RNA–Protein interactions for RNA: ENST00000477182.5

LSM2-212, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM2, Length 767 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-212ENST00000477182 MMP1P03956 469 aa13.14□□□□□ -0.31
LSM2-212ENST00000477182 CALML3P27482 149 aa13.14□□□□□ -0.31
LSM2-212ENST00000477182 NBL1P41271 181 aa13.14□□□□□ -0.31
LSM2-212ENST00000477182 ADCY7P51828 1080 aa13.14□□□□□ -0.31
LSM2-212ENST00000477182 MKRN4PQ13434 485 aaPredicted RBP13.14□□□□□ -0.31
LSM2-212ENST00000477182 PKP1Q13835 747 aa13.14□□□□□ -0.31
LSM2-212ENST00000477182 CBX2Q14781 532 aaPredicted RBP13.14□□□□□ -0.31
LSM2-212ENST00000477182 NPY5RQ15761 445 aa13.14□□□□□ -0.31
LSM2-212ENST00000477182 ZNF618Q5T7W0 954 aa13.14□□□□□ -0.31
LSM2-212ENST00000477182 FOXD4L5Q5VV16 416 aaPredicted RBP13.14□□□□□ -0.31
LSM2-212ENST00000477182 FAM177A1Q8N128 213 aaPredicted RBP13.14□□□□□ -0.31
LSM2-212ENST00000477182 DBF4BQ8NFT6 615 aa13.14□□□□□ -0.31
LSM2-212ENST00000477182 CLEC4DQ8WXI8 215 aa13.14□□□□□ -0.31
LSM2-212ENST00000477182 FOXD4L4Q8WXT5 416 aaPredicted RBP13.14□□□□□ -0.31
LSM2-212ENST00000477182 COPS5Q92905 334 aa13.14□□□□□ -0.31
LSM2-212ENST00000477182 TOP1MTQ969P6 601 aa13.14□□□□□ -0.31
LSM2-212ENST00000477182 PPP2R3CQ969Q6 453 aa13.14□□□□□ -0.31
LSM2-212ENST00000477182 KATNAL1Q9BW62 490 aa13.14□□□□□ -0.31
LSM2-212ENST00000477182 ZMYND12Q9H0C1 365 aa13.14□□□□□ -0.31
LSM2-212ENST00000477182 PSTPIP2Q9H939 334 aa13.14□□□□□ -0.31
LSM2-212ENST00000477182 C6orf50Q9HD87 102 aa13.14□□□□□ -0.31
LSM2-212ENST00000477182 MTMR6Q9Y217 621 aa13.14□□□□□ -0.31
LSM2-212ENST00000477182 TCHHQ07283 1943 aa13.13□□□□□ -0.31
LSM2-212ENST00000477182 ATG2AQ2TAZ0 1938 aa13.13□□□□□ -0.31
LSM2-212ENST00000477182 CACNA1BQ00975 2339 aa13.13□□□□□ -0.31
LSM2-212ENST00000477182 C5orf67F2Z3F1 127 aa13.13□□□□□ -0.31
LSM2-212ENST00000477182 GALR2O43603 387 aaPredicted RBP13.13□□□□□ -0.31
LSM2-212ENST00000477182 TBX10O75333 385 aa13.13□□□□□ -0.31
LSM2-212ENST00000477182 MMP3P08254 477 aa13.13□□□□□ -0.31
LSM2-212ENST00000477182 KRT2P35908 639 aa13.13□□□□□ -0.31
LSM2-212ENST00000477182 NDUFV1P49821 464 aa13.13□□□□□ -0.31
LSM2-212ENST00000477182 SAFBQ15424 915 aaKnown RBP eCLIP13.13□□□□□ -0.31
LSM2-212ENST00000477182 UBE2SQ16763 222 aa13.13□□□□□ -0.31
LSM2-212ENST00000477182 MCTP1Q6DN14 999 aa13.13□□□□□ -0.31
LSM2-212ENST00000477182 TRAF7Q6Q0C0 670 aa13.13□□□□□ -0.31
LSM2-212ENST00000477182 DIS3L2Q8IYB7 885 aaKnown RBP13.13□□□□□ -0.31
LSM2-212ENST00000477182 BLIDQ8IZY5 108 aa13.13□□□□□ -0.31
LSM2-212ENST00000477182 DNERQ8NFT8 737 aa13.13□□□□□ -0.31
LSM2-212ENST00000477182 OXER1Q8TDS5 423 aa13.13□□□□□ -0.31
LSM2-212ENST00000477182 TBC1D5Q92609 795 aa13.13□□□□□ -0.31
LSM2-212ENST00000477182 CUL5Q93034 780 aa13.13□□□□□ -0.31
LSM2-212ENST00000477182 ASIC4Q96FT7 647 aa13.13□□□□□ -0.31
LSM2-212ENST00000477182 RIC8AQ9NPQ8 531 aa13.13□□□□□ -0.31
LSM2-212ENST00000477182 HDAC6Q9UBN7 1215 aa13.13□□□□□ -0.31
LSM2-212ENST00000477182 PCDHA4Q9UN74 947 aa13.13□□□□□ -0.31
LSM2-212ENST00000477182 BTBD18B2RXH4 712 aa13.12□□□□□ -0.31
LSM2-212ENST00000477182 CFBP00751 764 aa13.12□□□□□ -0.31
LSM2-212ENST00000477182 EDNRBP24530 442 aa13.12□□□□□ -0.31
LSM2-212ENST00000477182 GNA11P29992 359 aa13.12□□□□□ -0.31
LSM2-212ENST00000477182 HOXA13P31271 388 aaPredicted RBP13.12□□□□□ -0.31
LSM2-212ENST00000477182 CTNNB1P35222 781 aa13.12□□□□□ -0.31
LSM2-212ENST00000477182 NR5A1Q13285 461 aa13.12□□□□□ -0.31
LSM2-212ENST00000477182 ADAM15Q13444 863 aa13.12□□□□□ -0.31
LSM2-212ENST00000477182 MBTPS1Q14703 1052 aa13.12□□□□□ -0.31
LSM2-212ENST00000477182 DGKDQ16760 1214 aa13.12□□□□□ -0.31
LSM2-212ENST00000477182 TRIM71Q2Q1W2 868 aaKnown RBP13.12□□□□□ -0.31
LSM2-212ENST00000477182 PLEKHG4Q58EX7 1191 aa13.12□□□□□ -0.31
LSM2-212ENST00000477182 GALNT17Q6IS24 598 aa13.12□□□□□ -0.31
LSM2-212ENST00000477182 FERMT3Q86UX7 667 aa13.12□□□□□ -0.31
LSM2-212ENST00000477182 FIBCD1Q8N539 461 aa13.12□□□□□ -0.31
LSM2-212ENST00000477182 DAGLBQ8NCG7 672 aa13.12□□□□□ -0.31
LSM2-212ENST00000477182 RGS22Q8NE09 1264 aa13.12□□□□□ -0.31
LSM2-212ENST00000477182 RASGRP4Q8TDF6 673 aa13.12□□□□□ -0.31
LSM2-212ENST00000477182 AFG1LQ8WV93 481 aa13.12□□□□□ -0.31
LSM2-212ENST00000477182 KAT2BQ92831 832 aa13.12□□□□□ -0.31
LSM2-212ENST00000477182 MSLNLQ96KJ4 702 aa13.12□□□□□ -0.31
LSM2-212ENST00000477182 IGFLR1Q9H665 355 aa13.12□□□□□ -0.31
LSM2-212ENST00000477182 BRMS1Q9HCU9 246 aa13.12□□□□□ -0.31
LSM2-212ENST00000477182 CIZ1Q9ULV3 898 aaPredicted RBP13.12□□□□□ -0.31
LSM2-212ENST00000477182 RSPH10B2B2RC85 870 aa13.11□□□□□ -0.31
LSM2-212ENST00000477182 GCOM1H8Y6P7 765 aaPredicted RBP13.11□□□□□ -0.31
LSM2-212ENST00000477182 UPP2O95045 317 aa13.11□□□□□ -0.31
LSM2-212ENST00000477182 GH1P01241 217 aa13.11□□□□□ -0.31
LSM2-212ENST00000477182 RSPH10BP0C881 870 aa13.11□□□□□ -0.31
LSM2-212ENST00000477182 POLR2MP0CAP2 368 aa13.11□□□□□ -0.31
LSM2-212ENST00000477182 ZSCAN22P10073 491 aaPredicted RBP13.11□□□□□ -0.31
LSM2-212ENST00000477182 GNL2Q13823 731 aaKnown RBP13.11□□□□□ -0.31
LSM2-212ENST00000477182 JAKMIP3Q5VZ66 844 aa13.11□□□□□ -0.31
LSM2-212ENST00000477182 MCTP2Q6DN12 878 aa13.11□□□□□ -0.31
LSM2-212ENST00000477182 USP17L6PQ6QN14 398 aa13.11□□□□□ -0.31
LSM2-212ENST00000477182 RNF207Q6ZRF8 634 aa13.11□□□□□ -0.31
LSM2-212ENST00000477182 MCF2L2Q86YR7 1114 aa13.11□□□□□ -0.31
LSM2-212ENST00000477182 REXO1Q8N1G1 1221 aaKnown RBP13.11□□□□□ -0.31
LSM2-212ENST00000477182 SMRP1Q8NCR6 262 aa13.11□□□□□ -0.31
LSM2-212ENST00000477182 BICD2Q8TD16 824 aa13.11□□□□□ -0.31
LSM2-212ENST00000477182 SEPT8Q92599 483 aa13.11□□□□□ -0.31
LSM2-212ENST00000477182 NKD2Q969F2 451 aaPredicted RBP13.11□□□□□ -0.31
LSM2-212ENST00000477182 PHF7Q9BWX1 381 aaPredicted RBP13.11□□□□□ -0.31
LSM2-212ENST00000477182 IFIH1Q9BYX4 1025 aaKnown RBP13.11□□□□□ -0.31
LSM2-212ENST00000477182 GLT8D2Q9H1C3 349 aa13.11□□□□□ -0.31
LSM2-212ENST00000477182 TMEM260Q9NX78 707 aa13.11□□□□□ -0.31
LSM2-212ENST00000477182 CHMP5Q9NZZ3 219 aa13.11□□□□□ -0.31
LSM2-212ENST00000477182 ZDHHC9Q9Y397 364 aa13.11□□□□□ -0.31
LSM2-212ENST00000477182 DMDP11532 3685 aa13.1□□□□□ -0.31
LSM2-212ENST00000477182 M0R2N6 131 aa13.1□□□□□ -0.31
LSM2-212ENST00000477182 PIK3CDO00329 1044 aa13.1□□□□□ -0.31
LSM2-212ENST00000477182 MEIS2O14770 477 aa13.1□□□□□ -0.31
LSM2-212ENST00000477182 GRM6O15303 877 aa13.1□□□□□ -0.31
LSM2-212ENST00000477182 BRD1O95696 1058 aa13.1□□□□□ -0.31
LSM2-212ENST00000477182 PDIA4P13667 645 aaKnown RBP13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms