RNA–Protein interactions for RNA: ENST00000478596.5

USP11-207, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 970 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-207ENST00000478596 TTC14Q96N46 770 aa16.63■□□□□ 0.25
USP11-207ENST00000478596 TAAR1Q96RJ0 339 aa16.63■□□□□ 0.25
USP11-207ENST00000478596 RNPEPQ9H4A4 650 aa16.63■□□□□ 0.25
USP11-207ENST00000478596 GOLGA8AA7E2F4 631 aa16.62■□□□□ 0.25
USP11-207ENST00000478596 H3BRB1 525 aa16.62■□□□□ 0.25
USP11-207ENST00000478596 PER2O15055 1255 aa16.62■□□□□ 0.25
USP11-207ENST00000478596 SRGAP2BP0DMP2 458 aa16.62■□□□□ 0.25
USP11-207ENST00000478596 UBE3AQ05086 875 aa16.62■□□□□ 0.25
USP11-207ENST00000478596 SEC23AQ15436 765 aa16.62■□□□□ 0.25
USP11-207ENST00000478596 CWF19L1Q69YN2 538 aaKnown RBP16.62■□□□□ 0.25
USP11-207ENST00000478596 HSCBQ8IWL3 235 aa16.62■□□□□ 0.25
USP11-207ENST00000478596 ZNF654Q8IZM8 581 aa16.62■□□□□ 0.25
USP11-207ENST00000478596 CRIPAKQ8N1N5 446 aa16.62■□□□□ 0.25
USP11-207ENST00000478596 CTCFLQ8NI51 663 aaPredicted RBP16.62■□□□□ 0.25
USP11-207ENST00000478596 SYTL5Q8TDW5 730 aaPredicted RBP16.62■□□□□ 0.25
USP11-207ENST00000478596 SPATA33Q96N06 139 aa16.62■□□□□ 0.25
USP11-207ENST00000478596 RMDN3Q96TC7 470 aa16.62■□□□□ 0.25
USP11-207ENST00000478596 KIF2CQ99661 725 aa16.62■□□□□ 0.25
USP11-207ENST00000478596 MYL10Q9BUA6 226 aa16.62■□□□□ 0.25
USP11-207ENST00000478596 TUT1Q9H6E5 874 aaKnown RBP16.62■□□□□ 0.25
USP11-207ENST00000478596 EHMT1Q9H9B1 1298 aa16.62■□□□□ 0.25
USP11-207ENST00000478596 COL20A1Q9P218 1284 aa16.62■□□□□ 0.25
USP11-207ENST00000478596 ZBTB43O43298 467 aa16.61■□□□□ 0.25
USP11-207ENST00000478596 DDAH1O94760 285 aa16.61■□□□□ 0.25
USP11-207ENST00000478596 CALM1P0DP23 149 aa16.61■□□□□ 0.25
USP11-207ENST00000478596 CALM2P0DP24 149 aa16.61■□□□□ 0.25
USP11-207ENST00000478596 CALM3P0DP25 149 aa16.61■□□□□ 0.25
USP11-207ENST00000478596 GNAT1P11488 350 aa16.61■□□□□ 0.25
USP11-207ENST00000478596 AOC1P19801 751 aa16.61■□□□□ 0.25
USP11-207ENST00000478596 SP100P23497 879 aaPredicted RBP16.61■□□□□ 0.25
USP11-207ENST00000478596 LIFRP42702 1097 aa16.61■□□□□ 0.25
USP11-207ENST00000478596 STK3Q13188 491 aa16.61■□□□□ 0.25
USP11-207ENST00000478596 ST3GAL2Q16842 350 aa16.61■□□□□ 0.25
USP11-207ENST00000478596 CELF3Q5SZQ8 465 aaKnown RBP16.61■□□□□ 0.25
USP11-207ENST00000478596 ANKRD54Q6NXT1 300 aa16.61■□□□□ 0.25
USP11-207ENST00000478596 SYCE2Q6PIF2 218 aa16.61■□□□□ 0.25
USP11-207ENST00000478596 IGDCC4Q8TDY8 1250 aa16.61■□□□□ 0.25
USP11-207ENST00000478596 LARP6Q9BRS8 491 aaKnown RBP16.61■□□□□ 0.25
USP11-207ENST00000478596 SMOC2Q9H3U7 446 aa16.61■□□□□ 0.25
USP11-207ENST00000478596 SENP2Q9HC62 589 aa16.61■□□□□ 0.25
USP11-207ENST00000478596 GPCPD1Q9NPB8 672 aa16.61■□□□□ 0.25
USP11-207ENST00000478596 FRMPD2Q68DX3 1309 aaPredicted RBP16.61■□□□□ 0.25
USP11-207ENST00000478596 ATRXP46100 2492 aa16.61■□□□□ 0.25
USP11-207ENST00000478596 DHX16O60231 1041 aaKnown RBP16.6■□□□□ 0.25
USP11-207ENST00000478596 CHRNA1P02708 482 aa16.6■□□□□ 0.25
USP11-207ENST00000478596 HOXB8P17481 243 aaPredicted RBP16.6■□□□□ 0.25
USP11-207ENST00000478596 RXRAP19793 462 aa16.6■□□□□ 0.25
USP11-207ENST00000478596 ANP32AP39687 249 aaKnown RBP16.6■□□□□ 0.25
USP11-207ENST00000478596 METAP2P50579 478 aaKnown RBP eCLIP16.6■□□□□ 0.25
USP11-207ENST00000478596 TOB2Q14106 344 aaPredicted RBP16.6■□□□□ 0.25
USP11-207ENST00000478596 KCNV1Q6PIU1 500 aa16.6■□□□□ 0.25
USP11-207ENST00000478596 APOA5Q6Q788 366 aa16.6■□□□□ 0.25
USP11-207ENST00000478596 DTWD2Q8NBA8 298 aa16.6■□□□□ 0.25
USP11-207ENST00000478596 RASGRP4Q8TDF6 673 aa16.6■□□□□ 0.25
USP11-207ENST00000478596 MICAL1Q8TDZ2 1067 aa16.6■□□□□ 0.25
USP11-207ENST00000478596 TSHZ2Q9NRE2 1034 aa16.6■□□□□ 0.25
USP11-207ENST00000478596 C2CD4DB7Z1M9 353 aa16.59■□□□□ 0.25
USP11-207ENST00000478596 PARP1P09874 1014 aaKnown RBP16.59■□□□□ 0.25
USP11-207ENST00000478596 GHRP10912 638 aa16.59■□□□□ 0.25
USP11-207ENST00000478596 KIF5BP33176 963 aa16.59■□□□□ 0.25
USP11-207ENST00000478596 TECP42680 631 aa16.59■□□□□ 0.25
USP11-207ENST00000478596 MCM2P49736 904 aa16.59■□□□□ 0.25
USP11-207ENST00000478596 ADAM17P78536 824 aa16.59■□□□□ 0.25
USP11-207ENST00000478596 LPIN1Q14693 890 aa16.59■□□□□ 0.25
USP11-207ENST00000478596 PDE12Q6L8Q7 609 aaKnown RBP16.59■□□□□ 0.25
USP11-207ENST00000478596 SGMS1Q86VZ5 419 aa16.59■□□□□ 0.25
USP11-207ENST00000478596 TBC1D5Q92609 795 aa16.59■□□□□ 0.25
USP11-207ENST00000478596 NECTIN4Q96NY8 510 aa16.59■□□□□ 0.25
USP11-207ENST00000478596 OTOGLQ3ZCN5 2332 aa16.58■□□□□ 0.25
USP11-207ENST00000478596 USP24Q9UPU5 2620 aa16.58■□□□□ 0.25
USP11-207ENST00000478596 CPLX1O14810 134 aa16.58■□□□□ 0.24
USP11-207ENST00000478596 PI15O43692 258 aa16.58■□□□□ 0.24
USP11-207ENST00000478596 GGPS1O95749 300 aa16.58■□□□□ 0.24
USP11-207ENST00000478596 NR3C2P08235 984 aa16.58■□□□□ 0.24
USP11-207ENST00000478596 PDHBP11177 359 aa16.58■□□□□ 0.24
USP11-207ENST00000478596 RTN1Q16799 776 aa16.58■□□□□ 0.24
USP11-207ENST00000478596 USH1GQ495M9 461 aa16.58■□□□□ 0.24
USP11-207ENST00000478596 ASPRV1Q53RT3 343 aa16.58■□□□□ 0.24
USP11-207ENST00000478596 ARHGEF16Q5VV41 709 aa16.58■□□□□ 0.24
USP11-207ENST00000478596 FLCNQ8NFG4 579 aa16.58■□□□□ 0.24
USP11-207ENST00000478596 CYP2W1Q8TAV3 490 aa16.58■□□□□ 0.24
USP11-207ENST00000478596 RUBCNQ92622 972 aa16.58■□□□□ 0.24
USP11-207ENST00000478596 RTP3Q9BQQ7 232 aa16.58■□□□□ 0.24
USP11-207ENST00000478596 SLKQ9H2G2 1235 aaPredicted RBP16.58■□□□□ 0.24
USP11-207ENST00000478596 SETD4Q9NVD3 440 aa16.58■□□□□ 0.24
USP11-207ENST00000478596 LIMCH1Q9UPQ0 1083 aa16.58■□□□□ 0.24
USP11-207ENST00000478596 KIAA1217Q5T5P2 1943 aa16.58■□□□□ 0.24
USP11-207ENST00000478596 TTC3P53804 2025 aa16.58■□□□□ 0.24
USP11-207ENST00000478596 MAP1BP46821 2468 aaKnown RBP16.57■□□□□ 0.24
USP11-207ENST00000478596 LGALS2P05162 132 aa16.57■□□□□ 0.24
USP11-207ENST00000478596 NPR3P17342 541 aa16.57■□□□□ 0.24
USP11-207ENST00000478596 EIF2AK2P19525 551 aaKnown RBP16.57■□□□□ 0.24
USP11-207ENST00000478596 ZNF543Q08ER8 600 aa16.57■□□□□ 0.24
USP11-207ENST00000478596 RSPO4Q2I0M5 234 aaPredicted RBP16.57■□□□□ 0.24
USP11-207ENST00000478596 CPLX2Q6PUV4 134 aaKnown RBP16.57■□□□□ 0.24
USP11-207ENST00000478596 MCF2L2Q86YR7 1114 aa16.57■□□□□ 0.24
USP11-207ENST00000478596 NPAS4Q8IUM7 802 aa16.57■□□□□ 0.24
USP11-207ENST00000478596 ZDHHC14Q8IZN3 488 aa16.57■□□□□ 0.24
USP11-207ENST00000478596 LINC01599Q8WXQ3 324 aa16.57■□□□□ 0.24
USP11-207ENST00000478596 BRPF3Q9ULD4 1205 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms