RNA–Protein interactions for RNA: ENST00000476183.2

LIME1-204, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5

Gene LIME1, Length 809 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-204ENST00000476183 MOXD1Q6UVY6 613 aa23.95■■□□□ 1.42
LIME1-204ENST00000476183 HERC6Q8IVU3 1022 aa23.95■■□□□ 1.42
LIME1-204ENST00000476183 ATP8B4Q8TF62 1192 aa23.95■■□□□ 1.42
LIME1-204ENST00000476183 RIT2Q99578 217 aa23.95■■□□□ 1.42
LIME1-204ENST00000476183 MAFBQ9Y5Q3 323 aaPredicted RBP23.95■■□□□ 1.42
LIME1-204ENST00000476183 MICAL3Q7RTP6 2002 aa23.94■■□□□ 1.42
LIME1-204ENST00000476183 CCDC194A0A1B0GVG4 234 aa23.94■■□□□ 1.42
LIME1-204ENST00000476183 SLC37A4O43826 429 aa23.94■■□□□ 1.42
LIME1-204ENST00000476183 GAS7O60861 476 aa23.94■■□□□ 1.42
LIME1-204ENST00000476183 PSAPP07602 524 aa23.94■■□□□ 1.42
LIME1-204ENST00000476183 IKBKEQ14164 716 aa23.94■■□□□ 1.42
LIME1-204ENST00000476183 LRCH2Q5VUJ6 765 aa23.94■■□□□ 1.42
LIME1-204ENST00000476183 PIK3AP1Q6ZUJ8 805 aa23.94■■□□□ 1.42
LIME1-204ENST00000476183 ETNPPLQ8TBG4 499 aa23.94■■□□□ 1.42
LIME1-204ENST00000476183 TNPO1Q92973 898 aaKnown RBP23.94■■□□□ 1.42
LIME1-204ENST00000476183 FAM49AQ9H0Q0 323 aaPredicted RBP23.94■■□□□ 1.42
LIME1-204ENST00000476183 UNC45AQ9H3U1 944 aa23.94■■□□□ 1.42
LIME1-204ENST00000476183 GABBR1Q9UBS5 961 aa23.94■■□□□ 1.42
LIME1-204ENST00000476183 FAM205CA6NFA0 338 aa23.93■■□□□ 1.42
LIME1-204ENST00000476183 WDR64B1ANS9 1081 aa23.93■■□□□ 1.42
LIME1-204ENST00000476183 ZBTB42B2RXF5 422 aa23.93■■□□□ 1.42
LIME1-204ENST00000476183 HBP1O60381 514 aa23.93■■□□□ 1.42
LIME1-204ENST00000476183 PSMD10O75832 226 aa23.93■■□□□ 1.42
LIME1-204ENST00000476183 FOSBP53539 338 aa23.93■■□□□ 1.42
LIME1-204ENST00000476183 NR5A1Q13285 461 aa23.93■■□□□ 1.42
LIME1-204ENST00000476183 LETM2Q2VYF4 491 aa23.93■■□□□ 1.42
LIME1-204ENST00000476183 MTHFD1LQ6UB35 978 aa23.93■■□□□ 1.42
LIME1-204ENST00000476183 CCDC83Q8IWF9 413 aa23.93■■□□□ 1.42
LIME1-204ENST00000476183 TNFRSF25Q93038 417 aa23.93■■□□□ 1.42
LIME1-204ENST00000476183 SLC28A3Q9HAS3 691 aa23.93■■□□□ 1.42
LIME1-204ENST00000476183 DISC1Q9NRI5 854 aa23.93■■□□□ 1.42
LIME1-204ENST00000476183 DDX25Q9UHL0 483 aaKnown RBP23.93■■□□□ 1.42
LIME1-204ENST00000476183 TCEAL9Q9UHQ7 104 aa23.93■■□□□ 1.42
LIME1-204ENST00000476183 SAMM50Q9Y512 469 aa23.93■■□□□ 1.42
LIME1-204ENST00000476183 PCDHA2Q9Y5H9 948 aa23.93■■□□□ 1.42
LIME1-204ENST00000476183 IGSF9BQ9UPX0 1349 aa23.92■■□□□ 1.42
LIME1-204ENST00000476183 CHMP2AO43633 222 aa23.92■■□□□ 1.42
LIME1-204ENST00000476183 ARHGEF15O94989 841 aa23.92■■□□□ 1.42
LIME1-204ENST00000476183 LIN28BQ6ZN17 250 aaKnown RBP eCLIP23.92■■□□□ 1.42
LIME1-204ENST00000476183 NEK8Q86SG6 692 aa23.92■■□□□ 1.42
LIME1-204ENST00000476183 RSPH3Q86UC2 560 aa23.92■■□□□ 1.42
LIME1-204ENST00000476183 TEKT3Q9BXF9 490 aa23.92■■□□□ 1.42
LIME1-204ENST00000476183 EFCAB14O75071 495 aa23.91■■□□□ 1.42
LIME1-204ENST00000476183 CA3P07451 260 aa23.91■■□□□ 1.42
LIME1-204ENST00000476183 KRT2P35908 639 aa23.91■■□□□ 1.42
LIME1-204ENST00000476183 PPP2R2DQ66LE6 453 aa23.91■■□□□ 1.42
LIME1-204ENST00000476183 B3GNT9Q6UX72 402 aa23.91■■□□□ 1.42
LIME1-204ENST00000476183 SEPT8Q92599 483 aa23.91■■□□□ 1.42
LIME1-204ENST00000476183 PRDM12Q9H4Q4 367 aa23.91■■□□□ 1.42
LIME1-204ENST00000476183 CDY2AQ9Y6F7 541 aa23.91■■□□□ 1.42
LIME1-204ENST00000476183 PRUNE2Q8WUY3 3088 aa23.9■■□□□ 1.42
LIME1-204ENST00000476183 EVPLQ92817 2033 aa23.9■■□□□ 1.42
LIME1-204ENST00000476183 ZNF862O60290 1169 aa23.9■■□□□ 1.42
LIME1-204ENST00000476183 MMP1P03956 469 aa23.9■■□□□ 1.42
LIME1-204ENST00000476183 GHRP10912 638 aa23.9■■□□□ 1.42
LIME1-204ENST00000476183 KLRC1P26715 233 aa23.9■■□□□ 1.42
LIME1-204ENST00000476183 MRPS6P82932 125 aaKnown RBP23.9■■□□□ 1.42
LIME1-204ENST00000476183 TMEM62Q0P6H9 643 aa23.9■■□□□ 1.42
LIME1-204ENST00000476183 LPIN1Q14693 890 aa23.9■■□□□ 1.42
LIME1-204ENST00000476183 UGCGQ16739 394 aa23.9■■□□□ 1.42
LIME1-204ENST00000476183 ZNF484Q5JVG2 852 aa23.9■■□□□ 1.42
LIME1-204ENST00000476183 KRT40Q6A162 431 aa23.9■■□□□ 1.42
LIME1-204ENST00000476183 PPP4R3AQ6IN85 833 aa23.9■■□□□ 1.42
LIME1-204ENST00000476183 TRMT1LQ7Z2T5 733 aaKnown RBP23.9■■□□□ 1.42
LIME1-204ENST00000476183 CKAP2LQ8IYA6 745 aa23.9■■□□□ 1.42
LIME1-204ENST00000476183 BBXQ8WY36 941 aaPredicted RBP23.9■■□□□ 1.42
LIME1-204ENST00000476183 COL1A2P08123 1366 aa23.9■■□□□ 1.42
LIME1-204ENST00000476183 SMIM35A0A1B0GVV1 85 aa23.89■■□□□ 1.41
LIME1-204ENST00000476183 FOSL2P15408 326 aa23.89■■□□□ 1.41
LIME1-204ENST00000476183 FBXO47Q5MNV8 452 aa23.89■■□□□ 1.41
LIME1-204ENST00000476183 IFIH1Q9BYX4 1025 aaKnown RBP23.89■■□□□ 1.41
LIME1-204ENST00000476183 KCNMB3Q9NPA1 279 aa23.89■■□□□ 1.41
LIME1-204ENST00000476183 LOXHD1Q8IVV2 1947 aa23.88■■□□□ 1.41
LIME1-204ENST00000476183 LCHNA4D1U4 455 aa23.88■■□□□ 1.41
LIME1-204ENST00000476183 BTBD18B2RXH4 712 aa23.88■■□□□ 1.41
LIME1-204ENST00000476183 KIF28PB7ZC32 967 aa23.88■■□□□ 1.41
LIME1-204ENST00000476183 TLL1O43897 1013 aa23.88■■□□□ 1.41
LIME1-204ENST00000476183 CCNT1O60563 726 aaKnown RBP23.88■■□□□ 1.41
LIME1-204ENST00000476183 GJB5O95377 273 aa23.88■■□□□ 1.41
LIME1-204ENST00000476183 SFNP31947 248 aa23.88■■□□□ 1.41
LIME1-204ENST00000476183 JAK3P52333 1124 aa23.88■■□□□ 1.41
LIME1-204ENST00000476183 MIER3Q7Z3K6 550 aa23.88■■□□□ 1.41
LIME1-204ENST00000476183 ZSCAN31Q96LW9 406 aaPredicted RBP23.88■■□□□ 1.41
LIME1-204ENST00000476183 BRMS1Q9HCU9 246 aa23.88■■□□□ 1.41
LIME1-204ENST00000476183 TRANK1O15050 2925 aa23.87■■□□□ 1.41
LIME1-204ENST00000476183 LOC101059915A0A1B0GWI6 518 aaPredicted RBP23.87■■□□□ 1.41
LIME1-204ENST00000476183 C22orf31O95567 290 aa23.87■■□□□ 1.41
LIME1-204ENST00000476183 RPLP2P05387 115 aaKnown RBP23.87■■□□□ 1.41
LIME1-204ENST00000476183 GCFC2P16383 781 aaKnown RBP23.87■■□□□ 1.41
LIME1-204ENST00000476183 PRKCEQ02156 737 aa23.87■■□□□ 1.41
LIME1-204ENST00000476183 RABEP1Q15276 862 aa23.87■■□□□ 1.41
LIME1-204ENST00000476183 FAM117BQ6P1L5 589 aa23.87■■□□□ 1.41
LIME1-204ENST00000476183 SPRED2Q7Z698 418 aa23.87■■□□□ 1.41
LIME1-204ENST00000476183 DIS3L2Q8IYB7 885 aaKnown RBP23.87■■□□□ 1.41
LIME1-204ENST00000476183 KIAA0319LQ8IZA0 1049 aa23.87■■□□□ 1.41
LIME1-204ENST00000476183 HAS1Q92839 578 aa23.87■■□□□ 1.41
LIME1-204ENST00000476183 APBB2Q92870 758 aa23.87■■□□□ 1.41
LIME1-204ENST00000476183 LLPHQ9BRT6 129 aaKnown RBP23.87■■□□□ 1.41
LIME1-204ENST00000476183 AGO3Q9H9G7 860 aaKnown RBP23.87■■□□□ 1.41
LIME1-204ENST00000476183 SH2B1Q9NRF2 756 aaPredicted RBP23.87■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms