RNA–Protein interactions for RNA: ENST00000480139.5

LIME1-205, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene LIME1, Length 819 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-205ENST00000480139 ERMNQ8TAM6 284 aa22.15■■□□□ 1.14
LIME1-205ENST00000480139 ZNF396Q96N95 335 aaPredicted RBP22.15■■□□□ 1.14
LIME1-205ENST00000480139 NRBP2Q9NSY0 501 aa22.15■■□□□ 1.14
LIME1-205ENST00000480139 TMEM39AQ9NV64 488 aa22.15■■□□□ 1.14
LIME1-205ENST00000480139 PRKAG2Q9UGJ0 569 aa22.15■■□□□ 1.14
LIME1-205ENST00000480139 NOD1Q9Y239 953 aa22.15■■□□□ 1.14
LIME1-205ENST00000480139 ZDHHC9Q9Y397 364 aa22.15■■□□□ 1.14
LIME1-205ENST00000480139 CLIC4Q9Y696 253 aa22.15■■□□□ 1.14
LIME1-205ENST00000480139 MBLAC1A4D2B0 266 aaPredicted RBP22.14■■□□□ 1.13
LIME1-205ENST00000480139 SLITRK3O94933 977 aa22.14■■□□□ 1.13
LIME1-205ENST00000480139 LYPLA2O95372 231 aa22.14■■□□□ 1.13
LIME1-205ENST00000480139 NASPP49321 788 aaPredicted RBP22.14■■□□□ 1.13
LIME1-205ENST00000480139 PTK7Q13308 1070 aa22.14■■□□□ 1.13
LIME1-205ENST00000480139 IL17AQ16552 155 aa22.14■■□□□ 1.13
LIME1-205ENST00000480139 FOXD4L5Q5VV16 416 aaPredicted RBP22.14■■□□□ 1.13
LIME1-205ENST00000480139 SERINC5Q86VE9 423 aa22.14■■□□□ 1.13
LIME1-205ENST00000480139 FOXD4L4Q8WXT5 416 aaPredicted RBP22.14■■□□□ 1.13
LIME1-205ENST00000480139 USP28Q96RU2 1077 aa22.14■■□□□ 1.13
LIME1-205ENST00000480139 LXNQ9BS40 222 aa22.14■■□□□ 1.13
LIME1-205ENST00000480139 POLR3CQ9BUI4 534 aaPredicted RBP22.14■■□□□ 1.13
LIME1-205ENST00000480139 FTOQ9C0B1 505 aaKnown RBP eCLIP22.14■■□□□ 1.13
LIME1-205ENST00000480139 ZSWIM4Q9H7M6 989 aa22.14■■□□□ 1.13
LIME1-205ENST00000480139 DAXXQ9UER7 740 aaPredicted RBP22.14■■□□□ 1.13
LIME1-205ENST00000480139 LRWD1Q9UFC0 647 aa22.14■■□□□ 1.13
LIME1-205ENST00000480139 TRIM43BA6NCK2 446 aa22.13■■□□□ 1.13
LIME1-205ENST00000480139 STBD1O95210 358 aa22.13■■□□□ 1.13
LIME1-205ENST00000480139 MUTP22033 750 aa22.13■■□□□ 1.13
LIME1-205ENST00000480139 RBL2Q08999 1139 aa22.13■■□□□ 1.13
LIME1-205ENST00000480139 MARCH8Q5T0T0 291 aa22.13■■□□□ 1.13
LIME1-205ENST00000480139 HAUS3Q68CZ6 603 aa22.13■■□□□ 1.13
LIME1-205ENST00000480139 SH3RF1Q7Z6J0 888 aa22.13■■□□□ 1.13
LIME1-205ENST00000480139 TRIM43Q96BQ3 446 aaPredicted RBP22.13■■□□□ 1.13
LIME1-205ENST00000480139 DYDC2Q96IM9 177 aa22.13■■□□□ 1.13
LIME1-205ENST00000480139 NIFKQ9BYG3 293 aaKnown RBP22.13■■□□□ 1.13
LIME1-205ENST00000480139 TUFT1Q9NNX1 390 aa22.13■■□□□ 1.13
LIME1-205ENST00000480139 PRDM5Q9NQX1 630 aaPredicted RBP22.13■■□□□ 1.13
LIME1-205ENST00000480139 RGL1Q9NZL6 768 aa22.13■■□□□ 1.13
LIME1-205ENST00000480139 TUBE1Q9UJT0 475 aa22.13■■□□□ 1.13
LIME1-205ENST00000480139 TANC1Q9C0D5 1861 aa22.13■■□□□ 1.13
LIME1-205ENST00000480139 ZBTB42B2RXF5 422 aa22.12■■□□□ 1.13
LIME1-205ENST00000480139 TREHO43280 583 aa22.12■■□□□ 1.13
LIME1-205ENST00000480139 RPA1P27694 616 aa22.12■■□□□ 1.13
LIME1-205ENST00000480139 NUCB2P80303 420 aa22.12■■□□□ 1.13
LIME1-205ENST00000480139 ZNF200P98182 395 aaPredicted RBP22.12■■□□□ 1.13
LIME1-205ENST00000480139 SLC39A14Q15043 492 aa22.12■■□□□ 1.13
LIME1-205ENST00000480139 CCDC155Q8N6L0 562 aa22.12■■□□□ 1.13
LIME1-205ENST00000480139 CAGE1Q8TC20 777 aa22.12■■□□□ 1.13
LIME1-205ENST00000480139 AK8Q96MA6 479 aa22.12■■□□□ 1.13
LIME1-205ENST00000480139 NOC4LQ9BVI4 516 aaKnown RBP22.12■■□□□ 1.13
LIME1-205ENST00000480139 TSHZ2Q9NRE2 1034 aa22.12■■□□□ 1.13
LIME1-205ENST00000480139 WRAP73Q9P2S5 460 aaPredicted RBP22.12■■□□□ 1.13
LIME1-205ENST00000480139 ATP6V1DQ9Y5K8 247 aa22.12■■□□□ 1.13
LIME1-205ENST00000480139 ARID2Q68CP9 1835 aa22.12■■□□□ 1.13
LIME1-205ENST00000480139 VWA3AA6NCI4 1184 aa22.11■■□□□ 1.13
LIME1-205ENST00000480139 PITPNM1O00562 1244 aa22.11■■□□□ 1.13
LIME1-205ENST00000480139 RPLP2P05387 115 aaKnown RBP22.11■■□□□ 1.13
LIME1-205ENST00000480139 SPATA31C1P0DKV0 1188 aa22.11■■□□□ 1.13
LIME1-205ENST00000480139 CYP2C9P11712 490 aa22.11■■□□□ 1.13
LIME1-205ENST00000480139 CYP4A11Q02928 519 aa22.11■■□□□ 1.13
LIME1-205ENST00000480139 TAF2Q6P1X5 1199 aa22.11■■□□□ 1.13
LIME1-205ENST00000480139 HIPK3Q9H422 1215 aa22.11■■□□□ 1.13
LIME1-205ENST00000480139 PPME1Q9Y570 386 aa22.11■■□□□ 1.13
LIME1-205ENST00000480139 CAND2O75155 1236 aa22.1■■□□□ 1.13
LIME1-205ENST00000480139 YEATS4O95619 227 aa22.1■■□□□ 1.13
LIME1-205ENST00000480139 TIMP1P01033 207 aa22.1■■□□□ 1.13
LIME1-205ENST00000480139 RAG1P15918 1043 aa22.1■■□□□ 1.13
LIME1-205ENST00000480139 BFSP2Q13515 415 aa22.1■■□□□ 1.13
LIME1-205ENST00000480139 CTTNQ14247 550 aaKnown RBP22.1■■□□□ 1.13
LIME1-205ENST00000480139 TARBP2Q15633 366 aaKnown RBP22.1■■□□□ 1.13
LIME1-205ENST00000480139 ANO5Q75V66 913 aa22.1■■□□□ 1.13
LIME1-205ENST00000480139 RPAINQ86UA6 219 aa22.1■■□□□ 1.13
LIME1-205ENST00000480139 CATSPER3Q86XQ3 398 aa22.1■■□□□ 1.13
LIME1-205ENST00000480139 TPH2Q8IWU9 490 aa22.1■■□□□ 1.13
LIME1-205ENST00000480139 LINC00301Q8NCQ3 95 aa22.1■■□□□ 1.13
LIME1-205ENST00000480139 DHX38Q92620 1227 aaKnown RBP22.1■■□□□ 1.13
LIME1-205ENST00000480139 SEPT9Q9UHD8 586 aaPredicted RBP22.1■■□□□ 1.13
LIME1-205ENST00000480139 RBM19Q9Y4C8 960 aaKnown RBP22.1■■□□□ 1.13
LIME1-205ENST00000480139 PCDHA2Q9Y5H9 948 aa22.1■■□□□ 1.13
LIME1-205ENST00000480139 SRPRBQ9Y5M8 271 aaKnown RBP22.1■■□□□ 1.13
LIME1-205ENST00000480139 LOXHD1Q8IVV2 1947 aa22.1■■□□□ 1.13
LIME1-205ENST00000480139 SLC26A4O43511 780 aa22.09■■□□□ 1.13
LIME1-205ENST00000480139 MED24O75448 989 aa22.09■■□□□ 1.13
LIME1-205ENST00000480139 XRCC6P12956 609 aaKnown RBP eCLIP22.09■■□□□ 1.13
LIME1-205ENST00000480139 YWHABP31946 246 aaKnown RBP22.09■■□□□ 1.13
LIME1-205ENST00000480139 LONP1P36776 959 aaKnown RBP22.09■■□□□ 1.13
LIME1-205ENST00000480139 IGBP1P78318 339 aa22.09■■□□□ 1.13
LIME1-205ENST00000480139 CEBPZQ03701 1054 aaKnown RBP22.09■■□□□ 1.13
LIME1-205ENST00000480139 TRIM71Q2Q1W2 868 aaKnown RBP22.09■■□□□ 1.13
LIME1-205ENST00000480139 KRT79Q5XKE5 535 aa22.09■■□□□ 1.13
LIME1-205ENST00000480139 MTHFD1LQ6UB35 978 aa22.09■■□□□ 1.13
LIME1-205ENST00000480139 OTUD6AQ7L8S5 288 aa22.09■■□□□ 1.13
LIME1-205ENST00000480139 TRAPPC12Q8WVT3 735 aa22.09■■□□□ 1.13
LIME1-205ENST00000480139 FBXO2Q9UK22 296 aaPredicted RBP22.09■■□□□ 1.13
LIME1-205ENST00000480139 CFAP45Q9UL16 551 aa22.09■■□□□ 1.13
LIME1-205ENST00000480139 ZMYND8Q9ULU4 1186 aaPredicted RBP22.09■■□□□ 1.13
LIME1-205ENST00000480139 CIZ1Q9ULV3 898 aaPredicted RBP22.09■■□□□ 1.13
LIME1-205ENST00000480139 SMIM35A0A1B0GVV1 85 aa22.08■■□□□ 1.13
LIME1-205ENST00000480139 DDX11L8A8MPP1 907 aa22.08■■□□□ 1.13
LIME1-205ENST00000480139 H0YGN5 161 aa22.08■■□□□ 1.13
LIME1-205ENST00000480139 MAGEB2O15479 319 aa22.08■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms