RNA–Protein interactions for RNA: ENST00000480058.5

PRPF4B-205, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 1 (best)

Gene PRPF4B, Length 6,775 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-205ENST00000480058 POC1B-GALNT4F8VUJ3 575 aa6.6□□□□□ -1.35
PRPF4B-205ENST00000480058 TBX3O15119 743 aa6.6□□□□□ -1.35
PRPF4B-205ENST00000480058 ASAP2O43150 1006 aa6.6□□□□□ -1.35
PRPF4B-205ENST00000480058 ORC4O43929 436 aa6.6□□□□□ -1.35
PRPF4B-205ENST00000480058 KRT16P08779 473 aa6.6□□□□□ -1.35
PRPF4B-205ENST00000480058 ATP2C1P98194 919 aaPredicted RBP6.6□□□□□ -1.35
PRPF4B-205ENST00000480058 TOB2Q14106 344 aaPredicted RBP6.6□□□□□ -1.35
PRPF4B-205ENST00000480058 TBCCQ15814 346 aa6.6□□□□□ -1.35
PRPF4B-205ENST00000480058 PFKFB3Q16875 520 aaPredicted RBP6.6□□□□□ -1.35
PRPF4B-205ENST00000480058 CCDC144BQ3MJ40 725 aa6.6□□□□□ -1.35
PRPF4B-205ENST00000480058 TAF1BQ53T94 588 aaPredicted RBP6.6□□□□□ -1.35
PRPF4B-205ENST00000480058 ZNF594Q96JF6 807 aaPredicted RBP6.6□□□□□ -1.35
PRPF4B-205ENST00000480058 CNPY3Q9BT09 278 aa6.6□□□□□ -1.35
PRPF4B-205ENST00000480058 TRAIPQ9BWF2 469 aa6.6□□□□□ -1.35
PRPF4B-205ENST00000480058 PICK1Q9NRD5 415 aa6.6□□□□□ -1.35
PRPF4B-205ENST00000480058 KCND2Q9NZV8 630 aa6.6□□□□□ -1.35
PRPF4B-205ENST00000480058 TPX2Q9ULW0 747 aaKnown RBP6.6□□□□□ -1.35
PRPF4B-205ENST00000480058 RPL26L1Q9UNX3 145 aaKnown RBP6.6□□□□□ -1.35
PRPF4B-205ENST00000480058 PARP3Q9Y6F1 533 aa6.6□□□□□ -1.35
PRPF4B-205ENST00000480058 ATP7AQ04656 1500 aa6.6□□□□□ -1.35
PRPF4B-205ENST00000480058 DISP1Q96F81 1524 aa6.6□□□□□ -1.35
PRPF4B-205ENST00000480058 TTLL1O95922 423 aa6.6□□□□□ -1.35
PRPF4B-205ENST00000480058 GGCXP38435 758 aa6.6□□□□□ -1.35
PRPF4B-205ENST00000480058 CDR2Q01850 454 aa6.6□□□□□ -1.35
PRPF4B-205ENST00000480058 TAF12Q16514 161 aa6.6□□□□□ -1.35
PRPF4B-205ENST00000480058 FAM160B1Q5W0V3 765 aa6.6□□□□□ -1.35
PRPF4B-205ENST00000480058 FRMD5Q7Z6J6 570 aa6.6□□□□□ -1.35
PRPF4B-205ENST00000480058 SESTD1Q86VW0 696 aa6.6□□□□□ -1.35
PRPF4B-205ENST00000480058 FAM212AQ96EL1 285 aa6.6□□□□□ -1.35
PRPF4B-205ENST00000480058 WDR35Q9P2L0 1181 aa6.6□□□□□ -1.35
PRPF4B-205ENST00000480058 RASA4BC9J798 803 aa6.6□□□□□ -1.35
PRPF4B-205ENST00000480058 RASA4O43374 803 aa6.6□□□□□ -1.35
PRPF4B-205ENST00000480058 VPS41P49754 854 aa6.6□□□□□ -1.35
PRPF4B-205ENST00000480058 PPP2R5CQ13362 524 aa6.6□□□□□ -1.35
PRPF4B-205ENST00000480058 SLC18A3Q16572 532 aa6.6□□□□□ -1.35
PRPF4B-205ENST00000480058 CYP4F22Q6NT55 531 aa6.6□□□□□ -1.35
PRPF4B-205ENST00000480058 MAPKAPK5Q8IW41 473 aa6.6□□□□□ -1.35
PRPF4B-205ENST00000480058 STAG2Q8N3U4 1231 aa6.6□□□□□ -1.35
PRPF4B-205ENST00000480058 APBB2Q92870 758 aa6.6□□□□□ -1.35
PRPF4B-205ENST00000480058 GCOM2Q9BZD3 368 aaPredicted RBP6.6□□□□□ -1.35
PRPF4B-205ENST00000480058 ZSWIM5Q9P217 1185 aa6.6□□□□□ -1.35
PRPF4B-205ENST00000480058 DYTNA2CJ06 578 aa6.59□□□□□ -1.35
PRPF4B-205ENST00000480058 STXBP3O00186 592 aa6.59□□□□□ -1.35
PRPF4B-205ENST00000480058 SH3BP5O60239 455 aa6.59□□□□□ -1.35
PRPF4B-205ENST00000480058 TBXAS1P24557 533 aaPredicted RBP6.59□□□□□ -1.35
PRPF4B-205ENST00000480058 HSPA13P48723 471 aa6.59□□□□□ -1.35
PRPF4B-205ENST00000480058 IRX5P78411 483 aaPredicted RBP6.59□□□□□ -1.35
PRPF4B-205ENST00000480058 GRAMD1BQ3KR37 738 aa6.59□□□□□ -1.35
PRPF4B-205ENST00000480058 RARS2Q5T160 578 aaKnown RBP6.59□□□□□ -1.35
PRPF4B-205ENST00000480058 LRRC8BQ6P9F7 803 aa6.59□□□□□ -1.35
PRPF4B-205ENST00000480058 ADSSL1Q8N142 457 aa6.59□□□□□ -1.35
PRPF4B-205ENST00000480058 TBCKQ8TEA7 893 aa6.59□□□□□ -1.35
PRPF4B-205ENST00000480058 THOC1Q96FV9 657 aaKnown RBP6.59□□□□□ -1.35
PRPF4B-205ENST00000480058 ZNF512BQ96KM6 892 aaPredicted RBP6.59□□□□□ -1.35
PRPF4B-205ENST00000480058 BFARQ9NZS9 450 aa6.59□□□□□ -1.35
PRPF4B-205ENST00000480058 GCNT4Q9P109 453 aa6.59□□□□□ -1.35
PRPF4B-205ENST00000480058 CCPG1Q9ULG6 757 aa6.59□□□□□ -1.35
PRPF4B-205ENST00000480058 USP15Q9Y4E8 981 aaPredicted RBP6.59□□□□□ -1.35
PRPF4B-205ENST00000480058 ESYT2A0FGR8 921 aa6.59□□□□□ -1.35
PRPF4B-205ENST00000480058 C16orf96A6NNT2 1141 aa6.59□□□□□ -1.35
PRPF4B-205ENST00000480058 PLA2G4BP0C869 781 aa6.59□□□□□ -1.35
PRPF4B-205ENST00000480058 IFNA8P32881 189 aa6.59□□□□□ -1.35
PRPF4B-205ENST00000480058 PMS2P54278 862 aa6.59□□□□□ -1.35
PRPF4B-205ENST00000480058 YARSP54577 528 aaKnown RBP6.59□□□□□ -1.35
PRPF4B-205ENST00000480058 VSNL1P62760 191 aa6.59□□□□□ -1.35
PRPF4B-205ENST00000480058 MED21Q13503 144 aa6.59□□□□□ -1.35
PRPF4B-205ENST00000480058 PLS1Q14651 629 aa6.59□□□□□ -1.35
PRPF4B-205ENST00000480058 TRMT1LQ7Z2T5 733 aaKnown RBP6.59□□□□□ -1.35
PRPF4B-205ENST00000480058 ZNF589Q86UQ0 364 aaPredicted RBP6.59□□□□□ -1.35
PRPF4B-205ENST00000480058 ATL2Q8NHH9 583 aa6.59□□□□□ -1.35
PRPF4B-205ENST00000480058 TBC1D7Q9P0N9 293 aa6.59□□□□□ -1.35
PRPF4B-205ENST00000480058 XDHP47989 1333 aa6.59□□□□□ -1.35
PRPF4B-205ENST00000480058 UBN2Q6ZU65 1347 aa6.59□□□□□ -1.35
PRPF4B-205ENST00000480058 O00370 1275 aa6.59□□□□□ -1.35
PRPF4B-205ENST00000480058 SLC16A3O15427 465 aaKnown RBP6.59□□□□□ -1.35
PRPF4B-205ENST00000480058 CHMP2AO43633 222 aa6.59□□□□□ -1.35
PRPF4B-205ENST00000480058 SRGNP10124 158 aa6.59□□□□□ -1.35
PRPF4B-205ENST00000480058 PLCG1P19174 1290 aa6.59□□□□□ -1.35
PRPF4B-205ENST00000480058 EXOSC10Q01780 885 aaKnown RBP6.59□□□□□ -1.35
PRPF4B-205ENST00000480058 SATB1Q01826 763 aa6.59□□□□□ -1.35
PRPF4B-205ENST00000480058 BBS9Q3SYG4 887 aa6.59□□□□□ -1.35
PRPF4B-205ENST00000480058 SPATA21Q7Z572 469 aa6.59□□□□□ -1.35
PRPF4B-205ENST00000480058 RHOT1Q8IXI2 618 aa6.59□□□□□ -1.35
PRPF4B-205ENST00000480058 XPO6Q96QU8 1125 aaKnown RBP6.59□□□□□ -1.35
PRPF4B-205ENST00000480058 RANBP17Q9H2T7 1088 aaKnown RBP6.59□□□□□ -1.35
PRPF4B-205ENST00000480058 ST7Q9NRC1 585 aa6.59□□□□□ -1.35
PRPF4B-205ENST00000480058 KCND1Q9NSA2 647 aa6.59□□□□□ -1.35
PRPF4B-205ENST00000480058 TBC1D22BQ9NU19 505 aa6.59□□□□□ -1.35
PRPF4B-205ENST00000480058 BIN2Q9UBW5 565 aaPredicted RBP6.59□□□□□ -1.35
PRPF4B-205ENST00000480058 MAD1L1Q9Y6D9 718 aa6.59□□□□□ -1.35
PRPF4B-205ENST00000480058 GOLGA8JA6NMD2 632 aa6.59□□□□□ -1.35
PRPF4B-205ENST00000480058 RHOBTB3O94955 611 aa6.59□□□□□ -1.35
PRPF4B-205ENST00000480058 HARSP12081 509 aaKnown RBP6.59□□□□□ -1.35
PRPF4B-205ENST00000480058 TAC1P20366 129 aa6.59□□□□□ -1.35
PRPF4B-205ENST00000480058 HSPA9P38646 679 aaKnown RBP6.59□□□□□ -1.35
PRPF4B-205ENST00000480058 USP11P51784 963 aa6.59□□□□□ -1.35
PRPF4B-205ENST00000480058 NR5A1Q13285 461 aa6.59□□□□□ -1.35
PRPF4B-205ENST00000480058 STILQ15468 1287 aa6.59□□□□□ -1.35
PRPF4B-205ENST00000480058 UGP2Q16851 508 aa6.59□□□□□ -1.35
PRPF4B-205ENST00000480058 RABL6Q3YEC7 729 aaPredicted RBP6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms