RNA–Protein interactions for RNA: ENST00000474455.1

SMIM11A-204, Transcript of small integral membrane protein 11A, humanhuman

TSL 1 (best)

Gene SMIM11A, Length 1,857 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-204ENST00000474455 CYP2B6P20813 491 aa23.06■■□□□ 1.28
SMIM11A-204ENST00000474455 PSMC4P43686 418 aa23.06■■□□□ 1.28
SMIM11A-204ENST00000474455 MAP2K5Q13163 448 aa23.06■■□□□ 1.28
SMIM11A-204ENST00000474455 PPP2R5CQ13362 524 aa23.06■■□□□ 1.28
SMIM11A-204ENST00000474455 CCL14Q16627 93 aa23.06■■□□□ 1.28
SMIM11A-204ENST00000474455 USP6NLQ92738 828 aa23.06■■□□□ 1.28
SMIM11A-204ENST00000474455 TEKT3Q9BXF9 490 aa23.06■■□□□ 1.28
SMIM11A-204ENST00000474455 RAB34Q9BZG1 259 aa23.06■■□□□ 1.28
SMIM11A-204ENST00000474455 UBXN6Q9BZV1 441 aa23.06■■□□□ 1.28
SMIM11A-204ENST00000474455 INTS13Q9NVM9 706 aa23.06■■□□□ 1.28
SMIM11A-204ENST00000474455 RGL1Q9NZL6 768 aa23.06■■□□□ 1.28
SMIM11A-204ENST00000474455 MAN1B1Q9UKM7 699 aa23.06■■□□□ 1.28
SMIM11A-204ENST00000474455 MYH9P35579 1960 aaKnown RBP23.06■■□□□ 1.28
SMIM11A-204ENST00000474455 PLCG1P19174 1290 aa23.05■■□□□ 1.28
SMIM11A-204ENST00000474455 SARSP49591 514 aaKnown RBP23.05■■□□□ 1.28
SMIM11A-204ENST00000474455 POSTNQ15063 836 aa23.05■■□□□ 1.28
SMIM11A-204ENST00000474455 LY6KQ17RY6 165 aa23.05■■□□□ 1.28
SMIM11A-204ENST00000474455 RASSF8Q8NHQ8 419 aa23.05■■□□□ 1.28
SMIM11A-204ENST00000474455 RIT2Q99578 217 aa23.05■■□□□ 1.28
SMIM11A-204ENST00000474455 GABRQQ9UN88 632 aa23.05■■□□□ 1.28
SMIM11A-204ENST00000474455 POTEB3A0JP26 581 aa23.05■■□□□ 1.28
SMIM11A-204ENST00000474455 SNAI1O95863 264 aaPredicted RBP23.05■■□□□ 1.28
SMIM11A-204ENST00000474455 CASP1P29466 404 aa23.05■■□□□ 1.28
SMIM11A-204ENST00000474455 CYP4A11Q02928 519 aa23.05■■□□□ 1.28
SMIM11A-204ENST00000474455 MORC3Q14149 939 aa23.05■■□□□ 1.28
SMIM11A-204ENST00000474455 GNPTABQ3T906 1256 aa23.05■■□□□ 1.28
SMIM11A-204ENST00000474455 KRT79Q5XKE5 535 aa23.05■■□□□ 1.28
SMIM11A-204ENST00000474455 POTEBQ6S5H4 581 aa23.05■■□□□ 1.28
SMIM11A-204ENST00000474455 KCNK18Q7Z418 384 aa23.05■■□□□ 1.28
SMIM11A-204ENST00000474455 MTRQ99707 1265 aa23.05■■□□□ 1.28
SMIM11A-204ENST00000474455 ASB14A6NK59 587 aa23.04■■□□□ 1.28
SMIM11A-204ENST00000474455 CCNE2O96020 404 aa23.04■■□□□ 1.28
SMIM11A-204ENST00000474455 SPATA31C1P0DKV0 1188 aa23.04■■□□□ 1.28
SMIM11A-204ENST00000474455 ERCC5P28715 1186 aaPredicted RBP23.04■■□□□ 1.28
SMIM11A-204ENST00000474455 ICAM3P32942 547 aa23.04■■□□□ 1.28
SMIM11A-204ENST00000474455 TXLNAP40222 546 aa23.04■■□□□ 1.28
SMIM11A-204ENST00000474455 SP4Q02446 784 aa23.04■■□□□ 1.28
SMIM11A-204ENST00000474455 CATSPER3Q86XQ3 398 aa23.04■■□□□ 1.28
SMIM11A-204ENST00000474455 RABGGTAQ92696 567 aa23.04■■□□□ 1.28
SMIM11A-204ENST00000474455 CCDC34Q96HJ3 373 aa23.04■■□□□ 1.28
SMIM11A-204ENST00000474455 EIF2AK1Q9BQI3 630 aaKnown RBP23.04■■□□□ 1.28
SMIM11A-204ENST00000474455 MRFAP1Q9Y605 127 aa23.04■■□□□ 1.28
SMIM11A-204ENST00000474455 MAFGO15525 162 aa23.03■■□□□ 1.28
SMIM11A-204ENST00000474455 PRR29P0C7W0 189 aa23.03■■□□□ 1.28
SMIM11A-204ENST00000474455 HSPA6P17066 643 aa23.03■■□□□ 1.28
SMIM11A-204ENST00000474455 CCT6AP40227 531 aaKnown RBP23.03■■□□□ 1.28
SMIM11A-204ENST00000474455 GNG11P61952 73 aa23.03■■□□□ 1.28
SMIM11A-204ENST00000474455 TUBB4BP68371 445 aa23.03■■□□□ 1.28
SMIM11A-204ENST00000474455 SP3Q02447 781 aa23.03■■□□□ 1.28
SMIM11A-204ENST00000474455 RRAGBQ5VZM2 374 aa23.03■■□□□ 1.28
SMIM11A-204ENST00000474455 PDXDC2PQ6P474 469 aa23.03■■□□□ 1.28
SMIM11A-204ENST00000474455 RSRC2Q7L4I2 434 aaKnown RBP23.03■■□□□ 1.28
SMIM11A-204ENST00000474455 CYFIP1Q7L576 1253 aa23.03■■□□□ 1.28
SMIM11A-204ENST00000474455 TC2NQ8N9U0 490 aa23.03■■□□□ 1.28
SMIM11A-204ENST00000474455 SMARCE1Q969G3 411 aa23.03■■□□□ 1.28
SMIM11A-204ENST00000474455 CDK11BP21127 795 aaKnown RBP23.02■■□□□ 1.28
SMIM11A-204ENST00000474455 BMP6P22004 513 aa23.02■■□□□ 1.28
SMIM11A-204ENST00000474455 STAT6P42226 847 aa23.02■■□□□ 1.28
SMIM11A-204ENST00000474455 AFMP43652 599 aa23.02■■□□□ 1.28
SMIM11A-204ENST00000474455 C1QTNF8P60827 252 aa23.02■■□□□ 1.28
SMIM11A-204ENST00000474455 TUBB2AQ13885 445 aa23.02■■□□□ 1.28
SMIM11A-204ENST00000474455 CTTNQ14247 550 aaKnown RBP23.02■■□□□ 1.28
SMIM11A-204ENST00000474455 PRAMEF19Q5SWL8 479 aa23.02■■□□□ 1.28
SMIM11A-204ENST00000474455 DYDC2Q96IM9 177 aa23.02■■□□□ 1.28
SMIM11A-204ENST00000474455 PANX2Q96RD6 677 aa23.02■■□□□ 1.28
SMIM11A-204ENST00000474455 TUBB2BQ9BVA1 445 aa23.02■■□□□ 1.28
SMIM11A-204ENST00000474455 NAA15Q9BXJ9 866 aaKnown RBP23.02■■□□□ 1.28
SMIM11A-204ENST00000474455 KATNBL1Q9H079 304 aa23.02■■□□□ 1.28
SMIM11A-204ENST00000474455 TBC1D22BQ9NU19 505 aa23.02■■□□□ 1.28
SMIM11A-204ENST00000474455 CDKN2AIPQ9NXV6 580 aaPredicted RBP23.02■■□□□ 1.28
SMIM11A-204ENST00000474455 WRAP73Q9P2S5 460 aaPredicted RBP23.02■■□□□ 1.28
SMIM11A-204ENST00000474455 TSKSQ9UJT2 592 aa23.02■■□□□ 1.28
SMIM11A-204ENST00000474455 DIS3Q9Y2L1 958 aaKnown RBP23.02■■□□□ 1.28
SMIM11A-204ENST00000474455 B4DLN1 442 aa23.02■■□□□ 1.28
SMIM11A-204ENST00000474455 FANCGO15287 622 aa23.02■■□□□ 1.28
SMIM11A-204ENST00000474455 UBA1P22314 1058 aaKnown RBP23.02■■□□□ 1.28
SMIM11A-204ENST00000474455 PSMC6P62333 389 aa23.02■■□□□ 1.28
SMIM11A-204ENST00000474455 PPP2R3AQ06190 1150 aa23.02■■□□□ 1.28
SMIM11A-204ENST00000474455 TAPT1Q6NXT6 567 aa23.02■■□□□ 1.28
SMIM11A-204ENST00000474455 MAMDC4Q6UXC1 1216 aa23.02■■□□□ 1.28
SMIM11A-204ENST00000474455 ZNF467Q7Z7K2 595 aaPredicted RBP23.02■■□□□ 1.28
SMIM11A-204ENST00000474455 IQUBQ8NA54 791 aa23.02■■□□□ 1.28
SMIM11A-204ENST00000474455 COPS5Q92905 334 aa23.02■■□□□ 1.28
SMIM11A-204ENST00000474455 TINF2Q9BSI4 451 aa23.02■■□□□ 1.28
SMIM11A-204ENST00000474455 CFHR5Q9BXR6 569 aa23.02■■□□□ 1.28
SMIM11A-204ENST00000474455 BLOC1S4Q9NUP1 217 aa23.02■■□□□ 1.28
SMIM11A-204ENST00000474455 ZKSCAN7Q9P0L1 754 aaPredicted RBP23.02■■□□□ 1.28
SMIM11A-204ENST00000474455 KIAA1024Q9UPX6 916 aa23.02■■□□□ 1.28
SMIM11A-204ENST00000474455 POTEFA5A3E0 1075 aa23.01■■□□□ 1.27
SMIM11A-204ENST00000474455 SLITRK3O94933 977 aa23.01■■□□□ 1.27
SMIM11A-204ENST00000474455 GJC2Q5T442 439 aaPredicted RBP23.01■■□□□ 1.27
SMIM11A-204ENST00000474455 POTEGQ6S5H5 508 aa23.01■■□□□ 1.27
SMIM11A-204ENST00000474455 CALML4Q96GE6 196 aa23.01■■□□□ 1.27
SMIM11A-204ENST00000474455 CDHR1Q96JP9 859 aa23.01■■□□□ 1.27
SMIM11A-204ENST00000474455 MPHOSPH6Q99547 160 aaKnown RBP23.01■■□□□ 1.27
SMIM11A-204ENST00000474455 HSD17B14Q9BPX1 270 aa23.01■■□□□ 1.27
SMIM11A-204ENST00000474455 ST7Q9NRC1 585 aa23.01■■□□□ 1.27
SMIM11A-204ENST00000474455 NFE2L3Q9Y4A8 694 aa23.01■■□□□ 1.27
SMIM11A-204ENST00000474455 E9PMD0 336 aa23■■□□□ 1.27
SMIM11A-204ENST00000474455 ZBTB39O15060 712 aa23■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms