RNA–Protein interactions for RNA: ENST00000476169.1

VPS13D-207, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 3

Gene VPS13D, Length 475 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-207ENST00000476169 ACSS2Q9NR19 701 aa5.21□□□□□ -1.58
VPS13D-207ENST00000476169 MKS1Q9NXB0 559 aa5.21□□□□□ -1.58
VPS13D-207ENST00000476169 FBLN5Q9UBX5 448 aa5.21□□□□□ -1.58
VPS13D-207ENST00000476169 ANAPC4Q9UJX5 808 aa5.21□□□□□ -1.58
VPS13D-207ENST00000476169 ZNF652Q9Y2D9 606 aa5.21□□□□□ -1.58
VPS13D-207ENST00000476169 NOC2LQ9Y3T9 749 aaKnown RBP5.21□□□□□ -1.58
VPS13D-207ENST00000476169 B3GALT1Q9Y5Z6 326 aa5.21□□□□□ -1.58
VPS13D-207ENST00000476169 MRFAP1Q9Y605 127 aa5.21□□□□□ -1.58
VPS13D-207ENST00000476169 ATP23Q9Y6H3 246 aa5.21□□□□□ -1.58
VPS13D-207ENST00000476169 A0A0U1RQG5 324 aaPredicted RBP5.2□□□□□ -1.58
VPS13D-207ENST00000476169 MSTNO14793 375 aa5.2□□□□□ -1.58
VPS13D-207ENST00000476169 CLASP2O75122 1294 aaKnown RBP5.2□□□□□ -1.58
VPS13D-207ENST00000476169 CFBP00751 764 aa5.2□□□□□ -1.58
VPS13D-207ENST00000476169 SCAND1P57086 179 aa5.2□□□□□ -1.58
VPS13D-207ENST00000476169 CHAF1AQ13111 956 aaPredicted RBP5.2□□□□□ -1.58
VPS13D-207ENST00000476169 CLUL1Q15846 466 aa5.2□□□□□ -1.58
VPS13D-207ENST00000476169 EMC4Q5J8M3 183 aa5.2□□□□□ -1.58
VPS13D-207ENST00000476169 GPR158Q5T848 1215 aa5.2□□□□□ -1.58
VPS13D-207ENST00000476169 BICRALQ6AI39 1079 aa5.2□□□□□ -1.58
VPS13D-207ENST00000476169 ERAP2Q6P179 960 aa5.2□□□□□ -1.58
VPS13D-207ENST00000476169 ZNF574Q6ZN55 896 aaPredicted RBP5.2□□□□□ -1.58
VPS13D-207ENST00000476169 KCTD1Q719H9 257 aa5.2□□□□□ -1.58
VPS13D-207ENST00000476169 SPRED2Q7Z698 418 aa5.2□□□□□ -1.58
VPS13D-207ENST00000476169 RASSF3Q86WH2 238 aa5.2□□□□□ -1.58
VPS13D-207ENST00000476169 SMAP1Q8IYB5 467 aaPredicted RBP5.2□□□□□ -1.58
VPS13D-207ENST00000476169 PDZD8Q8NEN9 1154 aa5.2□□□□□ -1.58
VPS13D-207ENST00000476169 C1orf162Q8NEQ5 155 aaPredicted RBP5.2□□□□□ -1.58
VPS13D-207ENST00000476169 DLG3Q92796 817 aa5.2□□□□□ -1.58
VPS13D-207ENST00000476169 HSPBAP1Q96EW2 488 aa5.2□□□□□ -1.58
VPS13D-207ENST00000476169 CCDC120Q96HB5 630 aa5.2□□□□□ -1.58
VPS13D-207ENST00000476169 SCLT1Q96NL6 688 aa5.2□□□□□ -1.58
VPS13D-207ENST00000476169 PLCD4Q9BRC7 762 aa5.2□□□□□ -1.58
VPS13D-207ENST00000476169 SLC13A1Q9BZW2 595 aa5.2□□□□□ -1.58
VPS13D-207ENST00000476169 MS4A5Q9H3V2 200 aa5.2□□□□□ -1.58
VPS13D-207ENST00000476169 ZHX3Q9H4I2 956 aa5.2□□□□□ -1.58
VPS13D-207ENST00000476169 PLCB1Q9NQ66 1216 aa5.2□□□□□ -1.58
VPS13D-207ENST00000476169 CASS4Q9NQ75 786 aa5.2□□□□□ -1.58
VPS13D-207ENST00000476169 ANLNQ9NQW6 1124 aa5.2□□□□□ -1.58
VPS13D-207ENST00000476169 MAN1C1Q9NR34 630 aa5.2□□□□□ -1.58
VPS13D-207ENST00000476169 KCNH7Q9NS40 1196 aa5.2□□□□□ -1.58
VPS13D-207ENST00000476169 TOPORSQ9NS56 1045 aaPredicted RBP5.2□□□□□ -1.58
VPS13D-207ENST00000476169 DDX20Q9UHI6 824 aaKnown RBP5.2□□□□□ -1.58
VPS13D-207ENST00000476169 ACSL6Q9UKU0 697 aa5.2□□□□□ -1.58
VPS13D-207ENST00000476169 LZTS1Q9Y250 596 aa5.2□□□□□ -1.58
VPS13D-207ENST00000476169 ANO9A1A5B4 782 aa5.19□□□□□ -1.58
VPS13D-207ENST00000476169 FITM1A5D6W6 292 aa5.19□□□□□ -1.58
VPS13D-207ENST00000476169 GOLGA8AA7E2F4 631 aa5.19□□□□□ -1.58
VPS13D-207ENST00000476169 GOLGA8BA8MQT2 603 aa5.19□□□□□ -1.58
VPS13D-207ENST00000476169 HGSO14964 777 aaPredicted RBP5.19□□□□□ -1.58
VPS13D-207ENST00000476169 SLC27A2O14975 620 aa5.19□□□□□ -1.58
VPS13D-207ENST00000476169 PMM2O15305 246 aa5.19□□□□□ -1.58
VPS13D-207ENST00000476169 COBLO75128 1261 aa5.19□□□□□ -1.58
VPS13D-207ENST00000476169 LTFP02788 710 aa5.19□□□□□ -1.58
VPS13D-207ENST00000476169 CYP17A1P05093 508 aa5.19□□□□□ -1.58
VPS13D-207ENST00000476169 PHKG2P15735 406 aa5.19□□□□□ -1.58
VPS13D-207ENST00000476169 HSPA6P17066 643 aa5.19□□□□□ -1.58
VPS13D-207ENST00000476169 PTX3P26022 381 aaPredicted RBP5.19□□□□□ -1.58
VPS13D-207ENST00000476169 SERPINB3P29508 390 aa5.19□□□□□ -1.58
VPS13D-207ENST00000476169 HTR3AP46098 478 aa5.19□□□□□ -1.58
VPS13D-207ENST00000476169 SLC6A11P48066 632 aa5.19□□□□□ -1.58
VPS13D-207ENST00000476169 ADCY1Q08828 1119 aa5.19□□□□□ -1.58
VPS13D-207ENST00000476169 STK3Q13188 491 aa5.19□□□□□ -1.58
VPS13D-207ENST00000476169 TUSC3Q13454 348 aa5.19□□□□□ -1.58
VPS13D-207ENST00000476169 GTF2H3Q13889 308 aa5.19□□□□□ -1.58
VPS13D-207ENST00000476169 GBX1Q14549 363 aa5.19□□□□□ -1.58
VPS13D-207ENST00000476169 KIR3DS1Q14943 382 aa5.19□□□□□ -1.58
VPS13D-207ENST00000476169 TMEM132BQ14DG7 1078 aa5.19□□□□□ -1.58
VPS13D-207ENST00000476169 ACAP2Q15057 778 aa5.19□□□□□ -1.58
VPS13D-207ENST00000476169 TMEM95Q3KNT9 176 aa5.19□□□□□ -1.58
VPS13D-207ENST00000476169 IFIT1BQ5T764 474 aaKnown RBP5.19□□□□□ -1.58
VPS13D-207ENST00000476169 CYP4F22Q6NT55 531 aa5.19□□□□□ -1.58
VPS13D-207ENST00000476169 CC2D1AQ6P1N0 951 aaPredicted RBP5.19□□□□□ -1.58
VPS13D-207ENST00000476169 EPM2AIP1Q7L775 607 aaPredicted RBP5.19□□□□□ -1.58
VPS13D-207ENST00000476169 VSIG10LQ86VR7 867 aa5.19□□□□□ -1.58
VPS13D-207ENST00000476169 DCP2Q8IU60 420 aaKnown RBP5.19□□□□□ -1.58
VPS13D-207ENST00000476169 RBM12BQ8IXT5 1001 aaKnown RBP5.19□□□□□ -1.58
VPS13D-207ENST00000476169 AMOTL1Q8IY63 956 aa5.19□□□□□ -1.58
VPS13D-207ENST00000476169 ZZZ3Q8IYH5 903 aa5.19□□□□□ -1.58
VPS13D-207ENST00000476169 IFNL2Q8IZJ0 200 aa5.19□□□□□ -1.58
VPS13D-207ENST00000476169 FAXDC2Q96IV6 333 aa5.19□□□□□ -1.58
VPS13D-207ENST00000476169 ZDHHC5Q9C0B5 715 aa5.19□□□□□ -1.58
VPS13D-207ENST00000476169 AP5M1Q9H0R1 490 aa5.19□□□□□ -1.58
VPS13D-207ENST00000476169 SMOC1Q9H4F8 434 aa5.19□□□□□ -1.58
VPS13D-207ENST00000476169 ZMAT4Q9H898 229 aa5.19□□□□□ -1.58
VPS13D-207ENST00000476169 PRDM7Q9NQW5 492 aa5.19□□□□□ -1.58
VPS13D-207ENST00000476169 SWAP70Q9UH65 585 aa5.19□□□□□ -1.58
VPS13D-207ENST00000476169 PCDHB4Q9Y5E5 795 aa5.19□□□□□ -1.58
VPS13D-207ENST00000476169 NOTOA8MTQ0 251 aa5.18□□□□□ -1.58
VPS13D-207ENST00000476169 FZD9O00144 591 aa5.18□□□□□ -1.58
VPS13D-207ENST00000476169 MAFGO15525 162 aa5.18□□□□□ -1.58
VPS13D-207ENST00000476169 KDM1AO60341 852 aa5.18□□□□□ -1.58
VPS13D-207ENST00000476169 NBNO60934 754 aa5.18□□□□□ -1.58
VPS13D-207ENST00000476169 PRNPP04156 253 aa5.18□□□□□ -1.58
VPS13D-207ENST00000476169 RBP3P10745 1247 aa5.18□□□□□ -1.58
VPS13D-207ENST00000476169 VCAM1P19320 739 aa5.18□□□□□ -1.58
VPS13D-207ENST00000476169 LPOP22079 712 aaPredicted RBP5.18□□□□□ -1.58
VPS13D-207ENST00000476169 BDNFP23560 247 aa5.18□□□□□ -1.58
VPS13D-207ENST00000476169 CD40P25942 277 aa5.18□□□□□ -1.58
VPS13D-207ENST00000476169 GJA4P35212 333 aa5.18□□□□□ -1.58
VPS13D-207ENST00000476169 HALP42357 657 aa5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms