RNA–Protein interactions for RNA: ENST00000478573.6

CDC42BPA-212, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-212ENST00000478573 ZNF341Q9BYN7 854 aa5.89□□□□□ -1.47
CDC42BPA-212ENST00000478573 SEMA4AQ9H3S1 761 aa5.89□□□□□ -1.47
CDC42BPA-212ENST00000478573 CATSPERZQ9NTU4 200 aa5.89□□□□□ -1.47
CDC42BPA-212ENST00000478573 ZFR2Q9UPR6 939 aaKnown RBP5.89□□□□□ -1.47
CDC42BPA-212ENST00000478573 HS3ST3A1Q9Y663 406 aa5.89□□□□□ -1.47
CDC42BPA-212ENST00000478573 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP5.88□□□□□ -1.47
CDC42BPA-212ENST00000478573 TCRBV5S4A2TA0A5A2 114 aa5.88□□□□□ -1.47
CDC42BPA-212ENST00000478573 DBPQ10586 325 aaPredicted RBP5.88□□□□□ -1.47
CDC42BPA-212ENST00000478573 PAK1Q13153 545 aa5.88□□□□□ -1.47
CDC42BPA-212ENST00000478573 ARHGAP36Q6ZRI8 547 aa5.88□□□□□ -1.47
CDC42BPA-212ENST00000478573 SPATC1Q76KD6 591 aa5.88□□□□□ -1.47
CDC42BPA-212ENST00000478573 SH3TC2Q8TF17 1288 aa5.88□□□□□ -1.47
CDC42BPA-212ENST00000478573 NEIL1Q96FI4 390 aaPredicted RBP5.88□□□□□ -1.47
CDC42BPA-212ENST00000478573 MRIQ9BWK5 157 aa5.88□□□□□ -1.47
CDC42BPA-212ENST00000478573 SPATA9Q9BWV2 254 aa5.88□□□□□ -1.47
CDC42BPA-212ENST00000478573 CARD11Q9BXL7 1154 aa5.88□□□□□ -1.47
CDC42BPA-212ENST00000478573 PFDN2Q9UHV9 154 aa5.88□□□□□ -1.47
CDC42BPA-212ENST00000478573 CYR61O00622 381 aa5.87□□□□□ -1.47
CDC42BPA-212ENST00000478573 SRGAP2CP0DJJ0 459 aa5.87□□□□□ -1.47
CDC42BPA-212ENST00000478573 PTPN1P18031 435 aaKnown RBP5.87□□□□□ -1.47
CDC42BPA-212ENST00000478573 RAC3P60763 192 aa5.87□□□□□ -1.47
CDC42BPA-212ENST00000478573 WDR72Q3MJ13 1102 aa5.87□□□□□ -1.47
CDC42BPA-212ENST00000478573 C2orf27AQ580R0 203 aa5.87□□□□□ -1.47
CDC42BPA-212ENST00000478573 PLEKHG4Q58EX7 1191 aa5.87□□□□□ -1.47
CDC42BPA-212ENST00000478573 DPP8Q6V1X1 898 aaPredicted RBP5.87□□□□□ -1.47
CDC42BPA-212ENST00000478573 NLGN4XQ8N0W4 816 aa5.87□□□□□ -1.47
CDC42BPA-212ENST00000478573 THAP3Q8WTV1 239 aaPredicted RBP5.87□□□□□ -1.47
CDC42BPA-212ENST00000478573 IPO9Q96P70 1041 aaKnown RBP5.87□□□□□ -1.47
CDC42BPA-212ENST00000478573 KATNBL1Q9H079 304 aa5.87□□□□□ -1.47
CDC42BPA-212ENST00000478573 TMEM260Q9NX78 707 aa5.87□□□□□ -1.47
CDC42BPA-212ENST00000478573 SRPK3Q9UPE1 567 aa5.87□□□□□ -1.47
CDC42BPA-212ENST00000478573 PCDHA8Q9Y5H6 950 aa5.87□□□□□ -1.47
CDC42BPA-212ENST00000478573 SCRIBQ14160 1630 aa5.87□□□□□ -1.47
CDC42BPA-212ENST00000478573 PRAMEF25A6NGN4 478 aa5.86□□□□□ -1.47
CDC42BPA-212ENST00000478573 FAM90A27PA6NNH2 459 aa5.86□□□□□ -1.47
CDC42BPA-212ENST00000478573 AQP7O14520 342 aa5.86□□□□□ -1.47
CDC42BPA-212ENST00000478573 KCNK3O14649 394 aa5.86□□□□□ -1.47
CDC42BPA-212ENST00000478573 PYGMP11217 842 aa5.86□□□□□ -1.47
CDC42BPA-212ENST00000478573 POLD1P28340 1107 aa5.86□□□□□ -1.47
CDC42BPA-212ENST00000478573 ACVRL1P37023 503 aa5.86□□□□□ -1.47
CDC42BPA-212ENST00000478573 ADCY8P40145 1251 aa5.86□□□□□ -1.47
CDC42BPA-212ENST00000478573 ST5P78524 1137 aa5.86□□□□□ -1.47
CDC42BPA-212ENST00000478573 GUCY1A3Q02108 690 aa5.86□□□□□ -1.47
CDC42BPA-212ENST00000478573 NOLC1Q14978 699 aaKnown RBP eCLIP5.86□□□□□ -1.47
CDC42BPA-212ENST00000478573 PRKD1Q15139 912 aaPredicted RBP5.86□□□□□ -1.47
CDC42BPA-212ENST00000478573 GPR19Q15760 415 aa5.86□□□□□ -1.47
CDC42BPA-212ENST00000478573 LONRF2Q1L5Z9 754 aa5.86□□□□□ -1.47
CDC42BPA-212ENST00000478573 PTRH1Q86Y79 214 aaKnown RBP5.86□□□□□ -1.47
CDC42BPA-212ENST00000478573 PDGFDQ9GZP0 370 aaPredicted RBP5.86□□□□□ -1.47
CDC42BPA-212ENST00000478573 C12orf65Q9H3J6 166 aaKnown RBP5.86□□□□□ -1.47
CDC42BPA-212ENST00000478573 TESMINQ9Y4I5 508 aa5.86□□□□□ -1.47
CDC42BPA-212ENST00000478573 ATP23Q9Y6H3 246 aa5.86□□□□□ -1.47
CDC42BPA-212ENST00000478573 KDM2BQ8NHM5 1336 aa5.85□□□□□ -1.47
CDC42BPA-212ENST00000478573 TRBV23-1A0A0A0MS06 115 aa5.85□□□□□ -1.47
CDC42BPA-212ENST00000478573 DIAPH1O60610 1272 aaKnown RBP5.85□□□□□ -1.47
CDC42BPA-212ENST00000478573 CDC14BO60729 498 aa5.85□□□□□ -1.47
CDC42BPA-212ENST00000478573 PDE6AP16499 860 aa5.85□□□□□ -1.47
CDC42BPA-212ENST00000478573 SSRP1Q08945 709 aaKnown RBP5.85□□□□□ -1.47
CDC42BPA-212ENST00000478573 TOP3AQ13472 1001 aaPredicted RBP5.85□□□□□ -1.47
CDC42BPA-212ENST00000478573 SQSTM1Q13501 440 aa5.85□□□□□ -1.47
CDC42BPA-212ENST00000478573 RNF151Q2KHN1 245 aa5.85□□□□□ -1.47
CDC42BPA-212ENST00000478573 NRN1LQ496H8 165 aa5.85□□□□□ -1.47
CDC42BPA-212ENST00000478573 FAM209AQ5JX71 171 aa5.85□□□□□ -1.47
CDC42BPA-212ENST00000478573 MAMDC2Q7Z304 686 aaPredicted RBP5.85□□□□□ -1.47
CDC42BPA-212ENST00000478573 OSTM1Q86WC4 334 aa5.85□□□□□ -1.47
CDC42BPA-212ENST00000478573 SCUBE1Q8IWY4 988 aa5.85□□□□□ -1.47
CDC42BPA-212ENST00000478573 FUKQ8N0W3 1084 aa5.85□□□□□ -1.47
CDC42BPA-212ENST00000478573 FBXW5Q969U6 566 aa5.85□□□□□ -1.47
CDC42BPA-212ENST00000478573 PUS7Q96PZ0 661 aaKnown RBP5.85□□□□□ -1.47
CDC42BPA-212ENST00000478573 DPYSL5Q9BPU6 564 aa5.85□□□□□ -1.47
CDC42BPA-212ENST00000478573 KANSL2Q9H9L4 492 aa5.85□□□□□ -1.47
CDC42BPA-212ENST00000478573 MAN2B1O00754 1011 aa5.84□□□□□ -1.47
CDC42BPA-212ENST00000478573 ADCY3O60266 1144 aa5.84□□□□□ -1.47
CDC42BPA-212ENST00000478573 CUTAO60888 179 aa5.84□□□□□ -1.47
CDC42BPA-212ENST00000478573 COMTP21964 271 aa5.84□□□□□ -1.47
CDC42BPA-212ENST00000478573 KCNQ1P51787 676 aa5.84□□□□□ -1.47
CDC42BPA-212ENST00000478573 SUMO1P63165 101 aaKnown RBP5.84□□□□□ -1.47
CDC42BPA-212ENST00000478573 ZMAT1Q5H9K5 638 aa5.84□□□□□ -1.47
CDC42BPA-212ENST00000478573 ZC3H12BQ5HYM0 836 aaKnown RBP5.84□□□□□ -1.47
CDC42BPA-212ENST00000478573 HOMER1Q86YM7 354 aa5.84□□□□□ -1.47
CDC42BPA-212ENST00000478573 APPBP2Q92624 585 aa5.84□□□□□ -1.47
CDC42BPA-212ENST00000478573 PTPRN2Q92932 1015 aa5.84□□□□□ -1.47
CDC42BPA-212ENST00000478573 OR14A2Q96R54 314 aa5.84□□□□□ -1.47
CDC42BPA-212ENST00000478573 KIAA1683Q9H0B3 1180 aa5.84□□□□□ -1.47
CDC42BPA-212ENST00000478573 OAZ3Q9UMX2 235 aa5.84□□□□□ -1.47
CDC42BPA-212ENST00000478573 NR2E1Q9Y466 385 aa5.84□□□□□ -1.47
CDC42BPA-212ENST00000478573 SBNO2Q9Y2G9 1366 aa5.83□□□□□ -1.48
CDC42BPA-212ENST00000478573 NPIPB8E9PQR5 432 aa5.83□□□□□ -1.48
CDC42BPA-212ENST00000478573 CDC45O75419 566 aa5.83□□□□□ -1.48
CDC42BPA-212ENST00000478573 CLSTN1O94985 981 aa5.83□□□□□ -1.48
CDC42BPA-212ENST00000478573 HMGCRP04035 888 aa5.83□□□□□ -1.48
CDC42BPA-212ENST00000478573 AMY2AP04746 511 aa5.83□□□□□ -1.48
CDC42BPA-212ENST00000478573 NCLP19338 710 aaKnown RBP5.83□□□□□ -1.48
CDC42BPA-212ENST00000478573 AMY2BP19961 511 aa5.83□□□□□ -1.48
CDC42BPA-212ENST00000478573 CR2P20023 1033 aa5.83□□□□□ -1.48
CDC42BPA-212ENST00000478573 PTGS1P23219 599 aa5.83□□□□□ -1.48
CDC42BPA-212ENST00000478573 MC4RP32245 332 aa5.83□□□□□ -1.48
CDC42BPA-212ENST00000478573 DNM2P50570 870 aa5.83□□□□□ -1.48
CDC42BPA-212ENST00000478573 JAM2P57087 298 aa5.83□□□□□ -1.48
CDC42BPA-212ENST00000478573 IL13RA1P78552 427 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms