RNA–Protein interactions for RNA: ENST00000477429.1

COL4A5-204, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL4A5, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-204ENST00000477429 DNAJB3Q8WWF6 145 aa11.31□□□□□ -0.6
COL4A5-204ENST00000477429 APBB2Q92870 758 aa11.31□□□□□ -0.6
COL4A5-204ENST00000477429 PCYT2Q99447 389 aa11.31□□□□□ -0.6
COL4A5-204ENST00000477429 USP26Q9BXU7 913 aa11.31□□□□□ -0.6
COL4A5-204ENST00000477429 CDY2AQ9Y6F7 541 aa11.31□□□□□ -0.6
COL4A5-204ENST00000477429 NOP56O00567 594 aaKnown RBP11.3□□□□□ -0.6
COL4A5-204ENST00000477429 NCK2O43639 380 aa11.3□□□□□ -0.6
COL4A5-204ENST00000477429 COASYQ13057 564 aa11.3□□□□□ -0.6
COL4A5-204ENST00000477429 GRM4Q14833 912 aa11.3□□□□□ -0.6
COL4A5-204ENST00000477429 IFIT1BQ5T764 474 aaKnown RBP11.3□□□□□ -0.6
COL4A5-204ENST00000477429 DIEXFQ68CQ4 756 aaKnown RBP11.3□□□□□ -0.6
COL4A5-204ENST00000477429 PLEKHM2Q8IWE5 1019 aa11.3□□□□□ -0.6
COL4A5-204ENST00000477429 EFHBQ8N7U6 833 aa11.3□□□□□ -0.6
COL4A5-204ENST00000477429 FEZF2Q8TBJ5 459 aa11.3□□□□□ -0.6
COL4A5-204ENST00000477429 TRAPPC12Q8WVT3 735 aa11.3□□□□□ -0.6
COL4A5-204ENST00000477429 POF1BQ8WVV4 589 aa11.3□□□□□ -0.6
COL4A5-204ENST00000477429 POP1Q99575 1024 aaKnown RBP11.3□□□□□ -0.6
COL4A5-204ENST00000477429 TMX1Q9H3N1 280 aa11.3□□□□□ -0.6
COL4A5-204ENST00000477429 SMOC2Q9H3U7 446 aa11.3□□□□□ -0.6
COL4A5-204ENST00000477429 PLXNA4Q9HCM2 1894 aa11.29□□□□□ -0.6
COL4A5-204ENST00000477429 MBLAC1A4D2B0 266 aaPredicted RBP11.29□□□□□ -0.6
COL4A5-204ENST00000477429 MGEA5O60502 916 aa11.29□□□□□ -0.6
COL4A5-204ENST00000477429 PPFIA3O75145 1194 aa11.29□□□□□ -0.6
COL4A5-204ENST00000477429 KCNA2P16389 499 aa11.29□□□□□ -0.6
COL4A5-204ENST00000477429 TCF7P36402 384 aaPredicted RBP11.29□□□□□ -0.6
COL4A5-204ENST00000477429 ERVFC1P60507 584 aa11.29□□□□□ -0.6
COL4A5-204ENST00000477429 TMEM62Q0P6H9 643 aa11.29□□□□□ -0.6
COL4A5-204ENST00000477429 GRIK4Q16099 956 aa11.29□□□□□ -0.6
COL4A5-204ENST00000477429 FBXL6Q8N531 539 aa11.29□□□□□ -0.6
COL4A5-204ENST00000477429 ATP8B4Q8TF62 1192 aa11.29□□□□□ -0.6
COL4A5-204ENST00000477429 RPGRIP1Q96KN7 1286 aa11.29□□□□□ -0.6
COL4A5-204ENST00000477429 MAP3K20Q9NYL2 800 aaKnown RBP11.29□□□□□ -0.6
COL4A5-204ENST00000477429 PKD2L1Q9P0L9 805 aa11.29□□□□□ -0.6
COL4A5-204ENST00000477429 NRCAMQ92823 1304 aa11.29□□□□□ -0.6
COL4A5-204ENST00000477429 MEIS2O14770 477 aa11.28□□□□□ -0.6
COL4A5-204ENST00000477429 ZZEF1O43149 2961 aa11.28□□□□□ -0.6
COL4A5-204ENST00000477429 FIBPO43427 364 aa11.28□□□□□ -0.6
COL4A5-204ENST00000477429 ITGB5P18084 799 aa11.28□□□□□ -0.6
COL4A5-204ENST00000477429 SP100P23497 879 aaPredicted RBP11.28□□□□□ -0.6
COL4A5-204ENST00000477429 NUBP1P53384 320 aa11.28□□□□□ -0.6
COL4A5-204ENST00000477429 IGBP1P78318 339 aa11.28□□□□□ -0.6
COL4A5-204ENST00000477429 PPFIA1Q13136 1202 aa11.28□□□□□ -0.6
COL4A5-204ENST00000477429 NEDD9Q14511 834 aa11.28□□□□□ -0.6
COL4A5-204ENST00000477429 TMEM266Q2M3C6 531 aa11.28□□□□□ -0.6
COL4A5-204ENST00000477429 CCDC178Q5BJE1 867 aa11.28□□□□□ -0.6
COL4A5-204ENST00000477429 TSHZ1Q6ZSZ6 1077 aa11.28□□□□□ -0.6
COL4A5-204ENST00000477429 SUSD6Q92537 303 aa11.28□□□□□ -0.6
COL4A5-204ENST00000477429 P2RX5Q93086 422 aa11.28□□□□□ -0.6
COL4A5-204ENST00000477429 APOL5Q9BWW9 433 aa11.28□□□□□ -0.6
COL4A5-204ENST00000477429 PLVAPQ9BX97 442 aa11.28□□□□□ -0.6
COL4A5-204ENST00000477429 FAM49AQ9H0Q0 323 aaPredicted RBP11.28□□□□□ -0.6
COL4A5-204ENST00000477429 S1PR5Q9H228 398 aa11.28□□□□□ -0.6
COL4A5-204ENST00000477429 CDHR5Q9HBB8 845 aa11.28□□□□□ -0.6
COL4A5-204ENST00000477429 SPEGQ15772 3267 aa11.28□□□□□ -0.6
COL4A5-204ENST00000477429 PNMA6FA0A0J9YX94 578 aa11.27□□□□□ -0.61
COL4A5-204ENST00000477429 GNAT1P11488 350 aa11.27□□□□□ -0.61
COL4A5-204ENST00000477429 IBSPP21815 317 aaPredicted RBP11.27□□□□□ -0.61
COL4A5-204ENST00000477429 AVPR2P30518 371 aa11.27□□□□□ -0.61
COL4A5-204ENST00000477429 NBL1P41271 181 aa11.27□□□□□ -0.61
COL4A5-204ENST00000477429 ANTXR2P58335 489 aa11.27□□□□□ -0.61
COL4A5-204ENST00000477429 MRPS6P82932 125 aaKnown RBP11.27□□□□□ -0.61
COL4A5-204ENST00000477429 APOBRQ0VD83 1088 aa11.27□□□□□ -0.61
COL4A5-204ENST00000477429 TROAPQ12815 778 aa11.27□□□□□ -0.61
COL4A5-204ENST00000477429 HDAC1Q13547 482 aaPredicted RBP11.27□□□□□ -0.61
COL4A5-204ENST00000477429 KCNC3Q14003 757 aa11.27□□□□□ -0.61
COL4A5-204ENST00000477429 GSE1Q14687 1217 aa11.27□□□□□ -0.61
COL4A5-204ENST00000477429 B4GALNT3Q6L9W6 998 aa11.27□□□□□ -0.61
COL4A5-204ENST00000477429 CMTR2Q8IYT2 770 aaKnown RBP11.27□□□□□ -0.61
COL4A5-204ENST00000477429 UBAC1Q9BSL1 405 aa11.27□□□□□ -0.61
COL4A5-204ENST00000477429 MYL10Q9BUA6 226 aa11.27□□□□□ -0.61
COL4A5-204ENST00000477429 DSCC1Q9BVC3 393 aa11.27□□□□□ -0.61
COL4A5-204ENST00000477429 SH2B1Q9NRF2 756 aaPredicted RBP11.27□□□□□ -0.61
COL4A5-204ENST00000477429 TUBE1Q9UJT0 475 aa11.27□□□□□ -0.61
COL4A5-204ENST00000477429 PADI3Q9ULW8 664 aa11.27□□□□□ -0.61
COL4A5-204ENST00000477429 RWDD3Q9Y3V2 267 aa11.27□□□□□ -0.61
COL4A5-204ENST00000477429 BPTFQ12830 3046 aa11.26□□□□□ -0.61
COL4A5-204ENST00000477429 IGHDP01880 384 aa11.26□□□□□ -0.61
COL4A5-204ENST00000477429 INSRRP14616 1297 aa11.26□□□□□ -0.61
COL4A5-204ENST00000477429 PTH1RQ03431 593 aa11.26□□□□□ -0.61
COL4A5-204ENST00000477429 SIGLEC14Q08ET2 396 aa11.26□□□□□ -0.61
COL4A5-204ENST00000477429 GNPTABQ3T906 1256 aa11.26□□□□□ -0.61
COL4A5-204ENST00000477429 FAM102BQ5T8I3 360 aa11.26□□□□□ -0.61
COL4A5-204ENST00000477429 PCNX4Q63HM2 1172 aa11.26□□□□□ -0.61
COL4A5-204ENST00000477429 SYCE2Q6PIF2 218 aa11.26□□□□□ -0.61
COL4A5-204ENST00000477429 NPAS4Q8IUM7 802 aa11.26□□□□□ -0.61
COL4A5-204ENST00000477429 SAMD3Q8N6K7 520 aa11.26□□□□□ -0.61
COL4A5-204ENST00000477429 TMEM40Q8WWA1 233 aa11.26□□□□□ -0.61
COL4A5-204ENST00000477429 SENP7Q9BQF6 1050 aa11.26□□□□□ -0.61
COL4A5-204ENST00000477429 PHF7Q9BWX1 381 aaPredicted RBP11.26□□□□□ -0.61
COL4A5-204ENST00000477429 KRT23Q9C075 422 aa11.26□□□□□ -0.61
COL4A5-204ENST00000477429 ZNF215Q9UL58 517 aaPredicted RBP11.26□□□□□ -0.61
COL4A5-204ENST00000477429 hCG_1642624A0A1W2PR95 340 aa11.25□□□□□ -0.61
COL4A5-204ENST00000477429 FSCN2O14926 492 aa11.25□□□□□ -0.61
COL4A5-204ENST00000477429 CYP21A2P08686 494 aa11.25□□□□□ -0.61
COL4A5-204ENST00000477429 UBE2SQ16763 222 aa11.25□□□□□ -0.61
COL4A5-204ENST00000477429 PTPN21Q16825 1174 aa11.25□□□□□ -0.61
COL4A5-204ENST00000477429 IMMTQ16891 758 aaKnown RBP11.25□□□□□ -0.61
COL4A5-204ENST00000477429 TAF2Q6P1X5 1199 aa11.25□□□□□ -0.61
COL4A5-204ENST00000477429 TICAM2Q86XR7 235 aa11.25□□□□□ -0.61
COL4A5-204ENST00000477429 SUGP1Q8IWZ8 645 aaKnown RBP11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms