RNA–Protein interactions for RNA: ENST00000480638.1

CALD1-219, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 560 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-219ENST00000480638 KIAA1958Q8N8K9 716 aa7.46□□□□□ -1.22
CALD1-219ENST00000480638 FEZF2Q8TBJ5 459 aa7.46□□□□□ -1.22
CALD1-219ENST00000480638 YTHDC1Q96MU7 727 aaKnown RBP7.46□□□□□ -1.22
CALD1-219ENST00000480638 TACO1Q9BSH4 297 aaKnown RBP7.46□□□□□ -1.22
CALD1-219ENST00000480638 PCIF1Q9H4Z3 704 aa7.46□□□□□ -1.22
CALD1-219ENST00000480638 ZCCHC4Q9H5U6 513 aa7.46□□□□□ -1.22
CALD1-219ENST00000480638 L2HGDHQ9H9P8 463 aa7.46□□□□□ -1.22
CALD1-219ENST00000480638 INCENPQ9NQS7 918 aa7.46□□□□□ -1.22
CALD1-219ENST00000480638 UCKL1Q9NWZ5 548 aa7.46□□□□□ -1.22
CALD1-219ENST00000480638 ZKSCAN5Q9Y2L8 839 aa7.46□□□□□ -1.22
CALD1-219ENST00000480638 ASB1Q9Y576 335 aa7.46□□□□□ -1.22
CALD1-219ENST00000480638 SASH1O94885 1247 aa7.45□□□□□ -1.22
CALD1-219ENST00000480638 CLSTN1O94985 981 aa7.45□□□□□ -1.22
CALD1-219ENST00000480638 KNG1P01042 644 aa7.45□□□□□ -1.22
CALD1-219ENST00000480638 CHGBP05060 677 aa7.45□□□□□ -1.22
CALD1-219ENST00000480638 ATP2A2P16615 1042 aaKnown RBP7.45□□□□□ -1.22
CALD1-219ENST00000480638 FNTBP49356 437 aa7.45□□□□□ -1.22
CALD1-219ENST00000480638 ZNF174Q15697 407 aa7.45□□□□□ -1.22
CALD1-219ENST00000480638 MCTP2Q6DN12 878 aa7.45□□□□□ -1.22
CALD1-219ENST00000480638 TXNDC5Q8NBS9 432 aaKnown RBP7.45□□□□□ -1.22
CALD1-219ENST00000480638 HIPK4Q8NE63 616 aa7.45□□□□□ -1.22
CALD1-219ENST00000480638 GBP4Q96PP9 640 aa7.45□□□□□ -1.22
CALD1-219ENST00000480638 PARD6AQ9NPB6 346 aa7.45□□□□□ -1.22
CALD1-219ENST00000480638 OXSMQ9NWU1 459 aa7.45□□□□□ -1.22
CALD1-219ENST00000480638 MAPRE3Q9UPY8 281 aa7.45□□□□□ -1.22
CALD1-219ENST00000480638 INHBBP09529 407 aa7.44□□□□□ -1.22
CALD1-219ENST00000480638 GJA9P57773 515 aa7.44□□□□□ -1.22
CALD1-219ENST00000480638 RGL3Q3MIN7 710 aa7.44□□□□□ -1.22
CALD1-219ENST00000480638 NT5DC1Q5TFE4 455 aa7.44□□□□□ -1.22
CALD1-219ENST00000480638 AMNQ9BXJ7 453 aa7.44□□□□□ -1.22
CALD1-219ENST00000480638 XYLT2Q9H1B5 865 aa7.44□□□□□ -1.22
CALD1-219ENST00000480638 ACSS2Q9NR19 701 aa7.44□□□□□ -1.22
CALD1-219ENST00000480638 GALNT8Q9NY28 637 aa7.44□□□□□ -1.22
CALD1-219ENST00000480638 H2AFY2Q9P0M6 372 aaPredicted RBP7.44□□□□□ -1.22
CALD1-219ENST00000480638 FTSJ1Q9UET6 329 aa7.44□□□□□ -1.22
CALD1-219ENST00000480638 PRAMEF22A3QJZ6 481 aa7.43□□□□□ -1.22
CALD1-219ENST00000480638 NOBOXO60393 691 aa7.43□□□□□ -1.22
CALD1-219ENST00000480638 KLHL18O94889 574 aa7.43□□□□□ -1.22
CALD1-219ENST00000480638 SLC9A1P19634 815 aa7.43□□□□□ -1.22
CALD1-219ENST00000480638 IL13RA1P78552 427 aa7.43□□□□□ -1.22
CALD1-219ENST00000480638 FBLN7Q53RD9 439 aa7.43□□□□□ -1.22
CALD1-219ENST00000480638 LRSAM1Q6UWE0 723 aa7.43□□□□□ -1.22
CALD1-219ENST00000480638 RNF180Q86T96 592 aa7.43□□□□□ -1.22
CALD1-219ENST00000480638 RTN4RL1Q86UN2 441 aaPredicted RBP7.43□□□□□ -1.22
CALD1-219ENST00000480638 CHTF18Q8WVB6 975 aa7.43□□□□□ -1.22
CALD1-219ENST00000480638 FOXRED1Q96CU9 486 aaPredicted RBP7.43□□□□□ -1.22
CALD1-219ENST00000480638 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7.43□□□□□ -1.22
CALD1-219ENST00000480638 THG1LQ9NWX6 298 aaKnown RBP7.43□□□□□ -1.22
CALD1-219ENST00000480638 SPO11Q9Y5K1 396 aa7.43□□□□□ -1.22
CALD1-219ENST00000480638 OTOL1A6NHN0 477 aaPredicted RBP7.42□□□□□ -1.22
CALD1-219ENST00000480638 C9orf118A6NHY6 69 aa7.42□□□□□ -1.22
CALD1-219ENST00000480638 H0Y858 1186 aa7.42□□□□□ -1.22
CALD1-219ENST00000480638 GOLGA6L22H0YM25 854 aa7.42□□□□□ -1.22
CALD1-219ENST00000480638 CYP1A1P04798 512 aaPredicted RBP7.42□□□□□ -1.22
CALD1-219ENST00000480638 MASP1P48740 699 aa7.42□□□□□ -1.22
CALD1-219ENST00000480638 DPP8Q6V1X1 898 aaPredicted RBP7.42□□□□□ -1.22
CALD1-219ENST00000480638 SMC1BQ8NDV3 1235 aa7.42□□□□□ -1.22
CALD1-219ENST00000480638 NUDT10Q8NFP7 164 aa7.42□□□□□ -1.22
CALD1-219ENST00000480638 OR2W6PQ8NHA6 318 aa7.42□□□□□ -1.22
CALD1-219ENST00000480638 LEO1Q8WVC0 666 aaPredicted RBP7.42□□□□□ -1.22
CALD1-219ENST00000480638 ERCC4Q92889 916 aaPredicted RBP7.42□□□□□ -1.22
CALD1-219ENST00000480638 NUDT11Q96G61 164 aa7.42□□□□□ -1.22
CALD1-219ENST00000480638 ELF4Q99607 663 aaPredicted RBP7.42□□□□□ -1.22
CALD1-219ENST00000480638 TMEM168Q9H0V1 697 aa7.42□□□□□ -1.22
CALD1-219ENST00000480638 USP40Q9NVE5 1235 aa7.42□□□□□ -1.22
CALD1-219ENST00000480638 IFT57Q9NWB7 429 aa7.42□□□□□ -1.22
CALD1-219ENST00000480638 CYP17A1P05093 508 aa7.41□□□□□ -1.22
CALD1-219ENST00000480638 PTX3P26022 381 aaPredicted RBP7.41□□□□□ -1.22
CALD1-219ENST00000480638 STAT3P40763 770 aa7.41□□□□□ -1.22
CALD1-219ENST00000480638 ECE1P42892 770 aa7.41□□□□□ -1.22
CALD1-219ENST00000480638 SCNN1BP51168 640 aa7.41□□□□□ -1.22
CALD1-219ENST00000480638 ALDH6A1Q02252 535 aaKnown RBP7.41□□□□□ -1.22
CALD1-219ENST00000480638 STILQ15468 1287 aa7.41□□□□□ -1.22
CALD1-219ENST00000480638 ESRP1Q6NXG1 681 aaKnown RBP7.41□□□□□ -1.22
CALD1-219ENST00000480638 EFHBQ8N7U6 833 aa7.41□□□□□ -1.22
CALD1-219ENST00000480638 C16orf92Q96LL3 132 aa7.41□□□□□ -1.22
CALD1-219ENST00000480638 BTBD2Q9BX70 525 aa7.41□□□□□ -1.22
CALD1-219ENST00000480638 MROH6A6NGR9 719 aa7.4□□□□□ -1.22
CALD1-219ENST00000480638 SART3Q15020 963 aaKnown RBP7.4□□□□□ -1.22
CALD1-219ENST00000480638 EPHA7Q15375 998 aa7.4□□□□□ -1.22
CALD1-219ENST00000480638 TTLL10Q6ZVT0 673 aa7.4□□□□□ -1.22
CALD1-219ENST00000480638 ZDHHC14Q8IZN3 488 aa7.4□□□□□ -1.22
CALD1-219ENST00000480638 MBD6Q96DN6 1003 aa7.4□□□□□ -1.22
CALD1-219ENST00000480638 LCORQ96JN0 433 aaPredicted RBP7.4□□□□□ -1.22
CALD1-219ENST00000480638 GPR101Q96P66 508 aaPredicted RBP7.4□□□□□ -1.22
CALD1-219ENST00000480638 FOXB1Q99853 325 aa7.4□□□□□ -1.22
CALD1-219ENST00000480638 OR10A5Q9H207 317 aa7.4□□□□□ -1.22
CALD1-219ENST00000480638 TOMM22Q9NS69 142 aa7.4□□□□□ -1.22
CALD1-219ENST00000480638 PRKAB1Q9Y478 270 aa7.4□□□□□ -1.22
CALD1-219ENST00000480638 CADPSQ9ULU8 1353 aa7.39□□□□□ -1.23
CALD1-219ENST00000480638 UBA6A0AVT1 1052 aaPredicted RBP7.39□□□□□ -1.23
CALD1-219ENST00000480638 PRLP01236 227 aa7.39□□□□□ -1.23
CALD1-219ENST00000480638 HOXA5P20719 270 aa7.39□□□□□ -1.23
CALD1-219ENST00000480638 KPNA1P52294 538 aaPredicted RBP7.39□□□□□ -1.23
CALD1-219ENST00000480638 IL2P60568 153 aa7.39□□□□□ -1.23
CALD1-219ENST00000480638 WDR72Q3MJ13 1102 aa7.39□□□□□ -1.23
CALD1-219ENST00000480638 KANK2Q63ZY3 851 aa7.39□□□□□ -1.23
CALD1-219ENST00000480638 Q6ZUG5 572 aa7.39□□□□□ -1.23
CALD1-219ENST00000480638 CXXC5Q7LFL8 322 aaKnown RBP7.39□□□□□ -1.23
CALD1-219ENST00000480638 FRMD5Q7Z6J6 570 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms