RNA–Protein interactions for RNA: ENST00000477547.6

SEC13-215, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 1,313 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-215ENST00000477547 KRT79Q5XKE5 535 aa17.18■□□□□ 0.34
SEC13-215ENST00000477547 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.18■□□□□ 0.34
SEC13-215ENST00000477547 CKAP2LQ8IYA6 745 aa17.18■□□□□ 0.34
SEC13-215ENST00000477547 KAT2BQ92831 832 aa17.18■□□□□ 0.34
SEC13-215ENST00000477547 GLT1D1Q96MS3 346 aa17.18■□□□□ 0.34
SEC13-215ENST00000477547 RGL1Q9NZL6 768 aa17.18■□□□□ 0.34
SEC13-215ENST00000477547 KDM3AQ9Y4C1 1321 aa17.18■□□□□ 0.34
SEC13-215ENST00000477547 STK24Q9Y6E0 443 aa17.18■□□□□ 0.34
SEC13-215ENST00000477547 MYH11P35749 1972 aa17.17■□□□□ 0.34
SEC13-215ENST00000477547 POTEB3A0JP26 581 aa17.17■□□□□ 0.34
SEC13-215ENST00000477547 H3BRB1 525 aa17.17■□□□□ 0.34
SEC13-215ENST00000477547 P4HBP07237 508 aaKnown RBP17.17■□□□□ 0.34
SEC13-215ENST00000477547 CDC25AP30304 524 aa17.17■□□□□ 0.34
SEC13-215ENST00000477547 TXLNAP40222 546 aa17.17■□□□□ 0.34
SEC13-215ENST00000477547 QARSP47897 775 aaKnown RBP17.17■□□□□ 0.34
SEC13-215ENST00000477547 PSEN2P49810 448 aa17.17■□□□□ 0.34
SEC13-215ENST00000477547 SLC26A2P50443 739 aa17.17■□□□□ 0.34
SEC13-215ENST00000477547 PSMC5P62195 406 aa17.17■□□□□ 0.34
SEC13-215ENST00000477547 PSMC6P62333 389 aa17.17■□□□□ 0.34
SEC13-215ENST00000477547 CTTNQ14247 550 aaKnown RBP17.17■□□□□ 0.34
SEC13-215ENST00000477547 SPECC1Q5M775 1068 aa17.17■□□□□ 0.34
SEC13-215ENST00000477547 POTEBQ6S5H4 581 aa17.17■□□□□ 0.34
SEC13-215ENST00000477547 PLPPR4Q7Z2D5 763 aa17.17■□□□□ 0.34
SEC13-215ENST00000477547 RASSF8Q8NHQ8 419 aa17.17■□□□□ 0.34
SEC13-215ENST00000477547 UBE2OQ9C0C9 1292 aaKnown RBP17.17■□□□□ 0.34
SEC13-215ENST00000477547 TUT1Q9H6E5 874 aaKnown RBP17.17■□□□□ 0.34
SEC13-215ENST00000477547 TUFT1Q9NNX1 390 aa17.17■□□□□ 0.34
SEC13-215ENST00000477547 STARD7Q9NQZ5 370 aa17.17■□□□□ 0.34
SEC13-215ENST00000477547 PCDHA7Q9UN72 937 aa17.17■□□□□ 0.34
SEC13-215ENST00000477547 ZNF862O60290 1169 aa17.16■□□□□ 0.34
SEC13-215ENST00000477547 DKC1O60832 514 aaKnown RBP eCLIP17.16■□□□□ 0.34
SEC13-215ENST00000477547 MED24O75448 989 aa17.16■□□□□ 0.34
SEC13-215ENST00000477547 OATP04181 439 aa17.16■□□□□ 0.34
SEC13-215ENST00000477547 UBA7P41226 1012 aa17.16■□□□□ 0.34
SEC13-215ENST00000477547 ZRSR1Q15695 479 aaKnown RBP17.16■□□□□ 0.34
SEC13-215ENST00000477547 CSPP1Q1MSJ5 1256 aa17.16■□□□□ 0.34
SEC13-215ENST00000477547 KIAA0753Q2KHM9 967 aa17.16■□□□□ 0.34
SEC13-215ENST00000477547 AXDND1Q5T1B0 1012 aaPredicted RBP17.16■□□□□ 0.34
SEC13-215ENST00000477547 POTEGQ6S5H5 508 aa17.16■□□□□ 0.34
SEC13-215ENST00000477547 CABP7Q86V35 215 aa17.16■□□□□ 0.34
SEC13-215ENST00000477547 TPH2Q8IWU9 490 aa17.16■□□□□ 0.34
SEC13-215ENST00000477547 SYMPKQ92797 1274 aaKnown RBP17.16■□□□□ 0.34
SEC13-215ENST00000477547 CDK5RAP3Q96JB5 506 aa17.16■□□□□ 0.34
SEC13-215ENST00000477547 FAM167AQ96KS9 214 aa17.16■□□□□ 0.34
SEC13-215ENST00000477547 GBP4Q96PP9 640 aa17.16■□□□□ 0.34
SEC13-215ENST00000477547 MMTAG2Q9BU76 263 aaKnown RBP17.16■□□□□ 0.34
SEC13-215ENST00000477547 POLR3CQ9BUI4 534 aaPredicted RBP17.16■□□□□ 0.34
SEC13-215ENST00000477547 WRAP73Q9P2S5 460 aaPredicted RBP17.16■□□□□ 0.34
SEC13-215ENST00000477547 TRPC6Q9Y210 931 aa17.16■□□□□ 0.34
SEC13-215ENST00000477547 MAFBQ9Y5Q3 323 aaPredicted RBP17.16■□□□□ 0.34
SEC13-215ENST00000477547 TANC1Q9C0D5 1861 aa17.15■□□□□ 0.34
SEC13-215ENST00000477547 HAS3O00219 553 aa17.15■□□□□ 0.34
SEC13-215ENST00000477547 RPA1P27694 616 aa17.15■□□□□ 0.34
SEC13-215ENST00000477547 PLCB4Q15147 1175 aa17.15■□□□□ 0.34
SEC13-215ENST00000477547 TRMT1LQ7Z2T5 733 aaKnown RBP17.15■□□□□ 0.34
SEC13-215ENST00000477547 CATSPER3Q86XQ3 398 aa17.15■□□□□ 0.34
SEC13-215ENST00000477547 ZNF579Q8NAF0 562 aaKnown RBP17.15■□□□□ 0.34
SEC13-215ENST00000477547 ATP8B4Q8TF62 1192 aa17.15■□□□□ 0.34
SEC13-215ENST00000477547 PPP1R13LQ8WUF5 828 aa17.15■□□□□ 0.34
SEC13-215ENST00000477547 VTI1AQ96AJ9 217 aa17.15■□□□□ 0.34
SEC13-215ENST00000477547 HSD17B14Q9BPX1 270 aa17.15■□□□□ 0.34
SEC13-215ENST00000477547 C11orf49Q9H6J7 331 aa17.15■□□□□ 0.34
SEC13-215ENST00000477547 ZSWIM4Q9H7M6 989 aa17.15■□□□□ 0.34
SEC13-215ENST00000477547 SEPT9Q9UHD8 586 aaPredicted RBP17.15■□□□□ 0.34
SEC13-215ENST00000477547 A0A0U1RQG5 324 aaPredicted RBP17.14■□□□□ 0.33
SEC13-215ENST00000477547 SPATA31C1P0DKV0 1188 aa17.14■□□□□ 0.33
SEC13-215ENST00000477547 COL6A1P12109 1028 aa17.14■□□□□ 0.33
SEC13-215ENST00000477547 TPRNQ4KMQ1 711 aa17.14■□□□□ 0.33
SEC13-215ENST00000477547 FAM47CQ5HY64 1035 aa17.14■□□□□ 0.33
SEC13-215ENST00000477547 SHC4Q6S5L8 630 aa17.14■□□□□ 0.33
SEC13-215ENST00000477547 USP49Q70CQ1 688 aa17.14■□□□□ 0.33
SEC13-215ENST00000477547 C4orf19Q8IY42 314 aa17.14■□□□□ 0.33
SEC13-215ENST00000477547 CALML4Q96GE6 196 aa17.14■□□□□ 0.33
SEC13-215ENST00000477547 EPSTI1Q96J88 318 aa17.14■□□□□ 0.33
SEC13-215ENST00000477547 CCDC43Q96MW1 224 aaKnown RBP17.14■□□□□ 0.33
SEC13-215ENST00000477547 SENP6Q9GZR1 1112 aaPredicted RBP17.14■□□□□ 0.33
SEC13-215ENST00000477547 LAMA2P24043 3122 aaKnown RBP17.13■□□□□ 0.33
SEC13-215ENST00000477547 VCANP13611 3396 aa17.13■□□□□ 0.33
SEC13-215ENST00000477547 SLC26A4O43511 780 aa17.13■□□□□ 0.33
SEC13-215ENST00000477547 SLITRK3O94933 977 aa17.13■□□□□ 0.33
SEC13-215ENST00000477547 SMIM10L2AP0DMW4 78 aa17.13■□□□□ 0.33
SEC13-215ENST00000477547 SMIM10L2BP0DMW5 78 aa17.13■□□□□ 0.33
SEC13-215ENST00000477547 ATP4AP20648 1035 aa17.13■□□□□ 0.33
SEC13-215ENST00000477547 PPFIA1Q13136 1202 aa17.13■□□□□ 0.33
SEC13-215ENST00000477547 GRB10Q13322 594 aa17.13■□□□□ 0.33
SEC13-215ENST00000477547 ITGA7Q13683 1181 aa17.13■□□□□ 0.33
SEC13-215ENST00000477547 KARSQ15046 597 aaKnown RBP17.13■□□□□ 0.33
SEC13-215ENST00000477547 NBPF20Q3BBV1 942 aa17.13■□□□□ 0.33
SEC13-215ENST00000477547 XKR3Q5GH77 459 aa17.13■□□□□ 0.33
SEC13-215ENST00000477547 C7orf31Q8N865 590 aa17.13■□□□□ 0.33
SEC13-215ENST00000477547 TMEM87AQ8NBN3 555 aa17.13■□□□□ 0.33
SEC13-215ENST00000477547 BBXQ8WY36 941 aaPredicted RBP17.13■□□□□ 0.33
SEC13-215ENST00000477547 GUCD1Q96NT3 240 aa17.13■□□□□ 0.33
SEC13-215ENST00000477547 CCSER1Q9C0I3 900 aa17.13■□□□□ 0.33
SEC13-215ENST00000477547 RNPEPQ9H4A4 650 aa17.13■□□□□ 0.33
SEC13-215ENST00000477547 DDX19AQ9NUU7 478 aaKnown RBP17.13■□□□□ 0.33
SEC13-215ENST00000477547 COL1A2P08123 1366 aa17.12■□□□□ 0.33
SEC13-215ENST00000477547 SIP14410 1827 aa17.12■□□□□ 0.33
SEC13-215ENST00000477547 EYSQ5T1H1 3165 aa17.12■□□□□ 0.33
SEC13-215ENST00000477547 TMEM150BA6NC51 233 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 1164.2 ms