RNA–Protein interactions for RNA: ENST00000479542.1

ABCF1-206, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 2

Gene ABCF1, Length 893 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-206ENST00000479542 PADI3Q9ULW8 664 aa15.21■□□□□ 0.03
ABCF1-206ENST00000479542 MEIS1O00470 390 aa15.2■□□□□ 0.02
ABCF1-206ENST00000479542 MARK3P27448 753 aa15.2■□□□□ 0.02
ABCF1-206ENST00000479542 IRS1P35568 1242 aa15.2■□□□□ 0.02
ABCF1-206ENST00000479542 RCAN1P53805 252 aa15.2■□□□□ 0.02
ABCF1-206ENST00000479542 ACTR2P61160 394 aa15.2■□□□□ 0.02
ABCF1-206ENST00000479542 COASYQ13057 564 aa15.2■□□□□ 0.02
ABCF1-206ENST00000479542 PLCB4Q15147 1175 aa15.2■□□□□ 0.02
ABCF1-206ENST00000479542 CEP55Q53EZ4 464 aa15.2■□□□□ 0.02
ABCF1-206ENST00000479542 BMP8AQ7Z5Y6 402 aa15.2■□□□□ 0.02
ABCF1-206ENST00000479542 EFHBQ8N7U6 833 aa15.2■□□□□ 0.02
ABCF1-206ENST00000479542 LINC01599Q8WXQ3 324 aa15.2■□□□□ 0.02
ABCF1-206ENST00000479542 SLC27A2O14975 620 aa15.19■□□□□ 0.02
ABCF1-206ENST00000479542 HBP1O60381 514 aa15.19■□□□□ 0.02
ABCF1-206ENST00000479542 CD52P31358 61 aa15.19■□□□□ 0.02
ABCF1-206ENST00000479542 AP3B2Q13367 1082 aa15.19■□□□□ 0.02
ABCF1-206ENST00000479542 PKN1Q16512 942 aa15.19■□□□□ 0.02
ABCF1-206ENST00000479542 UBE2SQ16763 222 aa15.19■□□□□ 0.02
ABCF1-206ENST00000479542 TSGA10IPQ3SY00 556 aa15.19■□□□□ 0.02
ABCF1-206ENST00000479542 MCTP2Q6DN12 878 aa15.19■□□□□ 0.02
ABCF1-206ENST00000479542 PDE12Q6L8Q7 609 aaKnown RBP15.19■□□□□ 0.02
ABCF1-206ENST00000479542 SYNE3Q6ZMZ3 975 aa15.19■□□□□ 0.02
ABCF1-206ENST00000479542 ZNF710Q8N1W2 664 aa15.19■□□□□ 0.02
ABCF1-206ENST00000479542 CD207Q9UJ71 328 aa15.19■□□□□ 0.02
ABCF1-206ENST00000479542 COL1A2P08123 1366 aa15.19■□□□□ 0.02
ABCF1-206ENST00000479542 ITGB1P05556 798 aa15.18■□□□□ 0.02
ABCF1-206ENST00000479542 SCG2P13521 617 aa15.18■□□□□ 0.02
ABCF1-206ENST00000479542 SREBF1P36956 1147 aa15.18■□□□□ 0.02
ABCF1-206ENST00000479542 CLK2P49760 499 aaKnown RBP15.18■□□□□ 0.02
ABCF1-206ENST00000479542 KRT76Q01546 638 aa15.18■□□□□ 0.02
ABCF1-206ENST00000479542 DLX2Q07687 328 aaPredicted RBP15.18■□□□□ 0.02
ABCF1-206ENST00000479542 FUT2Q10981 343 aa15.18■□□□□ 0.02
ABCF1-206ENST00000479542 CREB3L3Q68CJ9 461 aa15.18■□□□□ 0.02
ABCF1-206ENST00000479542 MTHFD1LQ6UB35 978 aa15.18■□□□□ 0.02
ABCF1-206ENST00000479542 CMTR1Q8N1G2 835 aaKnown RBP15.18■□□□□ 0.02
ABCF1-206ENST00000479542 SMRP1Q8NCR6 262 aa15.18■□□□□ 0.02
ABCF1-206ENST00000479542 MFSD14AQ96MC6 490 aa15.18■□□□□ 0.02
ABCF1-206ENST00000479542 ESYT1Q9BSJ8 1104 aa15.18■□□□□ 0.02
ABCF1-206ENST00000479542 C1orf112Q9NSG2 853 aa15.18■□□□□ 0.02
ABCF1-206ENST00000479542 TRPC6Q9Y210 931 aa15.18■□□□□ 0.02
ABCF1-206ENST00000479542 MRPL42Q9Y6G3 142 aaKnown RBP15.18■□□□□ 0.02
ABCF1-206ENST00000479542 TBX10O75333 385 aa15.17■□□□□ 0.02
ABCF1-206ENST00000479542 SARSP49591 514 aaKnown RBP15.17■□□□□ 0.02
ABCF1-206ENST00000479542 IGBP1P78318 339 aa15.17■□□□□ 0.02
ABCF1-206ENST00000479542 FAM189BP81408 668 aa15.17■□□□□ 0.02
ABCF1-206ENST00000479542 EXOSC10Q01780 885 aaKnown RBP15.17■□□□□ 0.02
ABCF1-206ENST00000479542 PAK2Q13177 524 aa15.17■□□□□ 0.02
ABCF1-206ENST00000479542 CBX2Q14781 532 aaPredicted RBP15.17■□□□□ 0.02
ABCF1-206ENST00000479542 RNF20Q5VTR2 975 aa15.17■□□□□ 0.02
ABCF1-206ENST00000479542 APOA5Q6Q788 366 aa15.17■□□□□ 0.02
ABCF1-206ENST00000479542 ABHD15Q6UXT9 468 aa15.17■□□□□ 0.02
ABCF1-206ENST00000479542 EP400NLQ6ZTU2 488 aa15.17■□□□□ 0.02
ABCF1-206ENST00000479542 HEATR3Q7Z4Q2 680 aa15.17■□□□□ 0.02
ABCF1-206ENST00000479542 KLHL23Q8NBE8 558 aa15.17■□□□□ 0.02
ABCF1-206ENST00000479542 EDAQ92838 391 aa15.17■□□□□ 0.02
ABCF1-206ENST00000479542 CDCA3Q99618 268 aaPredicted RBP15.17■□□□□ 0.02
ABCF1-206ENST00000479542 ELAC1Q9H777 363 aaKnown RBP15.17■□□□□ 0.02
ABCF1-206ENST00000479542 AGO4Q9HCK5 861 aaKnown RBP15.17■□□□□ 0.02
ABCF1-206ENST00000479542 ALG13Q9NP73 1137 aaKnown RBP15.17■□□□□ 0.02
ABCF1-206ENST00000479542 RGS18Q9NS28 235 aa15.17■□□□□ 0.02
ABCF1-206ENST00000479542 BARHL2Q9NY43 387 aa15.17■□□□□ 0.02
ABCF1-206ENST00000479542 ATG2AQ2TAZ0 1938 aa15.17■□□□□ 0.02
ABCF1-206ENST00000479542 GPR182O15218 404 aa15.16■□□□□ 0.02
ABCF1-206ENST00000479542 CYP3A4P08684 503 aa15.16■□□□□ 0.02
ABCF1-206ENST00000479542 ARP10275 920 aa15.16■□□□□ 0.02
ABCF1-206ENST00000479542 RXRAP19793 462 aa15.16■□□□□ 0.02
ABCF1-206ENST00000479542 KCNA4P22459 653 aa15.16■□□□□ 0.02
ABCF1-206ENST00000479542 DNAJB1P25685 340 aa15.16■□□□□ 0.02
ABCF1-206ENST00000479542 ITGB3BPQ13352 177 aaPredicted RBP15.16■□□□□ 0.02
ABCF1-206ENST00000479542 ZNF484Q5JVG2 852 aa15.16■□□□□ 0.02
ABCF1-206ENST00000479542 WWC2Q6AWC2 1192 aa15.16■□□□□ 0.02
ABCF1-206ENST00000479542 SLC24A5Q71RS6 500 aa15.16■□□□□ 0.02
ABCF1-206ENST00000479542 RNF135Q8IUD6 432 aa15.16■□□□□ 0.02
ABCF1-206ENST00000479542 KIAA0319LQ8IZA0 1049 aa15.16■□□□□ 0.02
ABCF1-206ENST00000479542 CYP2W1Q8TAV3 490 aa15.16■□□□□ 0.02
ABCF1-206ENST00000479542 ATP8B4Q8TF62 1192 aa15.16■□□□□ 0.02
ABCF1-206ENST00000479542 POF1BQ8WVV4 589 aa15.16■□□□□ 0.02
ABCF1-206ENST00000479542 CRYGNQ8WXF5 182 aa15.16■□□□□ 0.02
ABCF1-206ENST00000479542 FAM49AQ9H0Q0 323 aaPredicted RBP15.16■□□□□ 0.02
ABCF1-206ENST00000479542 TMX1Q9H3N1 280 aa15.16■□□□□ 0.02
ABCF1-206ENST00000479542 ERVK-5Q9HDB9 667 aa15.16■□□□□ 0.02
ABCF1-206ENST00000479542 AAASQ9NRG9 546 aa15.16■□□□□ 0.02
ABCF1-206ENST00000479542 CLEC1BQ9P126 229 aa15.16■□□□□ 0.02
ABCF1-206ENST00000479542 LZTS1Q9Y250 596 aa15.16■□□□□ 0.02
ABCF1-206ENST00000479542 PCDHB7Q9Y5E2 793 aa15.16■□□□□ 0.02
ABCF1-206ENST00000479542 CNTNAP5Q8WYK1 1306 aa15.16■□□□□ 0.02
ABCF1-206ENST00000479542 LOC730098B7Z3J9 87 aa15.15■□□□□ 0.02
ABCF1-206ENST00000479542 RBAK-RBAKDNI3L0D1 243 aa15.15■□□□□ 0.02
ABCF1-206ENST00000479542 STXBP3O00186 592 aa15.15■□□□□ 0.02
ABCF1-206ENST00000479542 ATF7P17544 494 aaPredicted RBP15.15■□□□□ 0.02
ABCF1-206ENST00000479542 KLRC1P26715 233 aa15.15■□□□□ 0.02
ABCF1-206ENST00000479542 FAM160B1Q5W0V3 765 aa15.15■□□□□ 0.02
ABCF1-206ENST00000479542 TYW1BQ6NUM6 668 aa15.15■□□□□ 0.02
ABCF1-206ENST00000479542 TMEM184AQ6ZMB5 413 aa15.15■□□□□ 0.02
ABCF1-206ENST00000479542 CCDC82Q8N4S0 544 aa15.15■□□□□ 0.02
ABCF1-206ENST00000479542 RASGRP4Q8TDF6 673 aa15.15■□□□□ 0.02
ABCF1-206ENST00000479542 PRRX2Q99811 253 aa15.15■□□□□ 0.02
ABCF1-206ENST00000479542 ANO3Q9BYT9 981 aa15.15■□□□□ 0.02
ABCF1-206ENST00000479542 TBC1D22BQ9NU19 505 aa15.15■□□□□ 0.02
ABCF1-206ENST00000479542 LRFN2Q9ULH4 789 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms