RNA–Protein interactions for RNA: ENST00000480362.5

UPF3A-206, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 965 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-206ENST00000480362 ISM2Q6H9L7 571 aa19.6■□□□□ 0.73
UPF3A-206ENST00000480362 GPBP1Q86WP2 473 aa19.6■□□□□ 0.73
UPF3A-206ENST00000480362 TRPV1Q8NER1 839 aa19.6■□□□□ 0.73
UPF3A-206ENST00000480362 OR6J1Q8NGC5 347 aa19.6■□□□□ 0.73
UPF3A-206ENST00000480362 DBR1Q9UK59 544 aaKnown RBP19.6■□□□□ 0.73
UPF3A-206ENST00000480362 MAN1B1Q9UKM7 699 aa19.6■□□□□ 0.73
UPF3A-206ENST00000480362 MAFBQ9Y5Q3 323 aaPredicted RBP19.6■□□□□ 0.73
UPF3A-206ENST00000480362 IGSF9BQ9UPX0 1349 aa19.59■□□□□ 0.73
UPF3A-206ENST00000480362 ADCY3O60266 1144 aa19.59■□□□□ 0.73
UPF3A-206ENST00000480362 STBD1O95210 358 aa19.59■□□□□ 0.73
UPF3A-206ENST00000480362 ELNP15502 786 aa19.59■□□□□ 0.73
UPF3A-206ENST00000480362 YWHABP31946 246 aaKnown RBP19.59■□□□□ 0.73
UPF3A-206ENST00000480362 STAT5BP51692 787 aa19.59■□□□□ 0.73
UPF3A-206ENST00000480362 ASIC1P78348 528 aa19.59■□□□□ 0.73
UPF3A-206ENST00000480362 TRIM32Q13049 653 aa19.59■□□□□ 0.73
UPF3A-206ENST00000480362 ARSHQ5FYA8 562 aa19.59■□□□□ 0.73
UPF3A-206ENST00000480362 UTP14CQ5TAP6 766 aaKnown RBP19.59■□□□□ 0.73
UPF3A-206ENST00000480362 DYMQ7RTS9 669 aa19.59■□□□□ 0.73
UPF3A-206ENST00000480362 TRMT1LQ7Z2T5 733 aaKnown RBP19.59■□□□□ 0.73
UPF3A-206ENST00000480362 RAET1EQ8TD07 263 aa19.59■□□□□ 0.73
UPF3A-206ENST00000480362 AFG1LQ8WV93 481 aa19.59■□□□□ 0.73
UPF3A-206ENST00000480362 DDX12PQ92771 950 aa19.59■□□□□ 0.73
UPF3A-206ENST00000480362 GSDMAQ96QA5 445 aa19.59■□□□□ 0.73
UPF3A-206ENST00000480362 TSPY26PQ9H489 355 aa19.59■□□□□ 0.73
UPF3A-206ENST00000480362 BMP2KQ9NSY1 1161 aaPredicted RBP19.59■□□□□ 0.73
UPF3A-206ENST00000480362 ANKEF1Q9NU02 776 aa19.59■□□□□ 0.73
UPF3A-206ENST00000480362 GNEQ9Y223 722 aaKnown RBP19.59■□□□□ 0.73
UPF3A-206ENST00000480362 CASP8AP2Q9UKL3 1982 aa19.58■□□□□ 0.73
UPF3A-206ENST00000480362 ARHGEF35A5YM69 484 aa19.58■□□□□ 0.72
UPF3A-206ENST00000480362 DYNC1LI2O43237 492 aaPredicted RBP19.58■□□□□ 0.72
UPF3A-206ENST00000480362 KLRC4O43908 158 aa19.58■□□□□ 0.72
UPF3A-206ENST00000480362 LGR5O75473 907 aa19.58■□□□□ 0.72
UPF3A-206ENST00000480362 CYBAP13498 195 aa19.58■□□□□ 0.72
UPF3A-206ENST00000480362 ATP4AP20648 1035 aa19.58■□□□□ 0.72
UPF3A-206ENST00000480362 NLRP12P59046 1061 aa19.58■□□□□ 0.72
UPF3A-206ENST00000480362 STX1AQ16623 288 aa19.58■□□□□ 0.72
UPF3A-206ENST00000480362 RINT1Q6NUQ1 792 aa19.58■□□□□ 0.72
UPF3A-206ENST00000480362 CNNM4Q6P4Q7 775 aa19.58■□□□□ 0.72
UPF3A-206ENST00000480362 OTUD6AQ7L8S5 288 aa19.58■□□□□ 0.72
UPF3A-206ENST00000480362 GAS2L3Q86XJ1 694 aa19.58■□□□□ 0.72
UPF3A-206ENST00000480362 PPTC7Q8NI37 304 aa19.58■□□□□ 0.72
UPF3A-206ENST00000480362 AFAP1L1Q8TED9 768 aa19.58■□□□□ 0.72
UPF3A-206ENST00000480362 AZI2Q9H6S1 392 aa19.58■□□□□ 0.72
UPF3A-206ENST00000480362 WDR81Q562E7 1941 aa19.58■□□□□ 0.72
UPF3A-206ENST00000480362 NPHP3-ACAD11A0A0J9YXS1 232 aa19.57■□□□□ 0.72
UPF3A-206ENST00000480362 TMEM150BA6NC51 233 aa19.57■□□□□ 0.72
UPF3A-206ENST00000480362 KRT18P05783 430 aaKnown RBP19.57■□□□□ 0.72
UPF3A-206ENST00000480362 AKR1A1P14550 325 aa19.57■□□□□ 0.72
UPF3A-206ENST00000480362 RARRES1P49788 294 aa19.57■□□□□ 0.72
UPF3A-206ENST00000480362 PRMT2P55345 433 aa19.57■□□□□ 0.72
UPF3A-206ENST00000480362 PRKCEQ02156 737 aa19.57■□□□□ 0.72
UPF3A-206ENST00000480362 CACNB2Q08289 660 aaPredicted RBP19.57■□□□□ 0.72
UPF3A-206ENST00000480362 MORC3Q14149 939 aa19.57■□□□□ 0.72
UPF3A-206ENST00000480362 KMT5BQ4FZB7 885 aa19.57■□□□□ 0.72
UPF3A-206ENST00000480362 XKR9Q5GH70 373 aa19.57■□□□□ 0.72
UPF3A-206ENST00000480362 XKR3Q5GH77 459 aa19.57■□□□□ 0.72
UPF3A-206ENST00000480362 ANO5Q75V66 913 aa19.57■□□□□ 0.72
UPF3A-206ENST00000480362 PLPPR4Q7Z2D5 763 aa19.57■□□□□ 0.72
UPF3A-206ENST00000480362 TRIML1Q8N9V2 468 aa19.57■□□□□ 0.72
UPF3A-206ENST00000480362 GLG1Q92896 1179 aa19.57■□□□□ 0.72
UPF3A-206ENST00000480362 DNAJC19Q96DA6 116 aa19.57■□□□□ 0.72
UPF3A-206ENST00000480362 RUSC1Q9BVN2 902 aa19.57■□□□□ 0.72
UPF3A-206ENST00000480362 ANO10Q9NW15 660 aa19.57■□□□□ 0.72
UPF3A-206ENST00000480362 CNGA1P29973 690 aa19.56■□□□□ 0.72
UPF3A-206ENST00000480362 RAD51AP2Q09MP3 1159 aa19.56■□□□□ 0.72
UPF3A-206ENST00000480362 KCNB1Q14721 858 aa19.56■□□□□ 0.72
UPF3A-206ENST00000480362 PLA2G4FQ68DD2 849 aa19.56■□□□□ 0.72
UPF3A-206ENST00000480362 PADI6Q6TGC4 694 aa19.56■□□□□ 0.72
UPF3A-206ENST00000480362 C1orf186Q6ZWK4 172 aa19.56■□□□□ 0.72
UPF3A-206ENST00000480362 PXYLP1Q8TE99 480 aa19.56■□□□□ 0.72
UPF3A-206ENST00000480362 CCDC47Q96A33 483 aaKnown RBP19.56■□□□□ 0.72
UPF3A-206ENST00000480362 LENG1Q96BZ8 264 aaPredicted RBP19.56■□□□□ 0.72
UPF3A-206ENST00000480362 CCDC43Q96MW1 224 aaKnown RBP19.56■□□□□ 0.72
UPF3A-206ENST00000480362 SMARCAD1Q9H4L7 1026 aa19.56■□□□□ 0.72
UPF3A-206ENST00000480362 RMND1Q9NWS8 449 aa19.56■□□□□ 0.72
UPF3A-206ENST00000480362 Q9Y3F1 56 aa19.56■□□□□ 0.72
UPF3A-206ENST00000480362 TRIM17Q9Y577 477 aa19.56■□□□□ 0.72
UPF3A-206ENST00000480362 EMSYQ7Z589 1322 aa19.55■□□□□ 0.72
UPF3A-206ENST00000480362 PVALEFA0A1B0GWK0 134 aa19.55■□□□□ 0.72
UPF3A-206ENST00000480362 PPFIA4O75335 1185 aa19.55■□□□□ 0.72
UPF3A-206ENST00000480362 HMGCRP04035 888 aa19.55■□□□□ 0.72
UPF3A-206ENST00000480362 OATP04181 439 aa19.55■□□□□ 0.72
UPF3A-206ENST00000480362 IDEP14735 1019 aa19.55■□□□□ 0.72
UPF3A-206ENST00000480362 BMP6P22004 513 aa19.55■□□□□ 0.72
UPF3A-206ENST00000480362 NPEPPSP55786 919 aa19.55■□□□□ 0.72
UPF3A-206ENST00000480362 CACNB1Q02641 598 aaPredicted RBP19.55■□□□□ 0.72
UPF3A-206ENST00000480362 GIT2Q14161 759 aa19.55■□□□□ 0.72
UPF3A-206ENST00000480362 GSE1Q14687 1217 aa19.55■□□□□ 0.72
UPF3A-206ENST00000480362 ANO6Q4KMQ2 910 aa19.55■□□□□ 0.72
UPF3A-206ENST00000480362 UNC13DQ70J99 1090 aa19.55■□□□□ 0.72
UPF3A-206ENST00000480362 TLK2Q86UE8 772 aa19.55■□□□□ 0.72
UPF3A-206ENST00000480362 TRIM50Q86XT4 487 aa19.55■□□□□ 0.72
UPF3A-206ENST00000480362 SH2D3AQ9BRG2 576 aa19.55■□□□□ 0.72
UPF3A-206ENST00000480362 AP5M1Q9H0R1 490 aa19.55■□□□□ 0.72
UPF3A-206ENST00000480362 NRBP2Q9NSY0 501 aa19.55■□□□□ 0.72
UPF3A-206ENST00000480362 SEPT9Q9UHD8 586 aaPredicted RBP19.55■□□□□ 0.72
UPF3A-206ENST00000480362 MYH9P35579 1960 aaKnown RBP19.54■□□□□ 0.72
UPF3A-206ENST00000480362 LGALS2P05162 132 aa19.54■□□□□ 0.72
UPF3A-206ENST00000480362 MMP3P08254 477 aa19.54■□□□□ 0.72
UPF3A-206ENST00000480362 PRKAR2AP13861 404 aaKnown RBP19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms