RNA–Protein interactions for RNA: ENST00000476777.5

BRCA1-213, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 769 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-213ENST00000476777 GIMAP8Q8ND71 665 aaPredicted RBP13.1□□□□□ -0.31
BRCA1-213ENST00000476777 SEPT1Q8WYJ6 367 aa13.1□□□□□ -0.31
BRCA1-213ENST00000476777 LNPKQ9C0E8 428 aa13.1□□□□□ -0.31
BRCA1-213ENST00000476777 SENP2Q9HC62 589 aa13.1□□□□□ -0.31
BRCA1-213ENST00000476777 DIAPH3Q9NSV4 1193 aa13.1□□□□□ -0.31
BRCA1-213ENST00000476777 PADI3Q9ULW8 664 aa13.1□□□□□ -0.31
BRCA1-213ENST00000476777 CEP250Q9BV73 2442 aa13.1□□□□□ -0.31
BRCA1-213ENST00000476777 FRYLO94915 3013 aa13.1□□□□□ -0.31
BRCA1-213ENST00000476777 CACNA1BQ00975 2339 aa13.1□□□□□ -0.31
BRCA1-213ENST00000476777 PROB1E7EW31 1015 aa13.09□□□□□ -0.31
BRCA1-213ENST00000476777 H0Y858 1186 aa13.09□□□□□ -0.31
BRCA1-213ENST00000476777 MEIS2O14770 477 aa13.09□□□□□ -0.31
BRCA1-213ENST00000476777 PDGFBP01127 241 aaPredicted RBP13.09□□□□□ -0.31
BRCA1-213ENST00000476777 RPLP2P05387 115 aaKnown RBP13.09□□□□□ -0.31
BRCA1-213ENST00000476777 NUBP1P53384 320 aa13.09□□□□□ -0.31
BRCA1-213ENST00000476777 IGBP1P78318 339 aa13.09□□□□□ -0.31
BRCA1-213ENST00000476777 UBE3AQ05086 875 aa13.09□□□□□ -0.31
BRCA1-213ENST00000476777 DUSP6Q16828 381 aa13.09□□□□□ -0.31
BRCA1-213ENST00000476777 DIEXFQ68CQ4 756 aaKnown RBP13.09□□□□□ -0.31
BRCA1-213ENST00000476777 NLRX1Q86UT6 975 aa13.09□□□□□ -0.31
BRCA1-213ENST00000476777 MICAL1Q8TDZ2 1067 aa13.09□□□□□ -0.31
BRCA1-213ENST00000476777 GLG1Q92896 1179 aa13.09□□□□□ -0.31
BRCA1-213ENST00000476777 CDCA3Q99618 268 aaPredicted RBP13.09□□□□□ -0.31
BRCA1-213ENST00000476777 FAM49AQ9H0Q0 323 aaPredicted RBP13.09□□□□□ -0.31
BRCA1-213ENST00000476777 S1PR5Q9H228 398 aa13.09□□□□□ -0.31
BRCA1-213ENST00000476777 TMX1Q9H3N1 280 aa13.09□□□□□ -0.31
BRCA1-213ENST00000476777 SMARCAD1Q9H4L7 1026 aa13.09□□□□□ -0.31
BRCA1-213ENST00000476777 TLR9Q9NR96 1032 aa13.09□□□□□ -0.31
BRCA1-213ENST00000476777 IGSF9BQ9UPX0 1349 aa13.09□□□□□ -0.31
BRCA1-213ENST00000476777 PIK3CDO00329 1044 aa13.08□□□□□ -0.32
BRCA1-213ENST00000476777 INSRRP14616 1297 aa13.08□□□□□ -0.32
BRCA1-213ENST00000476777 ITGB5P18084 799 aa13.08□□□□□ -0.32
BRCA1-213ENST00000476777 TMEM62Q0P6H9 643 aa13.08□□□□□ -0.32
BRCA1-213ENST00000476777 TROAPQ12815 778 aa13.08□□□□□ -0.32
BRCA1-213ENST00000476777 PAK2Q13177 524 aa13.08□□□□□ -0.32
BRCA1-213ENST00000476777 KCNC3Q14003 757 aa13.08□□□□□ -0.32
BRCA1-213ENST00000476777 TMEM184AQ6ZMB5 413 aa13.08□□□□□ -0.32
BRCA1-213ENST00000476777 SMARCC2Q8TAQ2 1214 aa13.08□□□□□ -0.32
BRCA1-213ENST00000476777 PIBF1Q8WXW3 757 aa13.08□□□□□ -0.32
BRCA1-213ENST00000476777 GPRASP2Q96D09 838 aa13.08□□□□□ -0.32
BRCA1-213ENST00000476777 RIPOR3Q96MK2 946 aa13.08□□□□□ -0.32
BRCA1-213ENST00000476777 NEK1Q96PY6 1258 aa13.08□□□□□ -0.32
BRCA1-213ENST00000476777 PCYT2Q99447 389 aa13.08□□□□□ -0.32
BRCA1-213ENST00000476777 PCDHB12Q9Y5F1 795 aa13.08□□□□□ -0.32
BRCA1-213ENST00000476777 TRPV2Q9Y5S1 764 aa13.08□□□□□ -0.32
BRCA1-213ENST00000476777 FNDC1Q4ZHG4 1894 aaPredicted RBP13.08□□□□□ -0.32
BRCA1-213ENST00000476777 FSD2A1L4K1 749 aa13.07□□□□□ -0.32
BRCA1-213ENST00000476777 RRN3P2A6NIE6 340 aa13.07□□□□□ -0.32
BRCA1-213ENST00000476777 FSCN2O14926 492 aa13.07□□□□□ -0.32
BRCA1-213ENST00000476777 GALR2O43603 387 aaPredicted RBP13.07□□□□□ -0.32
BRCA1-213ENST00000476777 SARSP49591 514 aaKnown RBP13.07□□□□□ -0.32
BRCA1-213ENST00000476777 ERVFC1P60507 584 aa13.07□□□□□ -0.32
BRCA1-213ENST00000476777 SYCE2Q6PIF2 218 aa13.07□□□□□ -0.32
BRCA1-213ENST00000476777 ASCL5Q7RTU5 278 aa13.07□□□□□ -0.32
BRCA1-213ENST00000476777 PLEKHM2Q8IWE5 1019 aa13.07□□□□□ -0.32
BRCA1-213ENST00000476777 CUL5Q93034 780 aa13.07□□□□□ -0.32
BRCA1-213ENST00000476777 CDHR1Q96JP9 859 aa13.07□□□□□ -0.32
BRCA1-213ENST00000476777 CELF4Q9BZC1 486 aaKnown RBP13.07□□□□□ -0.32
BRCA1-213ENST00000476777 IL25Q9H293 177 aa13.07□□□□□ -0.32
BRCA1-213ENST00000476777 OSBPL3Q9H4L5 887 aa13.07□□□□□ -0.32
BRCA1-213ENST00000476777 LRFN2Q9ULH4 789 aa13.07□□□□□ -0.32
BRCA1-213ENST00000476777 PCDHA2Q9Y5H9 948 aa13.07□□□□□ -0.32
BRCA1-213ENST00000476777 KDM3AQ9Y4C1 1321 aa13.07□□□□□ -0.32
BRCA1-213ENST00000476777 SPTBN2O15020 2390 aa13.07□□□□□ -0.32
BRCA1-213ENST00000476777 M0QZ92 97 aa13.06□□□□□ -0.32
BRCA1-213ENST00000476777 HIP1O00291 1037 aa13.06□□□□□ -0.32
BRCA1-213ENST00000476777 IFIT3O14879 490 aaKnown RBP13.06□□□□□ -0.32
BRCA1-213ENST00000476777 FGF18O76093 207 aa13.06□□□□□ -0.32
BRCA1-213ENST00000476777 TMEM266Q2M3C6 531 aa13.06□□□□□ -0.32
BRCA1-213ENST00000476777 PDE12Q6L8Q7 609 aaKnown RBP13.06□□□□□ -0.32
BRCA1-213ENST00000476777 ANKRD54Q6NXT1 300 aa13.06□□□□□ -0.32
BRCA1-213ENST00000476777 ZBTB33Q86T24 672 aa13.06□□□□□ -0.32
BRCA1-213ENST00000476777 AAASQ9NRG9 546 aa13.06□□□□□ -0.32
BRCA1-213ENST00000476777 PKD2L1Q9P0L9 805 aa13.06□□□□□ -0.32
BRCA1-213ENST00000476777 HCSTQ9UBK5 93 aa13.06□□□□□ -0.32
BRCA1-213ENST00000476777 PCDHB7Q9Y5E2 793 aa13.06□□□□□ -0.32
BRCA1-213ENST00000476777 PRR23AA6NEV1 266 aa13.05□□□□□ -0.32
BRCA1-213ENST00000476777 TBKBP1A7MCY6 615 aa13.05□□□□□ -0.32
BRCA1-213ENST00000476777 MGEA5O60502 916 aa13.05□□□□□ -0.32
BRCA1-213ENST00000476777 IBSPP21815 317 aaPredicted RBP13.05□□□□□ -0.32
BRCA1-213ENST00000476777 SP100P23497 879 aaPredicted RBP13.05□□□□□ -0.32
BRCA1-213ENST00000476777 NBL1P41271 181 aa13.05□□□□□ -0.32
BRCA1-213ENST00000476777 TECP42680 631 aa13.05□□□□□ -0.32
BRCA1-213ENST00000476777 KRT76Q01546 638 aa13.05□□□□□ -0.32
BRCA1-213ENST00000476777 TRDNQ13061 729 aa13.05□□□□□ -0.32
BRCA1-213ENST00000476777 MTMR1Q13613 665 aa13.05□□□□□ -0.32
BRCA1-213ENST00000476777 SPOUT1Q5T280 376 aaKnown RBP13.05□□□□□ -0.32
BRCA1-213ENST00000476777 FAM102BQ5T8I3 360 aa13.05□□□□□ -0.32
BRCA1-213ENST00000476777 THNSL1Q8IYQ7 743 aa13.05□□□□□ -0.32
BRCA1-213ENST00000476777 COLGALT1Q8NBJ5 622 aa13.05□□□□□ -0.32
BRCA1-213ENST00000476777 KREMEN2Q8NCW0 462 aa13.05□□□□□ -0.32
BRCA1-213ENST00000476777 RASGRP4Q8TDF6 673 aa13.05□□□□□ -0.32
BRCA1-213ENST00000476777 TRAPPC12Q8WVT3 735 aa13.05□□□□□ -0.32
BRCA1-213ENST00000476777 APOL5Q9BWW9 433 aa13.05□□□□□ -0.32
BRCA1-213ENST00000476777 TYW1Q9NV66 732 aaKnown RBP13.05□□□□□ -0.32
BRCA1-213ENST00000476777 TMEM260Q9NX78 707 aa13.05□□□□□ -0.32
BRCA1-213ENST00000476777 UBIAD1Q9Y5Z9 338 aa13.05□□□□□ -0.32
BRCA1-213ENST00000476777 SRGAP2BP0DMP2 458 aa13.04□□□□□ -0.32
BRCA1-213ENST00000476777 APOBRQ0VD83 1088 aa13.04□□□□□ -0.32
BRCA1-213ENST00000476777 NFX1Q12986 1120 aaKnown RBP13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms