0.95
CCM2-214ENST00000481194 DAAM1Q9Y4D1 1078 aa21.01■□□□□ 0.95
CCM2-214ENST00000481194 PTK2Q05397 1052 aa21.01■□□□□ 0.95
CCM2-214ENST00000481194 FAM193BQ96PV7 902 aaPredicted RBP21.01■□□□□ 0.95
CCM2-214ENST00000481194 SMARCAD1Q9H4L7 1026 aa21.01■□□□□ 0.95
CCM2-214ENST00000481194 RPA1P27694 616 aa21.01■□□□□ 0.95
CCM2-214ENST00000481194 MXI1P50539 228 aa21.01■□□□□ 0.95
CCM2-214ENST00000481194 EFNA5P52803 228 aa21.01■□□□□ 0.95
CCM2-214ENST00000481194 ZBED6P86452 979 aa21.01■□□□□ 0.95
CCM2-214ENST00000481194 PROCA1Q8NCQ7 364 aaPredicted RBP21.01■□□□□ 0.95
CCM2-214ENST00000481194 BBXQ8WY36 941 aaPredicted RBP21.01■□□□□ 0.95
CCM2-214ENST00000481194 MAK16Q9BXY0 300 aaKnown RBP21.01■□□□□ 0.95
CCM2-214ENST00000481194 TRIM9Q9C026 710 aa21.01■□□□□ 0.95
CCM2-214ENST00000481194 CENPHQ9H3R5 247 aa21.01■□□□□ 0.95
CCM2-214ENST00000481194 UBE2Q2LH0YL09 131 aa21.01■□□□□ 0.95
CCM2-214ENST00000481194 NEFHP12036 1026 aa21.01■□□□□ 0.95
CCM2-214ENST00000481194 SKIDA1Q1XH10 827 aa21.01■□□□□ 0.95
CCM2-214ENST00000481194 CCDC26Q8TAB7 109 aa21.01■□□□□ 0.95
CCM2-214ENST00000481194 U2AF1L4Q8WU68 220 aaKnown RBP21.01■□□□□ 0.95
CCM2-214ENST00000481194 CCDC94Q9BW85 323 aaPredicted RBP21.01■□□□□ 0.95
CCM2-214ENST00000481194 MOV10L1Q9BXT6 1211 aaKnown RBP21.01■□□□□ 0.95
CCM2-214ENST00000481194 RPF1Q9H9Y2 349 aaKnown RBP21.01■□□□□ 0.95
CCM2-214ENST00000481194 RNF216Q9NWF9 866 aaPredicted RBP21.01■□□□□ 0.95
CCM2-214ENST00000481194 NR3C1P04150 777 aa21■□□□□ 0.95
CCM2-214ENST00000481194 PRCPP42785 496 aa21■□□□□ 0.95
CCM2-214ENST00000481194 STAT5BP51692 787 aa21■□□□□ 0.95
CCM2-214ENST00000481194 RPS6P62753 249 aaKnown RBP21■□□□□ 0.95
CCM2-214ENST00000481194 KRT31Q15323 416 aa21■□□□□ 0.95
CCM2-214ENST00000481194 ZNF746Q6NUN9 644 aaPredicted RBP21■□□□□ 0.95
CCM2-214ENST00000481194 CEP128Q6ZU80 1094 aa21■□□□□ 0.95
CCM2-214ENST00000481194 METTL16Q86W50 562 aaKnown RBP21■□□□□ 0.95
CCM2-214ENST00000481194 KATNAL1Q9BW62 490 aa21■□□□□ 0.95
CCM2-214ENST00000481194 NUP188Q5SRE5 1749 aa21■□□□□ 0.95
CCM2-214ENST00000481194 PITPNM2Q9BZ72 1349 aa21■□□□□ 0.95
CCM2-214ENST00000481194 DPYDQ12882 1025 aa21■□□□□ 0.95
CCM2-214ENST00000481194 DCUN1D2Q6PH85 259 aa21■□□□□ 0.95
CCM2-214ENST00000481194 XXYLT1Q8NBI6 393 aa21■□□□□ 0.95
CCM2-214ENST00000481194 POLR2BP30876 1174 aaKnown RBP21■□□□□ 0.95
CCM2-214ENST00000481194 GJC1P36383 396 aa21■□□□□ 0.95
CCM2-214ENST00000481194 C10orf76Q5T2E6 689 aa21■□□□□ 0.95
CCM2-214ENST00000481194 PANX2Q96RD6 677 aa21■□□□□ 0.95
CCM2-214ENST00000481194 POLR3FQ9H1D9 316 aaPredicted RBP21■□□□□ 0.95
CCM2-214ENST00000481194 PTPAQ15257 358 aa21■□□□□ 0.95
CCM2-214ENST00000481194 ANKEF1Q9NU02 776 aa21■□□□□ 0.95
CCM2-214ENST00000481194 CASP14P31944 242 aa20.99■□□□□ 0.95
CCM2-214ENST00000481194 SNRPFP62306 86 aaKnown RBP20.99■□□□□ 0.95
CCM2-214ENST00000481194 PCNX4Q63HM2 1172 aa20.99■□□□□ 0.95
CCM2-214ENST00000481194 SCFD2Q8WU76 684 aa20.99■□□□□ 0.95
CCM2-214ENST00000481194 NDC80O14777 642 aa20.99■□□□□ 0.95
CCM2-214ENST00000481194 DNERQ8NFT8 737 aa20.99■□□□□ 0.95
CCM2-214ENST00000481194 RHOBTB3O94955 611 aa20.99■□□□□ 0.95
CCM2-214ENST00000481194 GCNT4Q9P109 453 aa20.99■□□□□ 0.95
CCM2-214ENST00000481194 ATP2A1O14983 1001 aa20.99■□□□□ 0.95
CCM2-214ENST00000481194 MAPK4P31152 587 aa20.99■□□□□ 0.95
CCM2-214ENST00000481194 CCDC170Q8IYT3 715 aa20.99■□□□□ 0.95
CCM2-214ENST00000481194 PCIF1Q9H4Z3 704 aa20.99■□□□□ 0.95
CCM2-214ENST00000481194 TUBE1Q9UJT0 475 aa20.99■□□□□ 0.95
CCM2-214ENST00000481194 LGALS16A8MUM7 142 aa20.98■□□□□ 0.95
CCM2-214ENST00000481194 TATDN1Q6P1N9 297 aa20.98■□□□□ 0.95
CCM2-214ENST00000481194 OR6J1Q8NGC5 347 aa20.98■□□□□ 0.95
CCM2-214ENST00000481194 OPTNQ96CV9 577 aa20.98■□□□□ 0.95
CCM2-214ENST00000481194 CDCA5Q96FF9 252 aa20.98■□□□□ 0.95
CCM2-214ENST00000481194 HESX1Q9UBX0 185 aa20.98■□□□□ 0.95
CCM2-214ENST00000481194 GGPS1O95749 300 aa20.98■□□□□ 0.95
CCM2-214ENST00000481194 LEKR1Q6ZMV7 388 aa20.98■□□□□ 0.95
CCM2-214ENST00000481194 ZFP91Q96JP5 570 aaPredicted RBP20.98■□□□□ 0.95
CCM2-214ENST00000481194 FBXO28Q9NVF7 368 aa20.98■□□□□ 0.95
CCM2-214ENST00000481194 SCAF8Q9UPN6 1271 aaKnown RBP20.98■□□□□ 0.95
CCM2-214ENST00000481194 PPP2R2CQ9Y2T4 447 aa20.98■□□□□ 0.95
CCM2-214ENST00000481194 PDXKO00764 312 aa20.98■□□□□ 0.95
CCM2-214ENST00000481194 SRGAP2CP0DJJ0 459 aa20.98■□□□□ 0.95
CCM2-214ENST00000481194 ZFPM1Q8IX07 1006 aa20.98■□□□□ 0.95
CCM2-214ENST00000481194 WDR18Q9BV38 432 aa20.98■□□□□ 0.95
CCM2-214ENST00000481194 CWC15Q9P013 229 aaKnown RBP20.98■□□□□ 0.95
CCM2-214ENST00000481194 EPN1Q9Y6I3 576 aaPredicted RBP20.98■□□□□ 0.95
CCM2-214ENST00000481194 SLC16A3O15427 465 aaKnown RBP20.98■□□□□ 0.95
CCM2-214ENST00000481194 LMAN1P49257 510 aa20.98■□□□□ 0.95
CCM2-214ENST00000481194 PPIL2Q13356 520 aa20.98■□□□□ 0.95
CCM2-214ENST00000481194 NIPA1Q7RTP0 329 aa20.98■□□□□ 0.95
CCM2-214ENST00000481194 RPGRIP1Q96KN7 1286 aa20.98■□□□□ 0.95
CCM2-214ENST00000481194 NLRP4Q96MN2 994 aa20.98■□□□□ 0.95
CCM2-214ENST00000481194 HIP1RO75146 1068 aa20.97■□□□□ 0.95
CCM2-214ENST00000481194 C7orf31Q8N865 590 aa20.97■□□□□ 0.95
CCM2-214ENST00000481194 KCNH7Q9NS40 1196 aa20.97■□□□□ 0.95
CCM2-214ENST00000481194 H2AFZP0C0S5 128 aa20.97■□□□□ 0.95
CCM2-214ENST00000481194 AP3M2P53677 418 aa20.97■□□□□ 0.95
CCM2-214ENST00000481194 RBL2Q08999 1139 aa20.97■□□□□ 0.95
CCM2-214ENST00000481194 MYO1EQ12965 1108 aa20.97■□□□□ 0.95
CCM2-214ENST00000481194 H2AFVQ71UI9 128 aa20.97■□□□□ 0.95
CCM2-214ENST00000481194 TAAR1Q96RJ0 339 aa20.97■□□□□ 0.95
CCM2-214ENST00000481194 MRPL4Q9BYD3 311 aaKnown RBP20.97■□□□□ 0.95
CCM2-214ENST00000481194 RANBP17Q9H2T7 1088 aaKnown RBP20.97■□□□□ 0.95
CCM2-214ENST00000481194 MYO1AQ9UBC5 1043 aa20.97■□□□□ 0.95
CCM2-214ENST00000481194 LPXNO60711 386 aa20.97■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms