RNA–Protein interactions for RNA: ENST00000480468.1

SIK3-210, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 2,237 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-210ENST00000480468 SRBD1Q8N5C6 995 aaKnown RBP11.59□□□□□ -0.55
SIK3-210ENST00000480468 METTL13Q8N6R0 699 aa11.59□□□□□ -0.55
SIK3-210ENST00000480468 SPATA5Q8NB90 893 aa11.59□□□□□ -0.55
SIK3-210ENST00000480468 SH3TC2Q8TF17 1288 aa11.59□□□□□ -0.55
SIK3-210ENST00000480468 EZH1Q92800 747 aaPredicted RBP11.59□□□□□ -0.55
SIK3-210ENST00000480468 DTNBP1Q96EV8 351 aa11.59□□□□□ -0.55
SIK3-210ENST00000480468 RNPEPL1Q9HAU8 725 aa11.59□□□□□ -0.55
SIK3-210ENST00000480468 ZDHHC18Q9NUE0 388 aa11.59□□□□□ -0.55
SIK3-210ENST00000480468 WDR35Q9P2L0 1181 aa11.59□□□□□ -0.55
SIK3-210ENST00000480468 SUCLA2Q9P2R7 463 aaPredicted RBP11.59□□□□□ -0.55
SIK3-210ENST00000480468 AXIN2Q9Y2T1 843 aa11.59□□□□□ -0.55
SIK3-210ENST00000480468 DUOX1Q9NRD9 1551 aa11.58□□□□□ -0.56
SIK3-210ENST00000480468 A8MUI8 341 aa11.58□□□□□ -0.56
SIK3-210ENST00000480468 ACADSP16219 412 aa11.58□□□□□ -0.56
SIK3-210ENST00000480468 PMS2P54278 862 aa11.58□□□□□ -0.56
SIK3-210ENST00000480468 DRG2P55039 364 aaKnown RBP11.58□□□□□ -0.56
SIK3-210ENST00000480468 CNGA2Q16280 664 aa11.58□□□□□ -0.56
SIK3-210ENST00000480468 TAOK1Q7L7X3 1001 aa11.58□□□□□ -0.56
SIK3-210ENST00000480468 CABP7Q86V35 215 aa11.58□□□□□ -0.56
SIK3-210ENST00000480468 CNBD1Q8NA66 436 aa11.58□□□□□ -0.56
SIK3-210ENST00000480468 GORASP1Q9BQQ3 440 aa11.58□□□□□ -0.56
SIK3-210ENST00000480468 PCDHA4Q9UN74 947 aa11.58□□□□□ -0.56
SIK3-210ENST00000480468 MYH4Q9Y623 1939 aa11.58□□□□□ -0.56
SIK3-210ENST00000480468 FAM187AA6NFU0 413 aa11.58□□□□□ -0.56
SIK3-210ENST00000480468 RNF8O76064 485 aa11.58□□□□□ -0.56
SIK3-210ENST00000480468 SHBGP04278 402 aa11.58□□□□□ -0.56
SIK3-210ENST00000480468 KCNA6P17658 529 aa11.58□□□□□ -0.56
SIK3-210ENST00000480468 CCDC152Q4G0S7 254 aa11.58□□□□□ -0.56
SIK3-210ENST00000480468 DUPD1Q68J44 220 aa11.58□□□□□ -0.56
SIK3-210ENST00000480468 MFSD5Q6N075 450 aa11.58□□□□□ -0.56
SIK3-210ENST00000480468 ENDOVQ8N8Q3 282 aaKnown RBP11.58□□□□□ -0.56
SIK3-210ENST00000480468 TRAPPC9Q96Q05 1148 aa11.58□□□□□ -0.56
SIK3-210ENST00000480468 PAIP2Q9BPZ3 127 aaKnown RBP11.58□□□□□ -0.56
SIK3-210ENST00000480468 PACSIN1Q9BY11 444 aa11.58□□□□□ -0.56
SIK3-210ENST00000480468 MTFR1LQ9H019 292 aa11.58□□□□□ -0.56
SIK3-210ENST00000480468 TMEM60Q9H2L4 133 aa11.58□□□□□ -0.56
SIK3-210ENST00000480468 AZI2Q9H6S1 392 aa11.58□□□□□ -0.56
SIK3-210ENST00000480468 ARHGEF10LQ9HCE6 1279 aa11.58□□□□□ -0.56
SIK3-210ENST00000480468 RIC8AQ9NPQ8 531 aa11.58□□□□□ -0.56
SIK3-210ENST00000480468 TCP11L1Q9NUJ3 509 aa11.58□□□□□ -0.56
SIK3-210ENST00000480468 PRKAG3Q9UGI9 489 aa11.58□□□□□ -0.56
SIK3-210ENST00000480468 STXBP5LQ9Y2K9 1186 aa11.58□□□□□ -0.56
SIK3-210ENST00000480468 ATAD5Q96QE3 1844 aa11.57□□□□□ -0.56
SIK3-210ENST00000480468 MEGF6O75095 1541 aa11.57□□□□□ -0.56
SIK3-210ENST00000480468 A0A0A6YYK5 440 aaPredicted RBP11.57□□□□□ -0.56
SIK3-210ENST00000480468 M0R2N6 131 aa11.57□□□□□ -0.56
SIK3-210ENST00000480468 ATP5HO75947 161 aa11.57□□□□□ -0.56
SIK3-210ENST00000480468 FGRP09769 529 aa11.57□□□□□ -0.56
SIK3-210ENST00000480468 ITGA4P13612 1032 aa11.57□□□□□ -0.56
SIK3-210ENST00000480468 PDE6BP35913 854 aa11.57□□□□□ -0.56
SIK3-210ENST00000480468 NPEPPSP55786 919 aa11.57□□□□□ -0.56
SIK3-210ENST00000480468 KLC1Q07866 573 aa11.57□□□□□ -0.56
SIK3-210ENST00000480468 KLHL30Q0D2K2 578 aa11.57□□□□□ -0.56
SIK3-210ENST00000480468 MKRN3Q13064 507 aaKnown RBP11.57□□□□□ -0.56
SIK3-210ENST00000480468 DYNC1I2Q13409 638 aaKnown RBP11.57□□□□□ -0.56
SIK3-210ENST00000480468 ADAM9Q13443 819 aa11.57□□□□□ -0.56
SIK3-210ENST00000480468 CUL3Q13618 768 aa11.57□□□□□ -0.56
SIK3-210ENST00000480468 NUGGCQ68CJ6 796 aa11.57□□□□□ -0.56
SIK3-210ENST00000480468 UNC13DQ70J99 1090 aa11.57□□□□□ -0.56
SIK3-210ENST00000480468 ARHGAP22Q7Z5H3 698 aa11.57□□□□□ -0.56
SIK3-210ENST00000480468 SYCE1Q8N0S2 351 aa11.57□□□□□ -0.56
SIK3-210ENST00000480468 KIF2BQ8N4N8 673 aa11.57□□□□□ -0.56
SIK3-210ENST00000480468 ZBTB38Q8NAP3 1195 aaPredicted RBP11.57□□□□□ -0.56
SIK3-210ENST00000480468 NLRC4Q9NPP4 1024 aa11.57□□□□□ -0.56
SIK3-210ENST00000480468 CNNM1Q9NRU3 951 aa11.57□□□□□ -0.56
SIK3-210ENST00000480468 RPL26L1Q9UNX3 145 aaKnown RBP11.57□□□□□ -0.56
SIK3-210ENST00000480468 DIS3Q9Y2L1 958 aaKnown RBP11.57□□□□□ -0.56
SIK3-210ENST00000480468 C2CD2Q9Y426 696 aa11.57□□□□□ -0.56
SIK3-210ENST00000480468 UBR2Q8IWV8 1755 aa11.57□□□□□ -0.56
SIK3-210ENST00000480468 CCDC194A0A1B0GVG4 234 aa11.56□□□□□ -0.56
SIK3-210ENST00000480468 UNC5CO95185 931 aa11.56□□□□□ -0.56
SIK3-210ENST00000480468 FGFR2P21802 821 aa11.56□□□□□ -0.56
SIK3-210ENST00000480468 RXRBP28702 533 aa11.56□□□□□ -0.56
SIK3-210ENST00000480468 CABP4P57796 275 aa11.56□□□□□ -0.56
SIK3-210ENST00000480468 PTENP60484 403 aa11.56□□□□□ -0.56
SIK3-210ENST00000480468 KLRC3Q07444 240 aa11.56□□□□□ -0.56
SIK3-210ENST00000480468 PSMD2Q13200 908 aa11.56□□□□□ -0.56
SIK3-210ENST00000480468 PUM3Q15397 648 aaKnown RBP11.56□□□□□ -0.56
SIK3-210ENST00000480468 ASIC2Q16515 512 aa11.56□□□□□ -0.56
SIK3-210ENST00000480468 RNF43Q68DV7 783 aa11.56□□□□□ -0.56
SIK3-210ENST00000480468 GALNT17Q6IS24 598 aa11.56□□□□□ -0.56
SIK3-210ENST00000480468 CHADLQ6NUI6 762 aa11.56□□□□□ -0.56
SIK3-210ENST00000480468 SPATA21Q7Z572 469 aa11.56□□□□□ -0.56
SIK3-210ENST00000480468 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.56□□□□□ -0.56
SIK3-210ENST00000480468 KLHL23Q8NBE8 558 aa11.56□□□□□ -0.56
SIK3-210ENST00000480468 DAGLBQ8NCG7 672 aa11.56□□□□□ -0.56
SIK3-210ENST00000480468 TPCN2Q8NHX9 752 aa11.56□□□□□ -0.56
SIK3-210ENST00000480468 B4GALNT2Q8NHY0 566 aa11.56□□□□□ -0.56
SIK3-210ENST00000480468 STK32AQ8WU08 396 aa11.56□□□□□ -0.56
SIK3-210ENST00000480468 RNF25Q96BH1 459 aaPredicted RBP11.56□□□□□ -0.56
SIK3-210ENST00000480468 PLIN2Q99541 437 aa11.56□□□□□ -0.56
SIK3-210ENST00000480468 EPAS1Q99814 870 aa11.56□□□□□ -0.56
SIK3-210ENST00000480468 TSG101Q99816 390 aa11.56□□□□□ -0.56
SIK3-210ENST00000480468 ERP44Q9BS26 406 aa11.56□□□□□ -0.56
SIK3-210ENST00000480468 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.56□□□□□ -0.56
SIK3-210ENST00000480468 DPH5Q9H2P9 285 aa11.56□□□□□ -0.56
SIK3-210ENST00000480468 VCXQ9H320 206 aa11.56□□□□□ -0.56
SIK3-210ENST00000480468 TXLNGQ9NUQ3 528 aa11.56□□□□□ -0.56
SIK3-210ENST00000480468 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.56□□□□□ -0.56
SIK3-210ENST00000480468 ADAMTS1Q9UHI8 967 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms