RNA–Protein interactions for RNA: ENST00000474647.1

CCDC78-209, Transcript of coiled-coil domain containing 78, humanhuman

TSL 3

Gene CCDC78, Length 506 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-209ENST00000474647 CALM1P0DP23 149 aa16.01■□□□□ 0.15
CCDC78-209ENST00000474647 CALM2P0DP24 149 aa16.01■□□□□ 0.15
CCDC78-209ENST00000474647 CALM3P0DP25 149 aa16.01■□□□□ 0.15
CCDC78-209ENST00000474647 SCG2P13521 617 aa16.01■□□□□ 0.15
CCDC78-209ENST00000474647 DNAJB1P25685 340 aa16.01■□□□□ 0.15
CCDC78-209ENST00000474647 MRE11P49959 708 aa16.01■□□□□ 0.15
CCDC78-209ENST00000474647 GATMP50440 423 aa16.01■□□□□ 0.15
CCDC78-209ENST00000474647 NHLH1Q02575 133 aa16.01■□□□□ 0.15
CCDC78-209ENST00000474647 RNF135Q8IUD6 432 aa16.01■□□□□ 0.15
CCDC78-209ENST00000474647 KLHL23Q8NBE8 558 aa16.01■□□□□ 0.15
CCDC78-209ENST00000474647 P2RX5Q93086 422 aa16.01■□□□□ 0.15
CCDC78-209ENST00000474647 TMEM87BQ96K49 555 aa16.01■□□□□ 0.15
CCDC78-209ENST00000474647 PCYT2Q99447 389 aa16.01■□□□□ 0.15
CCDC78-209ENST00000474647 SDF4Q9BRK5 362 aa16.01■□□□□ 0.15
CCDC78-209ENST00000474647 PADI3Q9ULW8 664 aa16.01■□□□□ 0.15
CCDC78-209ENST00000474647 SLC12A7Q9Y666 1083 aa16.01■□□□□ 0.15
CCDC78-209ENST00000474647 IGSF9BQ9UPX0 1349 aa16■□□□□ 0.15
CCDC78-209ENST00000474647 PPFIA3O75145 1194 aa16■□□□□ 0.15
CCDC78-209ENST00000474647 NRIP1P48552 1158 aa16■□□□□ 0.15
CCDC78-209ENST00000474647 ADAM15Q13444 863 aa16■□□□□ 0.15
CCDC78-209ENST00000474647 CAMK1Q14012 370 aa16■□□□□ 0.15
CCDC78-209ENST00000474647 PLCB4Q15147 1175 aa16■□□□□ 0.15
CCDC78-209ENST00000474647 TMEM266Q2M3C6 531 aa16■□□□□ 0.15
CCDC78-209ENST00000474647 SPOUT1Q5T280 376 aaKnown RBP16■□□□□ 0.15
CCDC78-209ENST00000474647 RBM23Q86U06 439 aaKnown RBP16■□□□□ 0.15
CCDC78-209ENST00000474647 RTN4RL1Q86UN2 441 aaPredicted RBP16■□□□□ 0.15
CCDC78-209ENST00000474647 MICU3Q86XE3 530 aa16■□□□□ 0.15
CCDC78-209ENST00000474647 TMTC2Q8N394 836 aa16■□□□□ 0.15
CCDC78-209ENST00000474647 TNPO1Q92973 898 aaKnown RBP16■□□□□ 0.15
CCDC78-209ENST00000474647 PGBD1Q96JS3 809 aa16■□□□□ 0.15
CCDC78-209ENST00000474647 LRRC2Q9BYS8 371 aa16■□□□□ 0.15
CCDC78-209ENST00000474647 KCNH7Q9NS40 1196 aa16■□□□□ 0.15
CCDC78-209ENST00000474647 GINS2Q9Y248 185 aa16■□□□□ 0.15
CCDC78-209ENST00000474647 MAFGO15525 162 aa15.99■□□□□ 0.15
CCDC78-209ENST00000474647 ACTR2P61160 394 aa15.99■□□□□ 0.15
CCDC78-209ENST00000474647 NFX1Q12986 1120 aaKnown RBP15.99■□□□□ 0.15
CCDC78-209ENST00000474647 COL9A3Q14050 684 aaPredicted RBP15.99■□□□□ 0.15
CCDC78-209ENST00000474647 HERC4Q5GLZ8 1057 aaPredicted RBP15.99■□□□□ 0.15
CCDC78-209ENST00000474647 TMTC3Q6ZXV5 915 aa15.99■□□□□ 0.15
CCDC78-209ENST00000474647 SPPL3Q8TCT6 385 aa15.99■□□□□ 0.15
CCDC78-209ENST00000474647 POF1BQ8WVV4 589 aa15.99■□□□□ 0.15
CCDC78-209ENST00000474647 MFSD14AQ96MC6 490 aa15.99■□□□□ 0.15
CCDC78-209ENST00000474647 MXRA8Q9BRK3 442 aa15.99■□□□□ 0.15
CCDC78-209ENST00000474647 MTA3Q9BTC8 594 aa15.99■□□□□ 0.15
CCDC78-209ENST00000474647 CELF4Q9BZC1 486 aaKnown RBP15.99■□□□□ 0.15
CCDC78-209ENST00000474647 BARX2Q9UMQ3 279 aaPredicted RBP15.99■□□□□ 0.15
CCDC78-209ENST00000474647 PCDHGC5Q9Y5F6 944 aa15.99■□□□□ 0.15
CCDC78-209ENST00000474647 PCDHA2Q9Y5H9 948 aa15.99■□□□□ 0.15
CCDC78-209ENST00000474647 SQORQ9Y6N5 450 aa15.99■□□□□ 0.15
CCDC78-209ENST00000474647 USP34Q70CQ2 3546 aa15.99■□□□□ 0.15
CCDC78-209ENST00000474647 DDX39AO00148 427 aaKnown RBP15.98■□□□□ 0.15
CCDC78-209ENST00000474647 STAT5BP51692 787 aa15.98■□□□□ 0.15
CCDC78-209ENST00000474647 NAPAP54920 295 aa15.98■□□□□ 0.15
CCDC78-209ENST00000474647 KRT76Q01546 638 aa15.98■□□□□ 0.15
CCDC78-209ENST00000474647 NAALADL2Q58DX5 795 aa15.98■□□□□ 0.15
CCDC78-209ENST00000474647 CYP2W1Q8TAV3 490 aa15.98■□□□□ 0.15
CCDC78-209ENST00000474647 MSLNLQ96KJ4 702 aa15.98■□□□□ 0.15
CCDC78-209ENST00000474647 KCNH6Q9H252 994 aa15.98■□□□□ 0.15
CCDC78-209ENST00000474647 MYO10Q9HD67 2058 aa15.98■□□□□ 0.15
CCDC78-209ENST00000474647 NFASCO94856 1347 aa15.97■□□□□ 0.15
CCDC78-209ENST00000474647 ARP10275 920 aa15.97■□□□□ 0.15
CCDC78-209ENST00000474647 LIFRP42702 1097 aa15.97■□□□□ 0.15
CCDC78-209ENST00000474647 WWC2Q6AWC2 1192 aa15.97■□□□□ 0.15
CCDC78-209ENST00000474647 MTHFD1LQ6UB35 978 aa15.97■□□□□ 0.15
CCDC78-209ENST00000474647 PLPPR4Q7Z2D5 763 aa15.97■□□□□ 0.15
CCDC78-209ENST00000474647 CRIPAKQ8N1N5 446 aa15.97■□□□□ 0.15
CCDC78-209ENST00000474647 EFHBQ8N7U6 833 aa15.97■□□□□ 0.15
CCDC78-209ENST00000474647 FANCBQ8NB91 859 aa15.97■□□□□ 0.15
CCDC78-209ENST00000474647 SMRP1Q8NCR6 262 aa15.97■□□□□ 0.15
CCDC78-209ENST00000474647 MICAL1Q8TDZ2 1067 aa15.97■□□□□ 0.15
CCDC78-209ENST00000474647 PPP1R16BQ96T49 567 aa15.97■□□□□ 0.15
CCDC78-209ENST00000474647 TMX1Q9H3N1 280 aa15.97■□□□□ 0.15
CCDC78-209ENST00000474647 CLEC1BQ9P126 229 aa15.97■□□□□ 0.15
CCDC78-209ENST00000474647 PCDHB7Q9Y5E2 793 aa15.97■□□□□ 0.15
CCDC78-209ENST00000474647 CNTNAP5Q8WYK1 1306 aa15.96■□□□□ 0.15
CCDC78-209ENST00000474647 SMIM35A0A1B0GVV1 85 aa15.96■□□□□ 0.15
CCDC78-209ENST00000474647 DENND3A2RUS2 1198 aa15.96■□□□□ 0.15
CCDC78-209ENST00000474647 BACH1O14867 736 aa15.96■□□□□ 0.15
CCDC78-209ENST00000474647 SLC27A2O14975 620 aa15.96■□□□□ 0.15
CCDC78-209ENST00000474647 EYA4O95677 639 aa15.96■□□□□ 0.15
CCDC78-209ENST00000474647 GLP2RO95838 553 aa15.96■□□□□ 0.15
CCDC78-209ENST00000474647 SARSP49591 514 aaKnown RBP15.96■□□□□ 0.15
CCDC78-209ENST00000474647 ADCY7P51828 1080 aa15.96■□□□□ 0.15
CCDC78-209ENST00000474647 ITGB3BPQ13352 177 aaPredicted RBP15.96■□□□□ 0.15
CCDC78-209ENST00000474647 SYNE3Q6ZMZ3 975 aa15.96■□□□□ 0.15
CCDC78-209ENST00000474647 EDAQ92838 391 aa15.96■□□□□ 0.15
CCDC78-209ENST00000474647 ANO3Q9BYT9 981 aa15.96■□□□□ 0.15
CCDC78-209ENST00000474647 LSG1Q9H089 658 aaKnown RBP15.96■□□□□ 0.15
CCDC78-209ENST00000474647 TLE6Q9H808 572 aa15.96■□□□□ 0.15
CCDC78-209ENST00000474647 PCDHB12Q9Y5F1 795 aa15.96■□□□□ 0.15
CCDC78-209ENST00000474647 KDM3AQ9Y4C1 1321 aa15.95■□□□□ 0.14
CCDC78-209ENST00000474647 TBKBP1A7MCY6 615 aa15.95■□□□□ 0.14
CCDC78-209ENST00000474647 PER2O15055 1255 aa15.95■□□□□ 0.14
CCDC78-209ENST00000474647 MGEA5O60502 916 aa15.95■□□□□ 0.14
CCDC78-209ENST00000474647 RPS6KA5O75582 802 aa15.95■□□□□ 0.14
CCDC78-209ENST00000474647 KLRC1P26715 233 aa15.95■□□□□ 0.14
CCDC78-209ENST00000474647 ZNF76P36508 570 aa15.95■□□□□ 0.14
CCDC78-209ENST00000474647 COASYQ13057 564 aa15.95■□□□□ 0.14
CCDC78-209ENST00000474647 CEP55Q53EZ4 464 aa15.95■□□□□ 0.14
CCDC78-209ENST00000474647 FAM160B1Q5W0V3 765 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms