RNA–Protein interactions for RNA: ENST00000474835.5

USP16-205, Transcript of ubiquitin specific peptidase 16, humanhuman

TSL 1 (best)

Gene USP16, Length 3,835 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-205ENST00000474835 PCCAP05165 728 aaPredicted RBP4.5□□□□□ -1.69
USP16-205ENST00000474835 ZFYP08048 801 aaPredicted RBP4.5□□□□□ -1.69
USP16-205ENST00000474835 PLEKP08567 350 aaPredicted RBP4.5□□□□□ -1.69
USP16-205ENST00000474835 GSTA2P09210 222 aa4.5□□□□□ -1.69
USP16-205ENST00000474835 HOXA10P31260 410 aaPredicted RBP4.5□□□□□ -1.69
USP16-205ENST00000474835 SPAG1Q07617 926 aa4.5□□□□□ -1.69
USP16-205ENST00000474835 PPARAQ07869 468 aa4.5□□□□□ -1.69
USP16-205ENST00000474835 PPP2R5BQ15173 497 aa4.5□□□□□ -1.69
USP16-205ENST00000474835 USH1GQ495M9 461 aa4.5□□□□□ -1.69
USP16-205ENST00000474835 TPRNQ4KMQ1 711 aa4.5□□□□□ -1.69
USP16-205ENST00000474835 ZNF362Q5T0B9 420 aaPredicted RBP4.5□□□□□ -1.69
USP16-205ENST00000474835 NFRKBQ6P4R8 1299 aa4.5□□□□□ -1.69
USP16-205ENST00000474835 TRPM8Q7Z2W7 1104 aa4.5□□□□□ -1.69
USP16-205ENST00000474835 CPSF7Q8N684 471 aaKnown RBP4.5□□□□□ -1.69
USP16-205ENST00000474835 DDX54Q8TDD1 881 aaKnown RBP4.5□□□□□ -1.69
USP16-205ENST00000474835 OXER1Q8TDS5 423 aa4.5□□□□□ -1.69
USP16-205ENST00000474835 ADAMTS16Q8TE57 1224 aa4.5□□□□□ -1.69
USP16-205ENST00000474835 C10orf82Q8WW14 230 aa4.5□□□□□ -1.69
USP16-205ENST00000474835 STON2Q8WXE9 905 aa4.5□□□□□ -1.69
USP16-205ENST00000474835 ART4Q93070 314 aa4.5□□□□□ -1.69
USP16-205ENST00000474835 GPATCH3Q96I76 525 aa4.5□□□□□ -1.69
USP16-205ENST00000474835 SMC6Q96SB8 1091 aa4.5□□□□□ -1.69
USP16-205ENST00000474835 SLITRK6Q9H5Y7 841 aa4.5□□□□□ -1.69
USP16-205ENST00000474835 GRID1Q9ULK0 1009 aa4.5□□□□□ -1.69
USP16-205ENST00000474835 PLAAQ9Y263 795 aa4.5□□□□□ -1.69
USP16-205ENST00000474835 RLFQ13129 1914 aa4.5□□□□□ -1.69
USP16-205ENST00000474835 NDUFAB1O14561 156 aa4.5□□□□□ -1.69
USP16-205ENST00000474835 BIRC5O15392 142 aa4.5□□□□□ -1.69
USP16-205ENST00000474835 GABRB3P28472 473 aa4.5□□□□□ -1.69
USP16-205ENST00000474835 KLK7P49862 253 aa4.5□□□□□ -1.69
USP16-205ENST00000474835 NT5C2P49902 561 aa4.5□□□□□ -1.69
USP16-205ENST00000474835 DNM2P50570 870 aa4.5□□□□□ -1.69
USP16-205ENST00000474835 PTENP60484 403 aa4.5□□□□□ -1.69
USP16-205ENST00000474835 PAK2Q13177 524 aa4.5□□□□□ -1.69
USP16-205ENST00000474835 TSHZ1Q6ZSZ6 1077 aa4.5□□□□□ -1.69
USP16-205ENST00000474835 EPM2AIP1Q7L775 607 aaPredicted RBP4.5□□□□□ -1.69
USP16-205ENST00000474835 TDRPQ86YL5 185 aa4.5□□□□□ -1.69
USP16-205ENST00000474835 HOMER1Q86YM7 354 aa4.5□□□□□ -1.69
USP16-205ENST00000474835 STK32AQ8WU08 396 aa4.5□□□□□ -1.69
USP16-205ENST00000474835 APPBP2Q92624 585 aa4.5□□□□□ -1.69
USP16-205ENST00000474835 EGLN2Q96KS0 407 aa4.5□□□□□ -1.69
USP16-205ENST00000474835 DOK1Q99704 481 aa4.5□□□□□ -1.69
USP16-205ENST00000474835 SPATA16Q9BXB7 569 aa4.5□□□□□ -1.69
USP16-205ENST00000474835 OXCT2Q9BYC2 517 aaPredicted RBP4.5□□□□□ -1.69
USP16-205ENST00000474835 KRT23Q9C075 422 aa4.5□□□□□ -1.69
USP16-205ENST00000474835 RAB17Q9H0T7 212 aa4.5□□□□□ -1.69
USP16-205ENST00000474835 MMADHCQ9H3L0 296 aaPredicted RBP4.5□□□□□ -1.69
USP16-205ENST00000474835 NOP53Q9NZM5 478 aaKnown RBP4.5□□□□□ -1.69
USP16-205ENST00000474835 HESX1Q9UBX0 185 aa4.5□□□□□ -1.69
USP16-205ENST00000474835 TMEM98Q9Y2Y6 226 aa4.5□□□□□ -1.69
USP16-205ENST00000474835 SHTN1A0MZ66 631 aa4.5□□□□□ -1.69
USP16-205ENST00000474835 ENC1O14682 589 aa4.5□□□□□ -1.69
USP16-205ENST00000474835 KIAA0391O15091 583 aaKnown RBP4.5□□□□□ -1.69
USP16-205ENST00000474835 DHRS4L1P0CG22 281 aa4.5□□□□□ -1.69
USP16-205ENST00000474835 VCAM1P19320 739 aa4.5□□□□□ -1.69
USP16-205ENST00000474835 COPS2P61201 443 aa4.5□□□□□ -1.69
USP16-205ENST00000474835 KRT83P78385 493 aa4.5□□□□□ -1.69
USP16-205ENST00000474835 TCIRG1Q13488 830 aa4.5□□□□□ -1.69
USP16-205ENST00000474835 SPIDRQ14159 915 aa4.5□□□□□ -1.69
USP16-205ENST00000474835 Q6ZNX1 250 aa4.5□□□□□ -1.69
USP16-205ENST00000474835 ZNF384Q8TF68 577 aa4.5□□□□□ -1.69
USP16-205ENST00000474835 CRYGNQ8WXF5 182 aa4.5□□□□□ -1.69
USP16-205ENST00000474835 DDX12PQ92771 950 aa4.5□□□□□ -1.69
USP16-205ENST00000474835 TMX4Q9H1E5 349 aaPredicted RBP4.5□□□□□ -1.69
USP16-205ENST00000474835 KCNK13Q9HB14 408 aa4.5□□□□□ -1.69
USP16-205ENST00000474835 JADE2Q9NQC1 790 aa4.5□□□□□ -1.69
USP16-205ENST00000474835 SUCLA2Q9P2R7 463 aaPredicted RBP4.5□□□□□ -1.69
USP16-205ENST00000474835 UTP18Q9Y5J1 556 aaKnown RBP eCLIP4.5□□□□□ -1.69
USP16-205ENST00000474835 POLR2DO15514 142 aaKnown RBP4.49□□□□□ -1.69
USP16-205ENST00000474835 SLC26A4O43511 780 aa4.49□□□□□ -1.69
USP16-205ENST00000474835 SKAP2O75563 359 aaPredicted RBP4.49□□□□□ -1.69
USP16-205ENST00000474835 CDKL5O76039 1030 aa4.49□□□□□ -1.69
USP16-205ENST00000474835 ASLP04424 464 aa4.49□□□□□ -1.69
USP16-205ENST00000474835 NF2P35240 595 aa4.49□□□□□ -1.69
USP16-205ENST00000474835 EIF3BP55884 814 aaKnown RBP4.49□□□□□ -1.69
USP16-205ENST00000474835 GALNT2Q10471 571 aa4.49□□□□□ -1.69
USP16-205ENST00000474835 TROAPQ12815 778 aa4.49□□□□□ -1.69
USP16-205ENST00000474835 ORC2Q13416 577 aaPredicted RBP4.49□□□□□ -1.69
USP16-205ENST00000474835 AUHQ13825 339 aaKnown RBP4.49□□□□□ -1.69
USP16-205ENST00000474835 ZNF827Q17R98 1081 aa4.49□□□□□ -1.69
USP16-205ENST00000474835 SLC30A9Q6PML9 568 aa4.49□□□□□ -1.69
USP16-205ENST00000474835 SND1Q7KZF4 910 aaKnown RBP eCLIP4.49□□□□□ -1.69
USP16-205ENST00000474835 ECHDC2Q86YB7 292 aa4.49□□□□□ -1.69
USP16-205ENST00000474835 LZTR1Q8N653 840 aa4.49□□□□□ -1.69
USP16-205ENST00000474835 ZNF398Q8TD17 642 aa4.49□□□□□ -1.69
USP16-205ENST00000474835 MAML1Q92585 1016 aa4.49□□□□□ -1.69
USP16-205ENST00000474835 SPDL1Q96EA4 605 aa4.49□□□□□ -1.69
USP16-205ENST00000474835 EPSTI1Q96J88 318 aa4.49□□□□□ -1.69
USP16-205ENST00000474835 RMDN2Q96LZ7 410 aa4.49□□□□□ -1.69
USP16-205ENST00000474835 STRBPQ96SI9 672 aaKnown RBP4.49□□□□□ -1.69
USP16-205ENST00000474835 CNTN3Q9P232 1028 aa4.49□□□□□ -1.69
USP16-205ENST00000474835 STARD13Q9Y3M8 1113 aa4.49□□□□□ -1.69
USP16-205ENST00000474835 MYLKQ15746 1914 aa4.49□□□□□ -1.69
USP16-205ENST00000474835 COL5A2P05997 1499 aaPredicted RBP4.49□□□□□ -1.69
USP16-205ENST00000474835 CNTNAP2Q9UHC6 1331 aa4.49□□□□□ -1.69
USP16-205ENST00000474835 PATL2C9JE40 543 aaKnown RBP4.49□□□□□ -1.69
USP16-205ENST00000474835 PRPF4O43172 522 aaKnown RBP eCLIP4.49□□□□□ -1.69
USP16-205ENST00000474835 LUC7L3O95232 432 aaKnown RBP4.49□□□□□ -1.69
USP16-205ENST00000474835 SERPINC1P01008 464 aa4.49□□□□□ -1.69
USP16-205ENST00000474835 MSH2P43246 934 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms