RNA–Protein interactions for RNA: ENST00000480539.1

ABCF3-213, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-213ENST00000480539 ADAM17P78536 824 aa17■□□□□ 0.31
ABCF3-213ENST00000480539 PTK7Q13308 1070 aa17■□□□□ 0.31
ABCF3-213ENST00000480539 RUFY4Q6ZNE9 571 aa17■□□□□ 0.31
ABCF3-213ENST00000480539 BADQ92934 168 aa17■□□□□ 0.31
ABCF3-213ENST00000480539 EIF2AK1Q9BQI3 630 aaKnown RBP17■□□□□ 0.31
ABCF3-213ENST00000480539 ZSCAN16Q9H4T2 348 aaPredicted RBP17■□□□□ 0.31
ABCF3-213ENST00000480539 SEPT9Q9UHD8 586 aaPredicted RBP17■□□□□ 0.31
ABCF3-213ENST00000480539 ZBTB42B2RXF5 422 aa16.99■□□□□ 0.31
ABCF3-213ENST00000480539 RBAK-RBAKDNI3L0D1 243 aa16.99■□□□□ 0.31
ABCF3-213ENST00000480539 LAD1O00515 517 aa16.99■□□□□ 0.31
ABCF3-213ENST00000480539 HBP1O60381 514 aa16.99■□□□□ 0.31
ABCF3-213ENST00000480539 F13A1P00488 732 aa16.99■□□□□ 0.31
ABCF3-213ENST00000480539 TIMP1P01033 207 aa16.99■□□□□ 0.31
ABCF3-213ENST00000480539 QARSP47897 775 aaKnown RBP16.99■□□□□ 0.31
ABCF3-213ENST00000480539 FXR2P51116 673 aaKnown RBP eCLIP16.99■□□□□ 0.31
ABCF3-213ENST00000480539 CCL23P55773 120 aa16.99■□□□□ 0.31
ABCF3-213ENST00000480539 PSMC5P62195 406 aa16.99■□□□□ 0.31
ABCF3-213ENST00000480539 CTTNQ14247 550 aaKnown RBP16.99■□□□□ 0.31
ABCF3-213ENST00000480539 SF3A1Q15459 793 aaKnown RBP16.99■□□□□ 0.31
ABCF3-213ENST00000480539 FOXD4L6Q3SYB3 417 aaPredicted RBP16.99■□□□□ 0.31
ABCF3-213ENST00000480539 MARCH8Q5T0T0 291 aa16.99■□□□□ 0.31
ABCF3-213ENST00000480539 PRPF38BQ5VTL8 546 aaKnown RBP16.99■□□□□ 0.31
ABCF3-213ENST00000480539 PLA2G4FQ68DD2 849 aa16.99■□□□□ 0.31
ABCF3-213ENST00000480539 FOXD4L3Q6VB84 417 aaPredicted RBP16.99■□□□□ 0.31
ABCF3-213ENST00000480539 SERINC5Q86VE9 423 aa16.99■□□□□ 0.31
ABCF3-213ENST00000480539 CCDC155Q8N6L0 562 aa16.99■□□□□ 0.31
ABCF3-213ENST00000480539 BBXQ8WY36 941 aaPredicted RBP16.99■□□□□ 0.31
ABCF3-213ENST00000480539 LBHD1Q9BQE6 289 aaPredicted RBP16.99■□□□□ 0.31
ABCF3-213ENST00000480539 WNT8AQ9H1J5 351 aa16.99■□□□□ 0.31
ABCF3-213ENST00000480539 CLIC4Q9Y696 253 aa16.99■□□□□ 0.31
ABCF3-213ENST00000480539 COL1A2P08123 1366 aa16.99■□□□□ 0.31
ABCF3-213ENST00000480539 RRN3P2A6NIE6 340 aa16.98■□□□□ 0.31
ABCF3-213ENST00000480539 P4HBP07237 508 aaKnown RBP16.98■□□□□ 0.31
ABCF3-213ENST00000480539 CTSHP09668 335 aa16.98■□□□□ 0.31
ABCF3-213ENST00000480539 ANP32AP39687 249 aaKnown RBP16.98■□□□□ 0.31
ABCF3-213ENST00000480539 PRPHP41219 470 aa16.98■□□□□ 0.31
ABCF3-213ENST00000480539 CEBPZQ03701 1054 aaKnown RBP16.98■□□□□ 0.31
ABCF3-213ENST00000480539 IL17AQ16552 155 aa16.98■□□□□ 0.31
ABCF3-213ENST00000480539 TRIM71Q2Q1W2 868 aaKnown RBP16.98■□□□□ 0.31
ABCF3-213ENST00000480539 SCLYQ96I15 445 aa16.98■□□□□ 0.31
ABCF3-213ENST00000480539 SH2D3AQ9BRG2 576 aa16.98■□□□□ 0.31
ABCF3-213ENST00000480539 FAM49AQ9H0Q0 323 aaPredicted RBP16.98■□□□□ 0.31
ABCF3-213ENST00000480539 MYH9P35579 1960 aaKnown RBP16.98■□□□□ 0.31
ABCF3-213ENST00000480539 TRIP12Q14669 1992 aaPredicted RBP16.97■□□□□ 0.31
ABCF3-213ENST00000480539 MBLAC1A4D2B0 266 aaPredicted RBP16.97■□□□□ 0.31
ABCF3-213ENST00000480539 VWA3AA6NCI4 1184 aa16.97■□□□□ 0.31
ABCF3-213ENST00000480539 PP2D1A8MPX8 630 aa16.97■□□□□ 0.31
ABCF3-213ENST00000480539 BMP15O95972 392 aa16.97■□□□□ 0.31
ABCF3-213ENST00000480539 BFSP2Q13515 415 aa16.97■□□□□ 0.31
ABCF3-213ENST00000480539 MTERF2Q49AM1 385 aa16.97■□□□□ 0.31
ABCF3-213ENST00000480539 XKR3Q5GH77 459 aa16.97■□□□□ 0.31
ABCF3-213ENST00000480539 ZNF484Q5JVG2 852 aa16.97■□□□□ 0.31
ABCF3-213ENST00000480539 CHRDL2Q6WN34 429 aa16.97■□□□□ 0.31
ABCF3-213ENST00000480539 DTHD1Q6ZMT9 781 aa16.97■□□□□ 0.31
ABCF3-213ENST00000480539 TPH2Q8IWU9 490 aa16.97■□□□□ 0.31
ABCF3-213ENST00000480539 CAGE1Q8TC20 777 aa16.97■□□□□ 0.31
ABCF3-213ENST00000480539 NEK9Q8TD19 979 aa16.97■□□□□ 0.31
ABCF3-213ENST00000480539 TNPO1Q92973 898 aaKnown RBP16.97■□□□□ 0.31
ABCF3-213ENST00000480539 USP28Q96RU2 1077 aa16.97■□□□□ 0.31
ABCF3-213ENST00000480539 LRWD1Q9UFC0 647 aa16.97■□□□□ 0.31
ABCF3-213ENST00000480539 CEP131Q9UPN4 1083 aa16.97■□□□□ 0.31
ABCF3-213ENST00000480539 DDX11L8A8MPP1 907 aa16.96■□□□□ 0.31
ABCF3-213ENST00000480539 PITPNM1O00562 1244 aa16.96■□□□□ 0.31
ABCF3-213ENST00000480539 MED24O75448 989 aa16.96■□□□□ 0.31
ABCF3-213ENST00000480539 STBD1O95210 358 aa16.96■□□□□ 0.31
ABCF3-213ENST00000480539 C22orf31O95567 290 aa16.96■□□□□ 0.31
ABCF3-213ENST00000480539 CKBP12277 381 aa16.96■□□□□ 0.31
ABCF3-213ENST00000480539 PDIA4P13667 645 aaKnown RBP16.96■□□□□ 0.31
ABCF3-213ENST00000480539 CSF2RAP15509 400 aa16.96■□□□□ 0.31
ABCF3-213ENST00000480539 THPOP40225 353 aa16.96■□□□□ 0.31
ABCF3-213ENST00000480539 FPGSQ05932 587 aa16.96■□□□□ 0.31
ABCF3-213ENST00000480539 RBL2Q08999 1139 aa16.96■□□□□ 0.31
ABCF3-213ENST00000480539 MFSD5Q6N075 450 aa16.96■□□□□ 0.31
ABCF3-213ENST00000480539 POTEGQ6S5H5 508 aa16.96■□□□□ 0.31
ABCF3-213ENST00000480539 MTHFD1LQ6UB35 978 aa16.96■□□□□ 0.31
ABCF3-213ENST00000480539 ANO5Q75V66 913 aa16.96■□□□□ 0.31
ABCF3-213ENST00000480539 IGSF22Q8N9C0 903 aa16.96■□□□□ 0.31
ABCF3-213ENST00000480539 ERMNQ8TAM6 284 aa16.96■□□□□ 0.31
ABCF3-213ENST00000480539 SNX29Q8TEQ0 813 aa16.96■□□□□ 0.31
ABCF3-213ENST00000480539 ZSWIM4Q9H7M6 989 aa16.96■□□□□ 0.31
ABCF3-213ENST00000480539 NRBP2Q9NSY0 501 aa16.96■□□□□ 0.31
ABCF3-213ENST00000480539 DAXXQ9UER7 740 aaPredicted RBP16.96■□□□□ 0.31
ABCF3-213ENST00000480539 ARID2Q68CP9 1835 aa16.96■□□□□ 0.3
ABCF3-213ENST00000480539 DKC1O60832 514 aaKnown RBP eCLIP16.95■□□□□ 0.3
ABCF3-213ENST00000480539 SLITRK3O94933 977 aa16.95■□□□□ 0.3
ABCF3-213ENST00000480539 BRD1O95696 1058 aa16.95■□□□□ 0.3
ABCF3-213ENST00000480539 SPATA31C1P0DKV0 1188 aa16.95■□□□□ 0.3
ABCF3-213ENST00000480539 KLRC1P26715 233 aa16.95■□□□□ 0.3
ABCF3-213ENST00000480539 YWHABP31946 246 aaKnown RBP16.95■□□□□ 0.3
ABCF3-213ENST00000480539 CCT6AP40227 531 aaKnown RBP16.95■□□□□ 0.3
ABCF3-213ENST00000480539 CLCN3P51790 818 aa16.95■□□□□ 0.3
ABCF3-213ENST00000480539 PTPAQ15257 358 aa16.95■□□□□ 0.3
ABCF3-213ENST00000480539 ZNF618Q5T7W0 954 aa16.95■□□□□ 0.3
ABCF3-213ENST00000480539 HAUS3Q68CZ6 603 aa16.95■□□□□ 0.3
ABCF3-213ENST00000480539 TAF2Q6P1X5 1199 aa16.95■□□□□ 0.3
ABCF3-213ENST00000480539 LRRC8DQ7L1W4 858 aa16.95■□□□□ 0.3
ABCF3-213ENST00000480539 C4orf19Q8IY42 314 aa16.95■□□□□ 0.3
ABCF3-213ENST00000480539 TMEM199Q8N511 208 aa16.95■□□□□ 0.3
ABCF3-213ENST00000480539 RETREG2Q8NC44 543 aa16.95■□□□□ 0.3
ABCF3-213ENST00000480539 DNAJB3Q8WWF6 145 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms