RNA–Protein interactions for RNA: ENST00000478095.1

HDAC6-222, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 620 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-222ENST00000478095 LMBR1Q8WVP7 490 aa11.58□□□□□ -0.56
HDAC6-222ENST00000478095 DHX38Q92620 1227 aaKnown RBP11.58□□□□□ -0.56
HDAC6-222ENST00000478095 ATP6V0A1Q93050 837 aa11.58□□□□□ -0.56
HDAC6-222ENST00000478095 WNT8BQ93098 351 aa11.58□□□□□ -0.56
HDAC6-222ENST00000478095 FAM20AQ96MK3 541 aa11.58□□□□□ -0.56
HDAC6-222ENST00000478095 NOC4LQ9BVI4 516 aaKnown RBP11.58□□□□□ -0.56
HDAC6-222ENST00000478095 MFRPQ9BY79 579 aa11.58□□□□□ -0.56
HDAC6-222ENST00000478095 TBX3O15119 743 aa11.57□□□□□ -0.56
HDAC6-222ENST00000478095 BAG4O95429 457 aaKnown RBP11.57□□□□□ -0.56
HDAC6-222ENST00000478095 TIMP1P01033 207 aa11.57□□□□□ -0.56
HDAC6-222ENST00000478095 ATP4AP20648 1035 aa11.57□□□□□ -0.56
HDAC6-222ENST00000478095 PDCP20941 246 aa11.57□□□□□ -0.56
HDAC6-222ENST00000478095 SYT1P21579 422 aa11.57□□□□□ -0.56
HDAC6-222ENST00000478095 HOXC8P31273 242 aa11.57□□□□□ -0.56
HDAC6-222ENST00000478095 SFNP31947 248 aa11.57□□□□□ -0.56
HDAC6-222ENST00000478095 TXKP42681 527 aa11.57□□□□□ -0.56
HDAC6-222ENST00000478095 TOB1P50616 345 aaPredicted RBP11.57□□□□□ -0.56
HDAC6-222ENST00000478095 B3GNT9Q6UX72 402 aa11.57□□□□□ -0.56
HDAC6-222ENST00000478095 SLFN12Q8IYM2 578 aa11.57□□□□□ -0.56
HDAC6-222ENST00000478095 AFAP1L1Q8TED9 768 aa11.57□□□□□ -0.56
HDAC6-222ENST00000478095 TRAPPC12Q8WVT3 735 aa11.57□□□□□ -0.56
HDAC6-222ENST00000478095 SCLYQ96I15 445 aa11.57□□□□□ -0.56
HDAC6-222ENST00000478095 GDF15Q99988 308 aa11.57□□□□□ -0.56
HDAC6-222ENST00000478095 WNT8AQ9H1J5 351 aa11.57□□□□□ -0.56
HDAC6-222ENST00000478095 RTN4Q9NQC3 1192 aaKnown RBP11.57□□□□□ -0.56
HDAC6-222ENST00000478095 PCDHB6Q9Y5E3 794 aa11.57□□□□□ -0.56
HDAC6-222ENST00000478095 MAFBQ9Y5Q3 323 aaPredicted RBP11.57□□□□□ -0.56
HDAC6-222ENST00000478095 SCN10AQ9Y5Y9 1956 aa11.57□□□□□ -0.56
HDAC6-222ENST00000478095 NRCAMQ92823 1304 aa11.57□□□□□ -0.56
HDAC6-222ENST00000478095 IGSF9BQ9UPX0 1349 aa11.57□□□□□ -0.56
HDAC6-222ENST00000478095 PDE4DIPQ5VU43 2346 aa11.57□□□□□ -0.56
HDAC6-222ENST00000478095 MYH7BA7E2Y1 1941 aa11.56□□□□□ -0.56
HDAC6-222ENST00000478095 POTEB3A0JP26 581 aa11.56□□□□□ -0.56
HDAC6-222ENST00000478095 ZNF862O60290 1169 aa11.56□□□□□ -0.56
HDAC6-222ENST00000478095 OR52Z1P0C646 297 aa11.56□□□□□ -0.56
HDAC6-222ENST00000478095 INSRRP14616 1297 aa11.56□□□□□ -0.56
HDAC6-222ENST00000478095 CSF2RAP15509 400 aa11.56□□□□□ -0.56
HDAC6-222ENST00000478095 TRAPPC10P48553 1259 aa11.56□□□□□ -0.56
HDAC6-222ENST00000478095 EPHB4P54760 987 aa11.56□□□□□ -0.56
HDAC6-222ENST00000478095 PRKCEQ02156 737 aa11.56□□□□□ -0.56
HDAC6-222ENST00000478095 SPIRE1Q08AE8 756 aa11.56□□□□□ -0.56
HDAC6-222ENST00000478095 PTK7Q13308 1070 aa11.56□□□□□ -0.56
HDAC6-222ENST00000478095 PPP2R5CQ13362 524 aa11.56□□□□□ -0.56
HDAC6-222ENST00000478095 MFSD5Q6N075 450 aa11.56□□□□□ -0.56
HDAC6-222ENST00000478095 POTEBQ6S5H4 581 aa11.56□□□□□ -0.56
HDAC6-222ENST00000478095 RUFY4Q6ZNE9 571 aa11.56□□□□□ -0.56
HDAC6-222ENST00000478095 SERINC5Q86VE9 423 aa11.56□□□□□ -0.56
HDAC6-222ENST00000478095 BANK1Q8NDB2 785 aa11.56□□□□□ -0.56
HDAC6-222ENST00000478095 FBXO22Q8NEZ5 403 aa11.56□□□□□ -0.56
HDAC6-222ENST00000478095 ATP8B4Q8TF62 1192 aa11.56□□□□□ -0.56
HDAC6-222ENST00000478095 MTMR9Q96QG7 549 aa11.56□□□□□ -0.56
HDAC6-222ENST00000478095 UBE2OQ9C0C9 1292 aaKnown RBP11.56□□□□□ -0.56
HDAC6-222ENST00000478095 TTC12Q9H892 705 aaPredicted RBP11.56□□□□□ -0.56
HDAC6-222ENST00000478095 POTEMA6NI47 508 aa11.55□□□□□ -0.56
HDAC6-222ENST00000478095 OATP04181 439 aa11.55□□□□□ -0.56
HDAC6-222ENST00000478095 CTSHP09668 335 aa11.55□□□□□ -0.56
HDAC6-222ENST00000478095 ACRP10323 421 aa11.55□□□□□ -0.56
HDAC6-222ENST00000478095 GNAT1P11488 350 aa11.55□□□□□ -0.56
HDAC6-222ENST00000478095 THPOP40225 353 aa11.55□□□□□ -0.56
HDAC6-222ENST00000478095 SLC26A2P50443 739 aa11.55□□□□□ -0.56
HDAC6-222ENST00000478095 ADAM17P78536 824 aa11.55□□□□□ -0.56
HDAC6-222ENST00000478095 CYP4A11Q02928 519 aa11.55□□□□□ -0.56
HDAC6-222ENST00000478095 FPGSQ05932 587 aa11.55□□□□□ -0.56
HDAC6-222ENST00000478095 BFSP2Q13515 415 aa11.55□□□□□ -0.56
HDAC6-222ENST00000478095 TRIM71Q2Q1W2 868 aaKnown RBP11.55□□□□□ -0.56
HDAC6-222ENST00000478095 MARCH8Q5T0T0 291 aa11.55□□□□□ -0.56
HDAC6-222ENST00000478095 TMEM199Q8N511 208 aa11.55□□□□□ -0.56
HDAC6-222ENST00000478095 RETREG2Q8NC44 543 aa11.55□□□□□ -0.56
HDAC6-222ENST00000478095 RDM1Q8NG50 284 aa11.55□□□□□ -0.56
HDAC6-222ENST00000478095 TUBE1Q9UJT0 475 aa11.55□□□□□ -0.56
HDAC6-222ENST00000478095 PCDHA12Q9UN75 941 aa11.55□□□□□ -0.56
HDAC6-222ENST00000478095 MTMR6Q9Y217 621 aa11.55□□□□□ -0.56
HDAC6-222ENST00000478095 DOCK5Q9H7D0 1870 aa11.55□□□□□ -0.56
HDAC6-222ENST00000478095 TMEM150BA6NC51 233 aa11.54□□□□□ -0.56
HDAC6-222ENST00000478095 STX6O43752 255 aa11.54□□□□□ -0.56
HDAC6-222ENST00000478095 HBP1O60381 514 aa11.54□□□□□ -0.56
HDAC6-222ENST00000478095 CKBP12277 381 aa11.54□□□□□ -0.56
HDAC6-222ENST00000478095 TECP42680 631 aa11.54□□□□□ -0.56
HDAC6-222ENST00000478095 PTGDRQ13258 359 aa11.54□□□□□ -0.56
HDAC6-222ENST00000478095 ORC2Q13416 577 aaPredicted RBP11.54□□□□□ -0.56
HDAC6-222ENST00000478095 CTTNQ14247 550 aaKnown RBP11.54□□□□□ -0.56
HDAC6-222ENST00000478095 RILPL1Q5EBL4 403 aa11.54□□□□□ -0.56
HDAC6-222ENST00000478095 FOXD4L5Q5VV16 416 aaPredicted RBP11.54□□□□□ -0.56
HDAC6-222ENST00000478095 FAM173BQ6P4H8 233 aa11.54□□□□□ -0.56
HDAC6-222ENST00000478095 LRRC8DQ7L1W4 858 aa11.54□□□□□ -0.56
HDAC6-222ENST00000478095 CCDC155Q8N6L0 562 aa11.54□□□□□ -0.56
HDAC6-222ENST00000478095 C4orf32Q8N8J7 132 aa11.54□□□□□ -0.56
HDAC6-222ENST00000478095 CAGE1Q8TC20 777 aa11.54□□□□□ -0.56
HDAC6-222ENST00000478095 FOXD4L4Q8WXT5 416 aaPredicted RBP11.54□□□□□ -0.56
HDAC6-222ENST00000478095 DYDC2Q96IM9 177 aa11.54□□□□□ -0.56
HDAC6-222ENST00000478095 SH2D3AQ9BRG2 576 aa11.54□□□□□ -0.56
HDAC6-222ENST00000478095 FAM49AQ9H0Q0 323 aaPredicted RBP11.54□□□□□ -0.56
HDAC6-222ENST00000478095 PRO3102Q9H379 93 aa11.54□□□□□ -0.56
HDAC6-222ENST00000478095 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.54□□□□□ -0.56
HDAC6-222ENST00000478095 RGL1Q9NZL6 768 aa11.54□□□□□ -0.56
HDAC6-222ENST00000478095 WRAP73Q9P2S5 460 aaPredicted RBP11.54□□□□□ -0.56
HDAC6-222ENST00000478095 SEPT9Q9UHD8 586 aaPredicted RBP11.54□□□□□ -0.56
HDAC6-222ENST00000478095 MBLAC1A4D2B0 266 aaPredicted RBP11.53□□□□□ -0.56
HDAC6-222ENST00000478095 RRN3P2A6NIE6 340 aa11.53□□□□□ -0.56
HDAC6-222ENST00000478095 ZBTB42B2RXF5 422 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms