RNA–Protein interactions for RNA: ENST00000477335.5

PGK1-204, Transcript of phosphoglycerate kinase 1, humanhuman

TSL 3

Gene PGK1, Length 353 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGK1-204ENST00000477335 QARSP47897 775 aaKnown RBP10.39□□□□□ -0.75
PGK1-204ENST00000477335 CTCFP49711 727 aaPredicted RBP10.39□□□□□ -0.75
PGK1-204ENST00000477335 SLC12A3P55017 1021 aa10.39□□□□□ -0.75
PGK1-204ENST00000477335 BEX3Q00994 111 aa10.39□□□□□ -0.75
PGK1-204ENST00000477335 HAUS3Q68CZ6 603 aa10.39□□□□□ -0.75
PGK1-204ENST00000477335 PLA2G4FQ68DD2 849 aa10.39□□□□□ -0.75
PGK1-204ENST00000477335 ERMNQ8TAM6 284 aa10.39□□□□□ -0.75
PGK1-204ENST00000477335 NEK9Q8TD19 979 aa10.39□□□□□ -0.75
PGK1-204ENST00000477335 PPP1R13LQ8WUF5 828 aa10.39□□□□□ -0.75
PGK1-204ENST00000477335 SEPT1Q8WYJ6 367 aa10.39□□□□□ -0.75
PGK1-204ENST00000477335 CALML4Q96GE6 196 aa10.39□□□□□ -0.75
PGK1-204ENST00000477335 PAGE5Q96GU1 130 aa10.39□□□□□ -0.75
PGK1-204ENST00000477335 SH2D3AQ9BRG2 576 aa10.39□□□□□ -0.75
PGK1-204ENST00000477335 C16orf70Q9BSU1 422 aa10.39□□□□□ -0.75
PGK1-204ENST00000477335 UPF3AQ9H1J1 476 aaKnown RBP10.39□□□□□ -0.75
PGK1-204ENST00000477335 MAFBQ9Y5Q3 323 aaPredicted RBP10.39□□□□□ -0.75
PGK1-204ENST00000477335 EMSYQ7Z589 1322 aa10.38□□□□□ -0.75
PGK1-204ENST00000477335 NPHP3-ACAD11A0A0J9YXS1 232 aa10.38□□□□□ -0.75
PGK1-204ENST00000477335 MYMKA6NI61 221 aa10.38□□□□□ -0.75
PGK1-204ENST00000477335 A6NJR5 290 aa10.38□□□□□ -0.75
PGK1-204ENST00000477335 BACH1O14867 736 aa10.38□□□□□ -0.75
PGK1-204ENST00000477335 KINO60870 393 aaKnown RBP10.38□□□□□ -0.75
PGK1-204ENST00000477335 ADAMTS4O75173 837 aa10.38□□□□□ -0.75
PGK1-204ENST00000477335 DUSP11O75319 330 aaKnown RBP10.38□□□□□ -0.75
PGK1-204ENST00000477335 PGK1P00558 417 aa10.38□□□□□ -0.75
PGK1-204ENST00000477335 LGALS2P05162 132 aa10.38□□□□□ -0.75
PGK1-204ENST00000477335 PLA2G4BP0C869 781 aa10.38□□□□□ -0.75
PGK1-204ENST00000477335 MARK3P27448 753 aa10.38□□□□□ -0.75
PGK1-204ENST00000477335 CNGA1P29973 690 aa10.38□□□□□ -0.75
PGK1-204ENST00000477335 AFMP43652 599 aa10.38□□□□□ -0.75
PGK1-204ENST00000477335 NPEPPSP55786 919 aa10.38□□□□□ -0.75
PGK1-204ENST00000477335 GJA9P57773 515 aa10.38□□□□□ -0.75
PGK1-204ENST00000477335 PSMC5P62195 406 aa10.38□□□□□ -0.75
PGK1-204ENST00000477335 NKX3-2P78367 333 aa10.38□□□□□ -0.75
PGK1-204ENST00000477335 PRKCEQ02156 737 aa10.38□□□□□ -0.75
PGK1-204ENST00000477335 PNOCQ13519 176 aa10.38□□□□□ -0.75
PGK1-204ENST00000477335 CUL4BQ13620 913 aa10.38□□□□□ -0.75
PGK1-204ENST00000477335 DHX8Q14562 1220 aaKnown RBP10.38□□□□□ -0.75
PGK1-204ENST00000477335 ARHGEF6Q15052 776 aa10.38□□□□□ -0.75
PGK1-204ENST00000477335 MTFR1Q15390 333 aa10.38□□□□□ -0.75
PGK1-204ENST00000477335 ARSHQ5FYA8 562 aa10.38□□□□□ -0.75
PGK1-204ENST00000477335 LHX8Q68G74 356 aa10.38□□□□□ -0.75
PGK1-204ENST00000477335 ANO5Q75V66 913 aa10.38□□□□□ -0.75
PGK1-204ENST00000477335 CTU1Q7Z7A3 348 aaKnown RBP10.38□□□□□ -0.75
PGK1-204ENST00000477335 C4orf19Q8IY42 314 aa10.38□□□□□ -0.75
PGK1-204ENST00000477335 IQUBQ8NA54 791 aa10.38□□□□□ -0.75
PGK1-204ENST00000477335 CNNM3Q8NE01 707 aa10.38□□□□□ -0.75
PGK1-204ENST00000477335 RASSF8Q8NHQ8 419 aa10.38□□□□□ -0.75
PGK1-204ENST00000477335 AFAP1L1Q8TED9 768 aa10.38□□□□□ -0.75
PGK1-204ENST00000477335 KAT2BQ92831 832 aa10.38□□□□□ -0.75
PGK1-204ENST00000477335 RNF25Q96BH1 459 aaPredicted RBP10.38□□□□□ -0.75
PGK1-204ENST00000477335 TIGD1Q96MW7 591 aa10.38□□□□□ -0.75
PGK1-204ENST00000477335 CEP89Q96ST8 783 aa10.38□□□□□ -0.75
PGK1-204ENST00000477335 RUSC1Q9BVN2 902 aa10.38□□□□□ -0.75
PGK1-204ENST00000477335 UNC93B1Q9H1C4 597 aa10.38□□□□□ -0.75
PGK1-204ENST00000477335 NUP62CLQ9H1M0 184 aa10.38□□□□□ -0.75
PGK1-204ENST00000477335 BLZF1Q9H2G9 400 aa10.38□□□□□ -0.75
PGK1-204ENST00000477335 ZSWIM4Q9H7M6 989 aa10.38□□□□□ -0.75
PGK1-204ENST00000477335 ZNF302Q9NR11 478 aa10.38□□□□□ -0.75
PGK1-204ENST00000477335 KBTBD4Q9NVX7 518 aa10.38□□□□□ -0.75
PGK1-204ENST00000477335 STK17AQ9UEE5 414 aa10.38□□□□□ -0.75
PGK1-204ENST00000477335 CCDC39Q9UFE4 941 aa10.38□□□□□ -0.75
PGK1-204ENST00000477335 DDX20Q9UHI6 824 aaKnown RBP10.38□□□□□ -0.75
PGK1-204ENST00000477335 WDR81Q562E7 1941 aa10.37□□□□□ -0.75
PGK1-204ENST00000477335 ZBTB42B2RXF5 422 aa10.37□□□□□ -0.75
PGK1-204ENST00000477335 RBAK-RBAKDNI3L0D1 243 aa10.37□□□□□ -0.75
PGK1-204ENST00000477335 NOP56O00567 594 aaKnown RBP10.37□□□□□ -0.75
PGK1-204ENST00000477335 EYA4O95677 639 aa10.37□□□□□ -0.75
PGK1-204ENST00000477335 MYCP01106 439 aaPredicted RBP10.37□□□□□ -0.75
PGK1-204ENST00000477335 CYP11B2P19099 503 aa10.37□□□□□ -0.75
PGK1-204ENST00000477335 MUTP22033 750 aa10.37□□□□□ -0.75
PGK1-204ENST00000477335 YWHABP31946 246 aaKnown RBP10.37□□□□□ -0.75
PGK1-204ENST00000477335 CENPFP49454 3210 aa10.37□□□□□ -0.75
PGK1-204ENST00000477335 STAT5BP51692 787 aa10.37□□□□□ -0.75
PGK1-204ENST00000477335 DPYDQ12882 1025 aa10.37□□□□□ -0.75
PGK1-204ENST00000477335 PLCB4Q15147 1175 aa10.37□□□□□ -0.75
PGK1-204ENST00000477335 SKOR2Q2VWA4 1001 aaPredicted RBP10.37□□□□□ -0.75
PGK1-204ENST00000477335 CCDC183Q5T5S1 534 aa10.37□□□□□ -0.75
PGK1-204ENST00000477335 CCSAPQ6IQ19 270 aaPredicted RBP10.37□□□□□ -0.75
PGK1-204ENST00000477335 RBM43Q6ZSC3 357 aaKnown RBP10.37□□□□□ -0.75
PGK1-204ENST00000477335 TRMT1LQ7Z2T5 733 aaKnown RBP10.37□□□□□ -0.75
PGK1-204ENST00000477335 CKAP2LQ8IYA6 745 aa10.37□□□□□ -0.75
PGK1-204ENST00000477335 SYT2Q8N9I0 419 aaPredicted RBP10.37□□□□□ -0.75
PGK1-204ENST00000477335 KLHDC9Q8NEP7 349 aa10.37□□□□□ -0.75
PGK1-204ENST00000477335 LARP4BQ92615 738 aaKnown RBP10.37□□□□□ -0.75
PGK1-204ENST00000477335 ZBTB10Q96DT7 871 aa10.37□□□□□ -0.75
PGK1-204ENST00000477335 CDK5RAP3Q96JB5 506 aa10.37□□□□□ -0.75
PGK1-204ENST00000477335 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.37□□□□□ -0.75
PGK1-204ENST00000477335 NT5C3AQ9H0P0 336 aa10.37□□□□□ -0.75
PGK1-204ENST00000477335 GZF1Q9H116 711 aaPredicted RBP10.37□□□□□ -0.75
PGK1-204ENST00000477335 BHMT2Q9H2M3 363 aa10.37□□□□□ -0.75
PGK1-204ENST00000477335 RNPEPQ9H4A4 650 aa10.37□□□□□ -0.75
PGK1-204ENST00000477335 POLD4Q9HCU8 107 aa10.37□□□□□ -0.75
PGK1-204ENST00000477335 USP25Q9UHP3 1055 aa10.37□□□□□ -0.75
PGK1-204ENST00000477335 TCEAL9Q9UHQ7 104 aa10.37□□□□□ -0.75
PGK1-204ENST00000477335 PCDHB8Q9UN66 801 aa10.37□□□□□ -0.75
PGK1-204ENST00000477335 Q9Y3F1 56 aa10.37□□□□□ -0.75
PGK1-204ENST00000477335 PCDHB13Q9Y5F0 798 aa10.37□□□□□ -0.75
PGK1-204ENST00000477335 STK24Q9Y6E0 443 aa10.37□□□□□ -0.75
PGK1-204ENST00000477335 FRMPD3Q5JV73 1810 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms