RNA–Protein interactions for RNA: ENST00000474432.1

COL7A1-209, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 3

Gene COL7A1, Length 728 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-209ENST00000474432 POTEBQ6S5H4 581 aa21.1■□□□□ 0.97
COL7A1-209ENST00000474432 CCDC148Q8NFR7 591 aa21.1■□□□□ 0.97
COL7A1-209ENST00000474432 ASB2Q96Q27 587 aa21.1■□□□□ 0.97
COL7A1-209ENST00000474432 C17orf80Q9BSJ5 609 aa21.1■□□□□ 0.97
COL7A1-209ENST00000474432 ZNF577Q9BSK1 485 aa21.1■□□□□ 0.97
COL7A1-209ENST00000474432 FAM49AQ9H0Q0 323 aaPredicted RBP21.1■□□□□ 0.97
COL7A1-209ENST00000474432 MTUS1Q9ULD2 1270 aa21.1■□□□□ 0.97
COL7A1-209ENST00000474432 BRWD1Q9NSI6 2320 aa21.09■□□□□ 0.97
COL7A1-209ENST00000474432 M0R2N6 131 aa21.09■□□□□ 0.97
COL7A1-209ENST00000474432 PRR16Q569H4 304 aa21.09■□□□□ 0.97
COL7A1-209ENST00000474432 SWSAP1Q6NVH7 229 aa21.09■□□□□ 0.97
COL7A1-209ENST00000474432 MTHFD1LQ6UB35 978 aa21.09■□□□□ 0.97
COL7A1-209ENST00000474432 RSPH3Q86UC2 560 aa21.09■□□□□ 0.97
COL7A1-209ENST00000474432 BICD2Q8TD16 824 aa21.09■□□□□ 0.97
COL7A1-209ENST00000474432 ATP8B4Q8TF62 1192 aa21.09■□□□□ 0.97
COL7A1-209ENST00000474432 LINC01599Q8WXQ3 324 aa21.09■□□□□ 0.97
COL7A1-209ENST00000474432 AIFM3Q96NN9 605 aa21.09■□□□□ 0.97
COL7A1-209ENST00000474432 TBC1D22BQ9NU19 505 aa21.09■□□□□ 0.97
COL7A1-209ENST00000474432 PDRG1Q9NUG6 133 aa21.09■□□□□ 0.97
COL7A1-209ENST00000474432 NLRC5Q86WI3 1866 aa21.09■□□□□ 0.97
COL7A1-209ENST00000474432 SMIM35A0A1B0GVV1 85 aa21.08■□□□□ 0.97
COL7A1-209ENST00000474432 ENPP3O14638 875 aa21.08■□□□□ 0.97
COL7A1-209ENST00000474432 GTPBP6O43824 516 aaPredicted RBP21.08■□□□□ 0.97
COL7A1-209ENST00000474432 UPP2O95045 317 aa21.08■□□□□ 0.97
COL7A1-209ENST00000474432 SETQ01105 290 aaPredicted RBP21.08■□□□□ 0.97
COL7A1-209ENST00000474432 SSRP1Q08945 709 aaKnown RBP21.08■□□□□ 0.97
COL7A1-209ENST00000474432 TMEM62Q0P6H9 643 aa21.08■□□□□ 0.97
COL7A1-209ENST00000474432 ERICH6BQ5W0A0 696 aa21.08■□□□□ 0.97
COL7A1-209ENST00000474432 ZNF746Q6NUN9 644 aaPredicted RBP21.08■□□□□ 0.97
COL7A1-209ENST00000474432 TSHZ1Q6ZSZ6 1077 aa21.08■□□□□ 0.97
COL7A1-209ENST00000474432 RTN4RL1Q86UN2 441 aaPredicted RBP21.08■□□□□ 0.97
COL7A1-209ENST00000474432 ZNF302Q9NR11 478 aa21.08■□□□□ 0.97
COL7A1-209ENST00000474432 MAFBQ9Y5Q3 323 aaPredicted RBP21.08■□□□□ 0.97
COL7A1-209ENST00000474432 NCOR1O75376 2440 aa21.07■□□□□ 0.96
COL7A1-209ENST00000474432 XIRP2A4UGR9 3374 aa21.07■□□□□ 0.96
COL7A1-209ENST00000474432 BACH1O14867 736 aa21.07■□□□□ 0.96
COL7A1-209ENST00000474432 MSH4O15457 936 aa21.07■□□□□ 0.96
COL7A1-209ENST00000474432 HBP1O60381 514 aa21.07■□□□□ 0.96
COL7A1-209ENST00000474432 LINC00271P0C7V0 271 aa21.07■□□□□ 0.96
COL7A1-209ENST00000474432 KLRC1P26715 233 aa21.07■□□□□ 0.96
COL7A1-209ENST00000474432 MRPS5P82675 430 aaKnown RBP21.07■□□□□ 0.96
COL7A1-209ENST00000474432 TFF2Q03403 129 aa21.07■□□□□ 0.96
COL7A1-209ENST00000474432 STK3Q13188 491 aa21.07■□□□□ 0.96
COL7A1-209ENST00000474432 MIS18BP1Q6P0N0 1132 aa21.07■□□□□ 0.96
COL7A1-209ENST00000474432 CRIPAKQ8N1N5 446 aa21.07■□□□□ 0.96
COL7A1-209ENST00000474432 RC3H2Q9HBD1 1191 aaKnown RBP21.07■□□□□ 0.96
COL7A1-209ENST00000474432 LMCD1Q9NZU5 365 aa21.07■□□□□ 0.96
COL7A1-209ENST00000474432 PCDHA4Q9UN74 947 aa21.07■□□□□ 0.96
COL7A1-209ENST00000474432 SQORQ9Y6N5 450 aa21.07■□□□□ 0.96
COL7A1-209ENST00000474432 KDM3AQ9Y4C1 1321 aa21.06■□□□□ 0.96
COL7A1-209ENST00000474432 DTNBO60941 627 aa21.06■□□□□ 0.96
COL7A1-209ENST00000474432 DEXIO95424 95 aa21.06■□□□□ 0.96
COL7A1-209ENST00000474432 RPLP2P05387 115 aaKnown RBP21.06■□□□□ 0.96
COL7A1-209ENST00000474432 CD52P31358 61 aa21.06■□□□□ 0.96
COL7A1-209ENST00000474432 USP11P51784 963 aa21.06■□□□□ 0.96
COL7A1-209ENST00000474432 NLRP5P59047 1200 aa21.06■□□□□ 0.96
COL7A1-209ENST00000474432 SCRN1Q12765 414 aa21.06■□□□□ 0.96
COL7A1-209ENST00000474432 IER5Q5VY09 327 aa21.06■□□□□ 0.96
COL7A1-209ENST00000474432 FAM160B1Q5W0V3 765 aa21.06■□□□□ 0.96
COL7A1-209ENST00000474432 PDXDC2PQ6P474 469 aa21.06■□□□□ 0.96
COL7A1-209ENST00000474432 TRIM22Q8IYM9 498 aa21.06■□□□□ 0.96
COL7A1-209ENST00000474432 KIAA0319LQ8IZA0 1049 aa21.06■□□□□ 0.96
COL7A1-209ENST00000474432 SYMPKQ92797 1274 aaKnown RBP21.06■□□□□ 0.96
COL7A1-209ENST00000474432 TNPO1Q92973 898 aaKnown RBP21.06■□□□□ 0.96
COL7A1-209ENST00000474432 IL17RAQ96F46 866 aa21.06■□□□□ 0.96
COL7A1-209ENST00000474432 CELF4Q9BZC1 486 aaKnown RBP21.06■□□□□ 0.96
COL7A1-209ENST00000474432 TRPV2Q9Y5S1 764 aa21.06■□□□□ 0.96
COL7A1-209ENST00000474432 COL1A2P08123 1366 aa21.06■□□□□ 0.96
COL7A1-209ENST00000474432 MUC3AQ02505 3323 aa21.06■□□□□ 0.96
COL7A1-209ENST00000474432 IGSF9BQ9UPX0 1349 aa21.05■□□□□ 0.96
COL7A1-209ENST00000474432 RALGAPA2Q2PPJ7 1873 aa21.05■□□□□ 0.96
COL7A1-209ENST00000474432 TCF20Q9UGU0 1960 aaKnown RBP21.05■□□□□ 0.96
COL7A1-209ENST00000474432 KRT76Q01546 638 aa21.05■□□□□ 0.96
COL7A1-209ENST00000474432 SMAP1Q8IYB5 467 aaPredicted RBP21.05■□□□□ 0.96
COL7A1-209ENST00000474432 DAGLBQ8NCG7 672 aa21.05■□□□□ 0.96
COL7A1-209ENST00000474432 TBCKQ8TEA7 893 aa21.05■□□□□ 0.96
COL7A1-209ENST00000474432 SLC5A5Q92911 643 aa21.05■□□□□ 0.96
COL7A1-209ENST00000474432 YME1L1Q96TA2 773 aa21.05■□□□□ 0.96
COL7A1-209ENST00000474432 CDHR5Q9HBB8 845 aa21.05■□□□□ 0.96
COL7A1-209ENST00000474432 TPCN1Q9ULQ1 816 aa21.05■□□□□ 0.96
COL7A1-209ENST00000474432 ZNF862O60290 1169 aa21.04■□□□□ 0.96
COL7A1-209ENST00000474432 BMP1P13497 986 aa21.04■□□□□ 0.96
COL7A1-209ENST00000474432 EPC2Q52LR7 807 aa21.04■□□□□ 0.96
COL7A1-209ENST00000474432 ZNF484Q5JVG2 852 aa21.04■□□□□ 0.96
COL7A1-209ENST00000474432 BLIDQ8IZY5 108 aa21.04■□□□□ 0.96
COL7A1-209ENST00000474432 NME8Q8N427 588 aa21.04■□□□□ 0.96
COL7A1-209ENST00000474432 FBXO22Q8NEZ5 403 aa21.04■□□□□ 0.96
COL7A1-209ENST00000474432 GJA10Q969M2 543 aa21.04■□□□□ 0.96
COL7A1-209ENST00000474432 MBOAT7Q96N66 472 aa21.04■□□□□ 0.96
COL7A1-209ENST00000474432 PADI3Q9ULW8 664 aa21.04■□□□□ 0.96
COL7A1-209ENST00000474432 PCDHA10Q9Y5I2 948 aa21.04■□□□□ 0.96
COL7A1-209ENST00000474432 ATG2AQ2TAZ0 1938 aa21.04■□□□□ 0.96
COL7A1-209ENST00000474432 CYP3A7-CYP3A51PA0A087WV96 503 aa21.03■□□□□ 0.96
COL7A1-209ENST00000474432 CPLX1O14810 134 aa21.03■□□□□ 0.96
COL7A1-209ENST00000474432 CTDNEP1O95476 244 aa21.03■□□□□ 0.96
COL7A1-209ENST00000474432 C22orf31O95567 290 aa21.03■□□□□ 0.96
COL7A1-209ENST00000474432 CYP3A7P24462 503 aa21.03■□□□□ 0.96
COL7A1-209ENST00000474432 B3GNT9Q6UX72 402 aa21.03■□□□□ 0.96
COL7A1-209ENST00000474432 TMEM40Q8WWA1 233 aa21.03■□□□□ 0.96
COL7A1-209ENST00000474432 BBXQ8WY36 941 aaPredicted RBP21.03■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms